Antechinus flavipes (yellow-footed antechinus): 127550030
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Entry
127550030 CDS
T08818
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127550030
Cell adhesion molecules [BR:
afz04515
]
Cadherins
Protocadherins
127550030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
127550030
NCBI-ProteinID:
XP_051834556
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Position
2:390343351..390348179
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AA seq
794 aa
AA seq
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MEIAPRKARQNRQVVFLIFALFLSVAVSEPQLYSVTEETESGSFVGNVAKTLGLEVEELS
SREARVISENKKQYLQLKRDTGDLLIKEKLDREKLCGPTEPCVLPFQILLENPFQFFRAE
LRVEDINDHSPTFPESEMILKISESTMPGTVFRLKVAQDLDVGINSLQNYTISPNPHFLV
RTRPRSDGRKVPELILDKVLDREELPELTLTLTAVDGGVPPRSGTAQVRVIVMDINDNAP
VFAHARYEVQIPENSPIDSLVVTVSARDLDSGINGDLAYALYQASNEVSQTFGVDPISGE
IRIKKQLDFEAIQKYEMDIEAIDGGGLSGKSIVVVQVMDLNDNSPELTVSSLTNNIPENS
PATVVAVFSIRDRDSGDNGRMICSIPEDLPFSLKPTFKNFYTLVTEGALDREKRIQYNIT
ITITDLGYPRLKTEHNITVFISDVNDNPPVFTQTAYTLYVRENNSPALHIGSVNADDRDE
GANAKLTYSLLPPETEDLPLFSYISVNSDNGHLYSLKSLDYETTKAFQFTVRATDSGSPV
LSSQALVQVVVLDENDNSPFVLYPLQNSTAPCNDLVPRVAEPGYLVTKVVAVDRDSGQNS
WLSYQLLKATDPGLFTVWAHNGEVRTSRPISDRDTIKQRLLVLVKDNGKPALSTAVTLNV
LLVDGFSELHVQLPGTKEQIQNDSLTVYLVISLVSVSFLFLLSIFLFIAVRLWKKRNAAN
GVCLETNDPYSGHLADFNGTGTLSQNYQYEVCLTNGSGNGEFKFLKPIIPNLQAQNSGRD
LEEIPSFRNSCGFS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgccccacggaaagctcggcagaataggcaagtggtatttcttatttttgcc
ttgttcttgtctgtggcggtttcggagccgcagttgtactcagtgacagaggaaactgag
agtggttcctttgtgggtaatgtagctaaaaccctggggctagaggtagaggagttgtca
tcccgagaggcccgggtgatctctgagaataagaagcagtatttgcagcttaaacgtgac
actggggatcttcttataaaagagaagcttgaccgggagaagctgtgtggccctactgag
ccctgtgtgctgcctttccagatcttactggaaaacccttttcagtttttccgggctgag
ctgagggtagaagacataaatgaccattcgcccactttcccggaatctgagatgattctg
aaaatatcagaaagtactatgcctggaactgtgtttcgactaaaggtggcccaggattta
gacgtcggaataaacagtctccagaactataccatcagtcccaatccccatttcctcgtc
cgcactcgcccacgcagcgatggaagaaaggtcccagagctgatattagacaaagtgctg
gatcgggaggaactgcctgagctcaccttaactctcacagcagtagatgggggggttcct
ccaagatccggtacagcccaagtccgggtcatagttatggacatcaatgacaatgcccct
gtcttcgctcacgcccgatatgaggttcaaatcccagagaacagccccattgactctcta
gttgtgactgtctctgctcgagatttagactctggaatcaatggagatttagcctatgcc
ttatatcaagcttctaatgaagtcagtcaaacatttggagtagatcccatttcaggagag
attagaatcaaaaaacaattggatttcgaggcaattcaaaaatatgaaatggatattgaa
gcaattgatggtgggggcctttcggggaaaagcattgttgtggttcaagtaatggatctt
aatgacaattccccagagttgactgtatcgtcacttactaataacattccagaaaattct
ccagcgaccgtggtcgctgttttcagcatccgagatcgtgattccggagacaatggaaga
atgatctgttctatccccgaagatcttcctttttccctgaaaccaactttcaaaaacttt
tatacacttgtcacagaaggagccctggacagagaaaagaggatccaatataacatcact
attaccatcacggatttaggatacccgaggctcaaaaccgagcacaacatcacggtattc
atctccgatgtcaacgacaatccaccagtatttactcagacagcctacacactctacgtc
agagaaaacaatagccccgcccttcatattggcagtgtcaatgcagatgacagggatgaa
ggagccaatgctaaactcacctactccctgctgcctcctgagactgaagatttgcccctc
ttttcctacatctccgtgaattcagacaacggacatctttactctctgaaatccctggat
tatgaaaccactaaagccttccaattcactgtgagagctactgatagcggctctccagtc
ctgagtagtcaagctctggttcaggttgtggtcctggatgagaatgacaactctcccttt
gtgctgtatcctctgcagaatagcacggctccctgcaatgaccttgttccccgggtagca
gagccaggttacctggtgactaaagtggtggcggtagatagagactcaggacaaaattca
tggctttcctatcagctactcaaagccacagacccaggactcttcactgtatgggctcat
aatggagaagtgcgcacatcaagacccatcagcgacagagacaccatcaaacagaggctt
ctagttctggtgaaagataatgggaagccggctttgtccacagcggtcacgctgaatgta
ctcctggtggacggattctctgagctacatgtacaactcccaggcacaaaggaacaaatc
cagaatgactccctcactgtttatttggtcatttctctagtttcagtgtcatttctcttc
ttgctctctatcttcctttttatagcagtgcgtctatggaagaagagaaatgctgcaaat
ggagtttgcttggagaccaatgacccctattcaggccatttagcggatttcaatggcaca
gggactctttcccagaattaccagtatgaggtgtgtctgaccaatggctcagggaatgga
gaattcaagttcctgaagcctattatacccaacctccaagctcagaattctgggagagac
ttagaagaaattccatcctttagaaatagctgtggcttcagttag
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