KEGG   Antechinus flavipes (yellow-footed antechinus): 127550551
Entry
127550551         CDS       T08818                                 
Name
(RefSeq) roquin-2 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:afz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afz03000]
    127550551
   04121 Ubiquitin system [BR:afz04121]
    127550551
Transcription factors [BR:afz03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    127550551
Ubiquitin system [BR:afz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127550551
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 zf-C3HC4 Prok-RING_4 zf_CCCH_4 zf-CCCH_UNK zf-C3HC4_4 zf-C3HC4_2 Xin
Other DBs
NCBI-GeneID: 127550551
NCBI-ProteinID: XP_051835544
LinkDB
Position
2:complement(465010031..465066183)
AA seq 1211 aa
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKDIIFPLRTALAAPPKFWYRLRNKKITATVRTFPLLNKV
GVNNTVTTTAGNVISVIGSTETTGKLVPSTNGISSTENSVSQLIPRGADTTLRALENVKK
VGKVGSSGQNISGASAESVTENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFV
TRVPVYPQPSESIQYFPDPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVP
ESSLPPASVPYADHYSTFPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRP
PMYQRDDIIRSNSLPPMDVMHSSVYQTSLRERYSNSLDGYYPMACQPPSEPRTSVPLPRE
PCGHLKTSYEDQLRRKPEQWAQYHTQKAPLVSSTLPMATQSPTPPSPLFSVDFRTEFSEN
VSDVRGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVH
LFETQRRVKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSD
YVPYVNAVDSRWSSYGSDSTTSAHYIERDRFIVTDLSSHRKHSSTGDLLSIELQQAKSNS
LLLQREANALAMQQKWNSLDEASHLTLNLLSKEMELRNGESDYTEDTADTKPDRDIELEL
SALDTDEPDGQSEQIEEILDIQLGITSQNDQLLNGTTIENGHPLKQHPKEPVEPKRQSLG
EDHVILEEQKAVLPVTSCFSQPIPASISNASCLPVTTSVSVSNLILKTAHIMSEDKNDFL
KPVANGKMVNS
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgcctgtgcaagctgctcagtggacagaattcctgtcctgtccaatctgttataatgaa
tttgatgagaatgtgcacaagcccatcagtttaggttgttcacacaccgtttgcaagacc
tgtttaaataaacttcaccgaaaagcatgcccttttgaccagactgccatcaacacagat
attgatgtgcttcctgtaaactttgcacttctccagttagttggagcccaggtaccagat
catcaaacagtaaaattaagtaatctaggagagaataagcactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggagggaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgactcttgtaaattgt
cagcttgtggaagaagaaggtcgtgtaagagctatgcgagcagctcgatcacttggggaa
agaactgtaactgaattgattttacaacaccagaaccctcaacaattatctgccaatcta
tgggctgccgtcagggctcggggatgccagttcttaggaccagctatgcaagaagaggcc
ttaaagttggtattactggccctggaagatggttctgctctttcaaggaaagttttggta
ctttttgttgtccaaagactggaaccaagatttcctcaggcatcaaaaacaagtattggc
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcaccaaaagggatgaagat
tcttctctgatgcagctaaaggaagaatttagaagttatgaggctttgaggagggagcat
gatgcccagatagttcatattgctatggaagcagggcttcgtatatcaccagaacagtgg
tcttcacttctctatggtgatttggcacataaatcacatatgcagtccatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcagcgt
acaggtgatccagcaaacctaaatcgattgagacctcatttggaacttcttgcaaacata
gatcctaatccagatgctgtctcaccaacttgggagcaattagaaaatgcaatggttgct
gtaaagactgtggtgcatggacttgtggactttattcagaactatagtcgtaaaggccat
gaaacaccacagccgcagccaaatagcaaatataaaactagtatgtgccgagatctacga
cagcagggggggtgtccacgaggaacaaattgtacatttgctcattctcaggaagagctt
gaaaaagatataatttttcctctgaggactgctttagctgcaccccccaaattttggtat
cgtttaaggaacaaaaagatcacagcaactgtacgaacatttcctctcctaaataaagtt
ggcgtaaacaacactgtcacaactacagctggaaatgtcatttctgtcataggaagtact
gaaacaactgggaaacttgttccaagtactaatgggatttcaagtacagaaaatagtgtt
tcccagttaatcccccgtggtgctgacaccacattacgagctttggagaatgtgaagaaa
gtagggaaggttggctccagtggtcagaatatttctggggcttctgcagaatctgtaact
gaaaataaaattggctctccacccaagactcctgtaagtaacgtagcagctacctcagct
gggccccctactgttggaacagagctgaattcagtgcctccgaaatccagctcatttgta
actagagtacctgtatatcctcagccttctgaaagcatacagtattttccagatccaagg
acccagatatcctttgaagttccacagtacccacagacaggatactacccaccacctcca
acggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaataatgttcca
gaatcttccctcccacctgcttctgtgccatatgctgatcattacagtacatttccccct
cgagatcgagtgaattcctctccttaccagcctcctcctccgcagccgtatggaccagtt
cccccagtaccttccggaatgtatgctcctgtatatgacagtcggcgcatctggcgtcca
ccaatgtaccaacgagatgacattattaggagcaattctttacctccaatggatgtgatg
cattcatctgtctatcaaacatctttgcgagaaagatatagtaattctttagatggatat
tatccaatggcatgtcagccacctagtgaaccaagaacaagtgtacctttaccgagggaa
ccttgtggtcatttgaagactagttatgaggatcagttaagacgaaaaccagaacagtgg
gcgcagtatcatacccagaaagcaccccttgtttcttcaactcttcctatggcaacacag
tcaccgacaccaccttctcctctgttcagtgtagactttcgtactgagttctccgagaac
gtaagtgatgtacgtggtacaaaatttgaggaagatcatctttcccattattcaccttgg
tcctgtggcaccataggctcttgtataaatgccattgattcagagcccaaagatgtaatt
gctaattcaaatgctgtattaatggatttggacagtggagatgttaaaagaagagtacat
ttatttgaaactcaaagaagggttaaagaagaagatcctataattccttttagtgatgga
cccattatctcaaaatggggtgcaatttccagatcttcccgaacaggttatcataccaca
gatcctatacaggctactgcttcccaaggaagtgctactaaacctatcagtgtatcagat
tatgtcccttatgtcaatgctgttgattcaaggtggagttcatatggctctgattctact
acttcagcacactatatagaacgggatagatttattgttactgatttatccagtcataga
aagcattccagtactggagatcttctaagcattgaacttcagcaggcaaagagcaactca
ttgttgcttcagagggaggccaatgcattagccatgcaacagaaatggaattccttagat
gaagccagtcaccttaccttaaatctcctaagcaaggaaatggaattgagaaatggagag
agtgattatactgaagatacagcagatactaagcctgatagagatattgaattagaactt
tcagcacttgacactgatgaacctgatggacaaagtgaacaaatagaagaaattctggac
atacaacttggtatcacttctcaaaatgatcagctgctgaatggaactacaatagaaaat
ggccacccactaaaacaacacccaaaggaacctgtggagcccaagaggcaaagtttaggt
gaagaccatgtgattctggaggaacaaaaagcagtcctgccggtaacttcttgcttcagc
cagccaatcccagcatctattagcaatgcaagttgcctgcccgtcactacatctgtcagt
gtcagcaatctcatcttgaaaacggctcatattatgtctgaagataaaaatgacttttta
aagcctgttgcaaatgggaagatggttaacagctga

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