Antechinus flavipes (yellow-footed antechinus): 127550430
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Entry
127550430 CDS
T08818
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04145
Phagosome
afz04814
Motor proteins
afz04962
Vasopressin-regulated water reabsorption
afz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127550430
09142 Cell motility
04814 Motor proteins
127550430
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
127550430
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127550430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127550430
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afz04812
]
127550430
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127550430
Cytoskeleton proteins [BR:
afz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127550430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Dynein_IC2
Beta-prop_EML
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
Rrn6_K-rich
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
127550430
NCBI-ProteinID:
XP_051835327
LinkDB
All DBs
Position
2:450224661..450226675
Genome browser
AA seq
610 aa
AA seq
DB search
MSDKSELKAELEXKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEETDLEKKRREA
EALLQSMGLTPESPLVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
DFPPREIVTYTKETQTPVMAQPKEDDEDDDDVVTPKPPIEPEEEKTLKKDDEEEVPPHEL
TEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLN
RQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYM
FHCQSAVMLATFAKFHPNLVVGGTYSGQIVLWDNRSNKKTPGQRTPLSAAAHTHPVYCVN
VVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMVLVHKQSKAVAVTFMSFPVGDVNNFV
VGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTVKL
WTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVE
GNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADA
EEEAATRIPA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgaattgaaagctgaattggagtgaaagaagcagcggttggctcaa
atcagagaggagaagaaaagaaaagaagaagaaagaaagaaaaaggaaactgatcagaag
aaagaagcagttgctccagttcaggaagaaactgaccttgaaaaaaagaggagagaagca
gaagcattattgcagagcatggggctgacaccagaatctcctctggtccctcctcctatg
tctccatcctccaaatctgtgagtactccaagtgaggctggaagccaagactctggagat
ggcgccgtgggatctagacgaggacctattaaacttggaatggctaaaattacacaagtt
gactttcctccccgagaaattgtcacatacacaaaggagactcagacaccagttatggca
caaccaaaagaagatgatgaagatgatgatgatgttgtaacccccaaaccacctattgag
cctgaagaagagaaaactttaaagaaagatgatgaagaagaagtcccccctcatgagctc
actgaagaggaaaaacaacagatcctgcactctgaagagtttctgagtttctttgatcat
tccacgagaattgtagaaagagctctttctgagcagattaacatcttctttgactacagt
gggagagatttggaagataaagaaggagaaattcaagcaggtgctaaactgtccttaaat
aggcagttttttgatgaacgttggtcaaagcatcgtgttgttagttgcctggattggtca
tctcagtacccagaattgctcgtggcctcctataacaacaatgaagatgctcctcatgag
cccgatggggtggctcttgtgtggaatatgaaatacaaaaaaactaccccagagtacatg
tttcactgccagtcagctgtaatgttggctacgtttgcaaaatttcatccaaatctagtt
gttggtggtacatattcaggtcaaattgtattgtgggataatcgaagtaataagaaaacc
ccgggccagagaactccactttcagctgctgcacatacgcaccctgtatattgtgtgaat
gtagttggaactcaaaatgctcacaatttgattagcatctctactgatggaaaaatttgc
tcatggagtttggacatgctttcccatccacaggatagcatggtgttggttcataagcag
tccaaagctgtagctgtcacttttatgtccttccctgttggagatgtcaacaactttgtt
gttggaagtgaagaaggctctgtatacacagcttgtcgccatggcagcaaggctggaatc
agtgagatgtttgaaggacatcaaggaccaataactggtattcattgccatgcagctgtt
ggagctgtggatttctcacatctttttgtaacttcctcatttgactggacagtgaaactt
tggacaaccaagaataacaaacctttatactcatttgaagacaattcagattatgtttat
gatgtgatgtggtcacccacccaccctgccctgtttgcttgtgtggatggcatggggaga
ctggatctatggaatctcaacaatgacacagaggtgccaactgcaagcatttctgtggag
ggtaatcctgctcttaatcgtgtgagatggacacattctgggagagagattgctgtaggc
gattctgaaggacagatagttatatatgacgtgggagagcaaatcgctgttcctcgcaat
gatgaatgggctcgttttggccgaacactagcagaaattaatgcaaaccgagctgatgca
gaggaggaagctgccacccgcatacctgcttaa
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