Antechinus flavipes (yellow-footed antechinus): 127550079
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Entry
127550079 CDS
T08818
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04140
Autophagy - animal
afz04148
Efferocytosis
afz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127550079
04148 Efferocytosis
127550079
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127550079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127550079
Membrane trafficking [BR:
afz04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
127550079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
ANAPC4_WD40
Vps39_1
WD40_Prp19
Beta-prop_HPS5
zf_RING_Vps8_fungal
Beta-prop_EML_2
TPR_PEP5_VPS11
WD40_WDHD1_1st
zf-RING_5
Frtz
RIG-I_C
Beta-prop_RIG_2nd
zf_RING_Vps8
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
127550079
NCBI-ProteinID:
XP_051834655
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All DBs
Position
1:8450663..8600382
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AA seq
853 aa
AA seq
DB search
MAEAEEKEVSVEESTDESEEEESEEEPKLRYERLSNGVTEILQKDAASCLTVHEKFLALG
THYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHE
TFDCPIKIVAVHPQFLRSHNKQFVTGGKKLVLFERSWMSRWKSSVLHEGEGNIRNVKWRG
NLIAWANNMGVKILDVISKQRITNVPRDDISLRPDMYPCSLCWKDDVTLIIGWGSSIKVC
SVKERHASEIRDLPNRYVEIVSQFDMEFYISGLAPLCDQLVVLSYVKETSDKMEREYCAR
PRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERD
QDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYISHLVEKGEHDMAARKCQKV
LGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPILKPLIYEMILHEFLESDYEGFATLIR
EWPGDLYNNSVIVQAVRDHLKKEPQNRTLLQTLAELYTYDKSYSQALQIYLTLRHKDVFQ
LIHKHDLFSSIQDKIVLLMDFDAEKAVDMLLDNEDKISIKKVVEELENRPELQHVYLHKL
FKRDHHKGQRFHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLS
RMGNSRSALKMIMEELHDVDKAIDFAKEHDDAELWEDLILYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRSQMK
GILVDEENICESCLSPVLPADAAKPFSAVIFHCRHMFHKECLPVPSMNSAGQFCNICSAK
NRGPGSTILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgaggagaaggaagtatctgtggaagaatctacagatgagtctgaggag
gaagaaagcgaagaggagcccaagctcaggtatgagcgactctccaatggggtgacggag
attctgcagaaggacgccgccagctgcctgacagtacacgagaagtttttggcactgggc
acacactatggcaaggtttatttgctcgacgtccaaggaaatatcactcaaaagtttgac
attagtcctgtgaagataaatcagattagtctggatgaaagtggagaacacatgggcgtg
tgctcggaggatggcaaggtgcaagtgttcggactgtattccggggaagaatttcacgag
acttttgactgtcctattaaaattgttgccgttcacccccagtttctgaggtcccataac
aagcagtttgtgaccggagggaagaagctggtgttgtttgagcgatcctggatgagcaga
tggaagtcttcggttttgcacgaaggagaaggaaacataagaaacgtgaaatggcgggga
aatctgatcgcttgggccaataacatgggtgtgaagatcctggacgtgatttcgaagcag
agaatcaccaacgtgccccgagacgacatcagccttcgccccgacatgtacccttgcagc
ctctgctggaaggacgatgtcacgctcatcatcggctggggctcctccatcaaggtctgt
tcggtgaaggaacggcacgccagtgaaatacgcgacttacccaaccgttatgtggaaata
gtgtctcagtttgacatggagttctacatcagcgggcttgctcctctctgtgaccagctt
gtggtgctttcgtatgtcaaggagacctcagacaaaatggagagggagtactgtgcccgg
ccaagactggacattatccagccacttccggagacctgcgaagagatctcctctgatgcc
ctcacagtgagaggctttcaggagaatgaatgcagagactaccacctggagtactccgaa
ggtgaatcgctcttctatattgtcagtcccagagatgttgtcgtggctaaggagcgggac
caagacgatcacatcgactggctccttgaaaagaaaaaatatgaagaagctttgatggct
gctgaaattagccaaaggaatattaaaaggcacaagattctggatatcggtctggcctac
ataagtcacctggtggagaagggagagcacgacatggcagcccgcaaatgtcagaaagtt
cttgggaaaaacgcagctctctgggaatatgaagtttacaaatttaaagaaatcggacag
cttaaggcaatcagcccgtatttgccaagaggggatcccattctgaagcctctcatctat
gaaatgatcctgcatgagtttttggagagtgattatgagggctttgccacgctgatccga
gagtggcccggggacctctacaacaactcggtcatcgtgcaggctgttcgggaccacctc
aagaaggagcctcagaaccggaccctgctgcagacactggctgaactgtacacgtacgac
aagagctacagccaggccctgcagatctacctgacgctccgccacaaggacgtcttccag
ctgatccacaagcacgacctcttcagctccatccaggacaagattgtgctgctcatggac
ttcgacgccgagaaagccgtggacatgcttctggacaacgaagacaagatttcgataaaa
aaggttgtggaggagctggaaaacaggccagagctgcagcacgtgtatctgcacaagctt
tttaagagggaccatcacaagggccagcgcttccacgagaagcagatcagcctttatgcc
gaatacgatcgccccaacctgctgccctttctgcgagacagcacccactgccccctggaa
aaggctcttgagatctgccagcagagaaactttgtggaagagaccgtctatctgctgagc
cgcatgggcaacagtcgcagcgccctgaagatgatcatggaggagctgcacgacgtggac
aaggccatcgactttgccaaggagcacgacgacgccgagctgtgggaggacctgatcctg
tactccatcgacaagccgcccttcatcaccggcctgttaaacaacatcggcacccatgtt
gacccgattctcctcattcaccgaattaaggaagggatggagattcccaacctgagagac
tcgctggtgaaaatcctgcaggactacaatctccagattctccttcgtgaaggctgcaag
aagatcctggtggcagactctttgtccctcctaaagaaaatgcaccgctcccagatgaaa
ggcatcctggttgatgaagaaaacatctgcgagtcgtgtctctcccctgtgcttcctgca
gatgcagcaaagcccttcagtgctgtcatcttccactgtcggcacatgttccacaaagag
tgtctgcccgtccccagcatgaattctgctggacaattctgcaacatctgcagcgctaag
aaccggggcccaggaagcacaatcttggagatgaaaaagtag
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