Antechinus flavipes (yellow-footed antechinus): 127550707
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Entry
127550707 CDS
T08818
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127550707
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127550707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
127550707
NCBI-ProteinID:
XP_051835792
LinkDB
All DBs
Position
2:489350610..489602184
Genome browser
AA seq
2920 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TSQKMTDFEHLNQFESLKLHQVNQSFSSPVENVLSPHSQFNCSPVHPPNQSNGLFPDVAD
GSPMWGHQTGVSNQNGSPFHQQGHSHSMQQTKSFVAHPDFALFQVTEQQQQCTSLQSQQN
RNNNNNPGQETLSQSKTFMEVNISGPHRVHVTHQSQITSASTSQQPLSMQQFSPTSNASM
HFCGNHQDGNFDGQSPNMTPCSVNNSQQFSSHYSFSSNHISPSSLLQSSTALASSHSTHT
LSDFTGSNAFMSQTGTKQDSTQHILNSNSSLNSNNFEMLHSAHPQGNFSSSKLSPVHMNF
PDPVNSASHMGHFNDHVETNGFSSLEDNLLHQVGSQTETFTGLDPEDLLQEGLLPQFDDS
AFGQDNSSHVLEHDLDQQLTPQLLTQPSDIARTHSQSQVHSWHLSVSNHQHLHDREHSSL
QRQPPSSKKTEGSGTYAKLQNTQVRAISEKKQKRKVESESKQEKANRIISEAIAKAKERG
ERNIPRVMSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLII
TLGKKQKRKNVSSDELSDAEQIPQRPFKDADSQLLIQWRVVAQGSWAAARVEKRRSNRQV
KRKKYAEDTEGKQSEEEAKVSVKIRKSSASLPAEQPLQLFVENPSEEDAAIVDKILSSRI
VKKEISSGIMIDAEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFF
ADMEEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAK
IEEFEQLQASRPDSRHLDRPPPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRN
CILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG
SLVSRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAH
RLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGD
LKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAF
LSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPDFHLQAMIQS
AGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAA
IDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKA
VKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGA
YGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDP
NFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKL
RRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCL
VHYRGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSTFDIHKAE
WLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDV
WVPEPDHSEVPAEWWDLDADKSLLIGVFKHGYEKYNTIRADPALCFLDRVGKPDEKAVAA
EQRANDYMDGDVEDPEYKPAPALFKDDLEDDISSPGDLVIADGDGQMMEGDKIYWPTQSA
LTTRLRRLITAYQRTSKNRQAQQIQPAFSVQANVMQPPYEETALNPKIAAKIERQQRWTR
REEADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRL
PSKEELVDPSIFIQPITEERASRTLYRIELLRKVREQALRHPQLFDRLKLCQPNPDLPVW
WECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRSYSQNKGTHSRTSAPLIQQYQ
MALSTSPLASQPRLLDTKGNALEDTKVKNESLKEEPQSSEEESVSSDEIRTGIKSEPLSP
KNGVLPQTTGDQKPTGKVETDRRMVAARTEPLTPNPASKKQRMPKRGSESSSDSDSDSDR
SSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSATSSSSSSSSSSSSSSSSSEESDSE
EETQKRAEGPTHMKSYDEESVASLSTIQDETQDSFQMNNGTSNSAYILQGGYMLAASYWP
KDRVMINRLDSICQTVLKGKWPSVRRGYEGSAVASFYTTKLLDSPGAAADAGEPRVPTPP
SVGAREEHDQSTQMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEDGSLGQ
QQYLARLRELQNASETSLVNFPKSMPVSDTSSQPAIGANGVILDNQPIVKKRRGRRKNVE
DVDILLLNRNKPPNHVTVGITTSQITPGINPALSYTQSQGLLDIENPVPVINLKDGTRLA
GDDAPKRKDLEKWLTEHPGYVEDLGAFIPRMQLHEGGRPKQKRHRCRNPNKLDINSLTGE
ERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMHDRIL
TGPVVREEVSRRGRRPKSEIAKATAAAAAATAANVSGNPLLANGLLPGVDLTTLQALQQN
LQNLQSLQVTAGLMGMPASLSGGEVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPTESV
AEEKKGNDSKEPDGRKERTESQNSDNVGENSVSSSPSTSSSAALNTAAATNPLALNPLLL
