Antechinus flavipes (yellow-footed antechinus): 127549938
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Entry
127549938 CDS
T08818
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127549938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127549938
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127549938
microRNA pathway
RISC loading complex
127549938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
SLFN-g3_helicase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
127549938
NCBI-ProteinID:
XP_051834396
LinkDB
All DBs
Position
2:385269541..385361961
Genome browser
AA seq
1923 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNGKRTVFLVNSANQVAQQASAVRTHSDLK
VGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQVALNVLKNDYLSLSNINLLVFDECHLA
ILDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDTSGLYERLLKELDEALNFLNDCNISVHSKEKDSILISK
QILSDCRAVLVVLGPWCTDKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADSDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETE
TEPIVDDDDIFPPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELSD
GTFYSTLYLPINSPLRAAIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVNDSSTLDIDFKFMDDI
EKSEARTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPNSSLAENENYCKHSTIVVPENAAHQGTNR
TSSLENHDQMSVTCRSLFSESPNKIQIEVSTELTAINGISYNKNLANGSYDLVNRDFCQG
NQLNYYRQEIPVQPTTSYPIQNLYNSENQPKPNNECTLLSNKYLDGNANKSTSDGCPTKA
VTVTTNTSETSITSKGRIDSEQSPSNGYSSKTLGPNPGLILQALTLSNASDGFNLERLEM
LGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPP
VNWLPPGYIVNQDKSNTDKWEKDEMTKDNMLANGKLDEDYDEEEDEDLMWRVPKEEVDYE
DDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTNDSNYEWKMPKKSSLGNIPFSSDID
DFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDTGKQSISYDLHTEQCIADKSI
ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWENTLYPSKDNFNSQQKNLSV
NFASISVANLQSSLYKDLEYGCLKIPPRCMFDYPDAEKTLNHLISGFENFEKKINYNFKN
KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL
VNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE
EDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLE
MEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQV
PNS
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggactacagctcatgacccctgct
tcttcaccaatgggtcctttttttggactaccatggcaacaagaagcaattcacgataac
atttacaccccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacg
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggaaatttcaacagaaatggaaaaaggacggtgttcttggtc
aactctgcaaaccaagttgctcagcaagcatcagctgtcagaacgcattcagatctcaag
gttggagaatattcaagcttagaaattagtgcatcttggacaaaggagaaatggaaccaa
gagtttattaaacaccaggttctggttatgacctgtcaagttgccttgaatgttttgaaa
aatgattacttatcactatccaacattaatctgttggtatttgatgagtgtcatcttgca
atcctggaccatccctatagagaaattatgaagatctgtgaagattatccatcatgtcct
cgaattttgggattaactgcttctattttaaatgggaagtgtgatcctgcagaattagag
gagaagattcagaaactggagaaaatccttaagagtaatgctgaaactgcaactgatttg
gtagtcttagacagatatacttctcaaccatgtgagattgtggtagattgtggaccatat
actgatactagtgggctctatgaaaggctgctaaaggaattggatgaagcacttaatttt
ctcaatgactgcaacatatctgtgcattcaaaagaaaaggattctatattaatttctaaa
cagattctttcagactgccgagcagtattggtggttctgggaccctggtgtacagataag
gtagctggaatgatggtaagagaacttcagaaatatatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgttacgccgaaagtaataaaactg
cttgaaattttacgtaaatataaaccatatgagcggcagcagtttgagagcgttgaatgg
tataataataggaatcaagataattatgtatcttggagtgattctgaagatgatgatgag
gatgaagaaattgaagaaaaagagaagccagagacaaattttccctctccatttaccaat
attttatgtggtattatttttgtggagagaagatatacagcagttgttttaaacagattg
ataaaagaagctggcaaacaagatccagagctggcttatattagcagcaattttataact
ggacatggcattggaaagaatcagcctcgtaacaaacagatggaagtggaattcagaaaa
caggaagaggtacttaggaaatttagggcacatgaaaccaaccttcttattgcaaccagt
attgtagaggaaggtgttgacataccaaaatgcaacttggtggttcgttttgatttgccc
acggaatatcgatcttatgtacaatccaagggaagggcaagggcacccatctctaattat
attatgctagctgattcagacaaaataaaaagttttgaagaagatctcaaaacctacaaa
gctattgaaaagatattaagaaataaatgttcgaagtcagttgatactggtgagactgaa
actgaacctattgtggatgatgatgacattttcccaccatatgttttgaggccagatgat
ggaagtccaagagtcacaattaatacagccattggacacataaatagatattgtgcaaga
