Antechinus flavipes (yellow-footed antechinus): 127550031
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Entry
127550031 CDS
T08818
Name
(RefSeq) protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127550031
Cell adhesion molecules [BR:
afz04515
]
Cadherins
Protocadherins
127550031
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
127550031
NCBI-ProteinID:
XP_051834557
LinkDB
All DBs
Position
2:390351051..390359884
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AA seq
768 aa
AA seq
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MAPAPREIIRQVLFVCIFIFGRFRVECETIHYSISEEIAIGSCVANFAKDLGLDVKALPS
RQARLVAAGNGEHFLLDLKTGELLTKDRIDREEICAQMDECIIRFELLLQNPLRFFRAEL
AISDINDHSPQFPEDEFILKIPESTTVGTRFPLESAQDLDAGENALQNYTLTPPNEPFVL
HTREQSDGSKYPELLLVKALDREEQPELEFLLTAVDGGIPPTSGTAKVRIIVLDANDNAP
VFSQSLYQATVAENSPTGSVVTIVSAVDSDQGRNGEVTYSFSQNAGKGHRAFQIDSLTGE
IRISKPLDFEVTEKYELSVRATDGGGLSSHCKVLVEVEDVNDNPPEVTVTSLSTLLPEDS
LPGTVVALFSVRDKDSGDHGRASCSIPDDIPFILKPIFNNYYELVTDAALDRERVSNYSI
MITAVDSGSPSLSTRETVTVQILDINDNLPLFNQSSYTMYVTENNSPFLMIGALNATDSD
SGQNAKVTYSIWPENNNSPFSSPFISINSENGQVYILKTLDYEEIKDFKVTAQASDSGAP
SLSTNVTVYIVIVDENDNAPVILYPIQNHSASYSELVPRSAEEDYLVTKVVAVDEDSGQN
SWLSYQLLKATDPGLFIVWSHNGEVRTSRSISDRDAIRQKLIILVRDNGIPVLSTLATLD
LLLVDGFSEAHMHVPDSTEEEAHDDKLTVYLIISLALISFLFLVSISIFIVIKVYKKKQL
KERSHCFGHFDDANNIPRNLLDVTGTGTLFQAYKYDIRLTDGSSNRGI
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcaccgcgggaaataatcaggcaagttctctttgtttgtatttttatcttt
gggaggttccgtgtggagtgtgaaaccattcactattctatatctgaagaaatagccatc
ggctcctgcgtggctaattttgcaaaggacttgggtctggatgtgaaagcgttgccttct
cggcaggctcggctagttgcggctggtaatggggagcatttcctattggacctgaaaaca
ggggaactgctcacaaaggaccgaatagatcgggaagaaatatgtgcccagatggacgaa
tgcatcatccgttttgaattattgctgcaaaatccattgaggttcttccgggcagagtta
gctatttctgatatcaacgatcattcgcctcagttcccagaggatgaattcattttaaag
atccccgaatccactaccgttggcacgcgcttccccctggagagtgcgcaggatttagat
gcaggggaaaatgcccttcagaactacacgctcactccaccaaatgagcccttcgttttg
cacactagggagcagagcgatggcagcaagtacccggagctgctcctggtaaaggccctg
gaccgcgaggagcaaccagaactcgagttcctactcaccgctgtggatggtggaatcccg
cccacctcggggaccgccaaggtccgtatcattgtcttggatgcaaatgacaatgcccca
gtgttctctcagtctctgtaccaagctactgtggcagaaaacagtccaacgggctcagta
gtgactattgtatctgcagttgattcagaccaaggtcgcaatggagaagtgacttactca
ttcagtcaaaatgccggtaaaggtcatcgtgctttccagatagattctctgacgggggaa
attcgaatctctaaacctctagactttgaagtgactgaaaaatatgaactaagtgttagg
gccaccgatggaggaggattatcctcgcattgtaaagtccttgtggaggtggaggatgtg
aatgacaacccccctgaagtgacagtgacatctctttccactctactccctgaagactct
ttacctggaacagtggtggccctttttagcgtccgtgacaaggactctggggaccatggg
agagcctcttgttccattccagatgacatccctttcatcctgaagccgattttcaacaat
tactatgaattagtgacagatgcagccttggatcgggaaagggtttccaattacagcata
atgatcactgccgtagactcgggatctcctagtctctcaactagggaaactgtcacagtg
caaatattagacatcaatgataatctccctctttttaatcaatcgtcctataccatgtat
gtgactgagaataacagtcctttcctgatgattggagcgctaaatgctactgattcagac
tcggggcagaatgctaaagtgacatattctatctggcctgagaacaataattctcccttt
tcctccccattcatttctatcaattcagaaaatggacaagtctacattctgaagactctt
gattatgaagaaatcaaagacttcaaagtgactgcgcaagcatcggattcaggggcccct
tccttgagcactaatgttacggtatatatagtcatcgtggatgaaaatgacaatgcccca
gttattttataccctattcagaaccactctgcttcttatagtgaactggtccctaggtcg
gctgaagaagattacttggttactaaagtggtggctgtggatgaggactcaggtcagaac
tcctggctttcctaccagttacttaaggcaaccgatcctgggttgttcattgtatggtct
cataatggagaagttcgaacttcgagatccatcagcgacagagatgctatcaggcagaaa
ctcattattcttgtaagagacaatggcatcccagtactctctactcttgcaacactagac
cttcttcttgtagatggcttttcagaagctcatatgcacgtcccagattctactgaagag
gaggcgcatgatgacaaattaactgtgtatttgattatttcattggctttaatttccttt
ctctttctagtttctatttcaatctttatagttatcaaagtgtataaaaagaaacagttg
aaggagcgatcccattgttttggccatttcgatgatgccaataatatcccaagaaattta
ttggatgttactggcacagggactctctttcaggcatacaaatatgacatacgtttaaca
gatggctctagtaatagaggaatttaa
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