Antechinus flavipes (yellow-footed antechinus): 127550670
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Entry
127550670 CDS
T08818
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127550670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127550670
Membrane trafficking [BR:
afz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
127550670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
127550670
NCBI-ProteinID:
XP_051835743
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All DBs
Position
2:complement(481724472..481760320)
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AA seq
807 aa
AA seq
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MSTESPPPHRKSPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNM
LGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLY
LLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTD
EETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQ
LEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAEL
HQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVS
LQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTY
NNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQ
DQPDQPVEDPDPEDFADEQSLVGRFIHLLRSDDPDQQFLILNTARKHFGAGGNQRIRFTL
PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGAL
AAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPL
RTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQ
CMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKH
FHNTLEHLRLRRESPESEGPIYEGLVL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgagagcccaccccctcatcgaaaatcgcctacaacacaacagtcaccgcag
gatgagcaggaaaagctcctagatgaagctattcaggcagtgaaggttcaatcattccag
atgaaacgatgcctggacaaaaacaaacttatggatgctctgaaacatgcctctaacatg
cttggtgaacttcgaacttctatgttatcaccaaagagctactatgaactttatatggct
atttctgatgagctgcactatttggaggtctacttgacagatgaatttgccaaaggaagg
aaagtagcagatctttatgaacttgtacagtacgctggaaatattatcccaagactctac
ctacttattacagtgggagttgtttatgtcaagtcatttcctcagtccagaaaagatatt
ttaaaagatttggtagaaatgtgccgtggtgtacagcatcccttaagaggtctgtttctt
cgaaattaccttcttcagtgtaccagaaacattttgccagatgaaggagagccaacagat
gaagaaacaactggagacatcagtgattctatggattttgtactactaaactttgcagaa
atgaacaagctctgggtgcgaatgcaacatcaaggacatagccgggatagagagaaacga
gaacgggaaagacaggaacttagaattctagtgggaacaaatttggtccgcctcagtcag
ttggaaggtgtaaacgtggagcgatacaaacagattgttttgactggtattttggaacaa
gttgtgaattgtagggatgccttggctcaagagtatctcatggagtgtatcattcaggtc
ttccctgatgaatttcacctacagactttgaacccttttcttcgagcctgtgctgagtta
caccaaaatgtaaatgtgaaaaacataatcattgctttaattgatagattagctttattt
gctcaccgtgaagatggacctggaatcccagcagatattaaactttttgacatattttca
caacaagtggctactgtaatacagtccagacaagacatgccttcagaagatgtggtgtct
ttacaagtatctctcattaaccttgccatgaagtgctatccagatcgtgtggattatgtt
gataaagtgttagaaacaacggtggaaatatttaataagctaaatctagaacatattgct
accagcagtgcagtttcaaaggagcttacaaggctgttgaagatacctgttgacacctat
aacaacattttaacagttttgaagttaaaacattttcatcccctctttgagtattttgac
tacgagtccagaaagagtatgagttgttatgtgcttagtaatgtcctggattataacacc
gaaattgtttcacaagaccaggtggatgcaatcatgaatctagtatcaacattgattcaa
gaccaaccagatcaacctgtagaagacccagaccctgaagactttgctgatgagcagagc
cttgtggggaggttcattcatcttctgcgatcagatgatcctgatcagcaattcttgatt
ttaaatacagcacggaaacattttggagctggtgggaaccagcgcattcgttttaccctg
cctcccttagtatttgcagcatatcaactggcttttcgctataaagaaaattccaaagtg
gatgataagtgggaaaagaaatgccagaagatcttttcatttgcacatcagactatcagt
gctttaatcaaagcagaattggcagagctgcctctacgacttttccttcaaggagctcta
gctgctggggaaattggttttgaaaaccatgagacagtggcatatgaattcatgtctcag
gcattttctctgtatgaagatgaaatcagtgattctaaagcccagctggctgccatcacc
ttgatcattggaacatttgagaggatgaagtgcttcagtgaagagaaccatgagccttta
aggactcagtgcgccttggcagcttccaaattgctcaagaagccagaccagggccgggct
gtgagtacatgtgcccatctcttctggtccggcagaaacacagacaagaatggagaagag
cttcatggaggcaagagagtaatggaatgcctaaagaaagctttgaagatagcaaatcag
tgcatggatccctcgctacaagttcagctttttatagaaattctgaacagatatatctat
ttttatgaaaaggaaaatgatgcggtgacaattcaggttttaaatcaacttatccagaag
atacgagaagaccttccaaatcttgagtccagtgaagaaacagaacagattaacaaacat
tttcataataccttggagcatttgcgcttgaggagggaatcaccagagtctgaggggcca
atttatgaaggtcttgtcctttaa
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