ttaccaagtgatccatttactcatctagctcctaagtgtaaaacccgggaattgtcagat
ggtacattttattcaactctctatctgccaattaattcacctctccgagctgccattgtt
ggtccaccaatgagttgtgcaagactggctgaaagagttgtagctctcatttgctgtgaa
aaactgcacaaaattggtgaactagatgatcatttgatgccagttggaaaagagactgtt
aaatatgaggaagagcttgatttgcatgatgaagaagaaaccagcgttccaggtcgacca
ggctccacaaaacgaaggcagtgttaccccaaagcaattccagaatgtttgaggaatagt
tatcctaagcctgatcagccctgttacttatatgtaattgggatggtattaactacccct
ttacctgatgagcttaactttaggagaagaaaactctatcctccagaggataccacaaga
tgctttggaatactgacagccaaacctatacctcagattcctcactttcctgtgtataca
cgctctggagaggttactatatctattgagttgaagaagtctggtttcactttgtcatta
caaatgcttgagctgatcacgagacttcatcagtacatattctcacatattcttcggctt
gaaaaacctgcactagaattcaaacccacagaagctgattcagcctactgtgttctacct
cttaatgttgttaatgactccagcactttggacattgactttaagttcatggatgatatt
gaaaaatctgaagctcgtacaggcattcccagtactcagtatacaaaagaaacacctttt
attttcaaactagaagattaccaggatgcagttatcattccaaggtatcggaattttgat
cagcctcatcgattttatgttgctgatgtatatactgatcttacaccactcagtaaattc
ccatcccctgaatatgaaacttttgcagaatattataaaacaaagtacaatcttgatctg
accaatctaaaccagcctttgctggatgtggaccatacatcttcaagacttaatctattg
actcctcgccatttaaatcagaaggggaaagcccttcctctaagtagtgctgaaaaaaga
aaagccaaatgggaaagtctacaaaataaacagatactggttcctgagctctgtgcaatt
catccaattcctgcatcattgtggagaaaagcagtttgtctccctagcatcctttatcgc
ctgcactgccttttgacagcagaggaactaagagcccagacagccattgatgctggcgta
ggggtcaaatcactccctgctgatttcagatatcctaatttggactttggatggaaaaaa
tctattgacagtaaatctttcatctcaattcctaactcctctttagctgaaaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggcactaataga
acctcctctctagaaaatcatgaccagatgtctgtgacctgcagatcattattcagtgag
tcacccaataagatccaaattgaagtttccacagaactcacagcaattaatggtatttca
tacaataaaaatcttgctaatggcagttatgatttggtcaatagagacttttgccaagga
aatcagctaaattactacaggcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaatagtgagaaccagcccaaacccaacaatgaatgtactctgctgagt
aataaataccttgatggaaatgctaacaaatctacctcagatggatgccccacaaaggca
gtgacagtgaccaccaatacttcagaaacttctattacttcaaaagggagaattgattct
gaacaaagcccttccaatgggtattcctcaaaaacccttggcccaaatcctggactcatt
cttcaggctttgacgctttccaatgctagtgatggatttaacttggagcgacttgaaatg
cttggtgactcctttttaaagcatgcaatcaccacgtatctgttttgcacctaccctgat
gctcatgaaggccgcctttcttacatgagaagtaaaaaggtcagcaactgtaatctctat
cgccttggaaagaagaaagggctgcccagtcgcatggtagtgtcaatttttgatccccct
gtaaattggcttcctcctggttatatagtaaatcaagacaaaagtaacacagataaatgg
gagaaagatgaaatgacaaaagacaacatgttggcaaatggtaagctagatgaagattat
gatgaagaggaagatgaagatctgatgtggagggttccaaaggaggaagtggattatgaa
gacgatttcttggagtatgatcaggaacatattaagtttatagataatatgttaatggga
tcaggggcttttgtgaagaaaatatctctttctccattttcaaccaatgactcaaattat
gaatggaaaatgcccaaaaaatcatccctaggtaatataccattttcatctgatattgat
gattttgattatagctcttgggatgcaatgtgctatttggatcctagcaaggctgttgaa
gaagatgattttgtagtagggttctggaatccatcagaagaaaattgtggtattgacaca
ggaaaacagtcaatttcttatgacttgcatacagagcagtgtattgctgataaaagcatt
gcagactgtgtggaagctctactgggctgctatttaaccagctgtggtgagagagctgct
caactttttctctgttctttggggctgaaggtgctcccagtaattaaaaggagtgattgg
gagaacacattataccccagtaaggataatttcaacagtcaacaaaagaatctttcagtg
aactttgcttctatctctgtagccaatttacagtcttctttatataaagacttagaatat
ggctgtttgaagattccgccgaggtgcatgtttgattatccagatgccgaaaaaacactg
aaccaccttatatcaggctttgaaaattttgaaaagaaaattaactacaatttcaagaat
aaagcttaccttcttcaagcatttactcatgcctcctaccactacaataccattactgat
tgttatcagcgtttggaattcctgggagatgcaattttggactacctcataaccaagcac
ctttatgaagacccacggcagcactccccaggagttctaactgacctaagatctgctctt
gtcaataatactatctttgcatcattagctgttaaatatgactaccacaagtacttcaaa
gctgtttctcctgaattattccatgttattgatgattttgtgcagtttcagcttgagaag
aatgaaatgcaaggaatggattctgagcttagacgatctgaggaggatgaagagaaagag
gaagatatagaagtgccgaaggctatgggagatatatttgagtcacttgctggtgccatt
tatatggatagtggaatgtcattggaaatggtttggcaagtctattatccaatgatgcga
ccattaatagaaaaattttctgctaatgtcccccgttctcctgtaagagaattgcttgag
atggaaccagaaactgccaaatttagtcctgcagaaagaacctatgatggaaaggtccga
gttactgtggaagtggttgggaagggaaagtttaaaggtgttggccggagctacaggatt
gccaaatctgcagctgcgaggagagcactacgaagcctcaaagcaaatcagcctcaggtt
cccaacagctga
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