SNILYPGMLLTPGLNLHIPALSQSNIFDVQNNKNNDLDSTKPVEEKEEDSRVRDQEEKGE
TEPSSLNENSTDEGSEKADASSGSESTSSSSEESDSSNED
NT seq
8763 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggacttttttgacgatgccaatctttttggtgagaccttagag
gatttgtcagatgatgcctttgtacaaccaggacctgtttcacttgttgatgaattgaat
ttgggtgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcaa
acatcacagaagatgactgattttgaacatttaaatcagtttgagtcactgaaacttcac
caagttaatcaatcatttagtagcccagttgaaaatgtgttatcaccacattctcaattt
aattgttccccggtccatcccccaaatcagtctaatggtttgtttccagatgtagctgat
ggtagtccaatgtggggccatcagactggtgtttcaaatcaaaatgggtctccttttcac
caacaaggacattcacattctatgcagcaaactaaaagctttgtagcacaccctgacttt
gccttatttcaggtcactgagcaacagcaacaatgcacatcactacagtcacagcaaaac
agaaacaataataataacccagggcaggaaactttaagccaatctaaaacctttatggaa
gttaatatttctggtccacatagagttcatgttactcaccaatctcaaataaccagtgca
tcaacttcacaacaacctctctccatgcaacagttttctccaacatcaaatgcttcaatg
cacttctgtggcaatcaccaagatgggaattttgatggacagtctccaaatatgactcct
tgctctgtcaataactcacaacagttttcttcacattattccttctccagtaatcacata
tctccaagcagtcttcttcagtcctctacagctcttgcatctagtcattcaactcatact
ttatctgattttactggaagcaatgcctttatgtctcagacggggaccaaacaggattct
acccaacatatcctaaattcaaattcatctttgaattcaaataattttgaaatgttgcat
tcagcacatcctcagggtaacttcagcagctcaaaattgtctcctgtgcacatgaatttc
ccagatcctgtaaattctgcttctcacatgggacattttaacgatcatgtagaaacaaat
ggtttttcatctctagaagataatttgcttcatcaagtggggtctcaaactgagacattc
acaggacttgatccagaagatcttcttcaggagggtctccttcctcaatttgatgactca
gcatttggccaagataattcaagtcatgtcttagaacatgatcttgatcaacaacttact
ccgcagcttttaacacagccttcagatatagctcgaactcattctcaaagtcaagttcat
tcatggcatttgtcagtttctaatcatcagcacttacatgatagagaacattcatcctta
caacgtcagcctccttcctctaagaaaactgaaggttctgggacatatgctaagttacag
aatacccaggtgagagccatttctgaaaagaagcagaaaagaaaagtggaatcagaaagc
aagcaagaaaaggctaatcgtattatatcggaagcaatagcgaaagcaaaggaacgagga
gaacgaaacattcctcgagtaatgagccctgaaaactttcccagtgtttcagctgaagga
aaggaggaaaaaaaaggtagaaggatgaaatctaagccaaaagataaagaaagcaagaaa
acaaaaacttgttcttcaaccaagttaaaggagaagacaaaaattgggaagctcattatt
acattgggtaagaagcaaaaaagaaagaatgtgtcttcagatgaattgtctgatgctgag
cagattccacagcgtccattcaaagatgcagattctcaacttcttatccaatggagagta
gtggctcaaggctcctgggctgctgcaagagttgagaagagaagatcgaatcgtcaagtt
aaaaggaaaaagtatgctgaagatacagaaggaaaacagtcagaagaagaagcaaaagtt
tctgtgaaaatcagaaaaagttcagcctctttacccgctgaacaacctttgcagttattt
gtggagaatccaagcgaagaagatgctgcaattgtggacaaaatactgtcttctagaata
gtaaagaaagaaatatcatctggaataatgattgatgcagaagaattttttgtaaaatac
aagaattactcctatcttcactgtgaatgggccacagaacaacaacttttaaaagataaa
agaatacagcagaaaatcaaaagattcaaattgagacaagcacaacgagcccattttttt
gcagatatggaagaagaaccttttaatcctgactatgttgaagttgatagagtattagaa
gtttctttttgtgaagataaggacactggtgagcctgtaatttactatttggtaaaatgg
tgctcattgccatatgaagatagtacatgggaactaaaggaggatgtagatcaagcaaaa
atagaagaatttgaacaattgcaagcctcaaggcctgactctaggcatttggaccgccct
cctcctaatacatggaaaaagatagaacagtccagagaatacaaaaatggcaaccagctc
agggaatatcaactagaaggactcaactggctcttgtttaattggtacaatagacgaaac
tgcattttagctgatgaaatgggtcttggcaaaacaattcaatcaattacattcctctac
gaaatacttctgactggtatacgggggccttttctgatcattgcaccgctttcgacaatt
acaaactgggagagagaatttcgcacatggactgatcttaatgttgtggtatatcatggg
agcctggttagcaggcagatgatacagcagtatgagatgtacttcagggactcacagggg
cgtattattagaggagcatacaggttccaggccataatcaccacttttgaaatgattctg
ggaggctgtggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcgcat
aggttaaagaataaaaattgcaagcttctagaaggtctaaaactcatgaatctggaacac
aaggtgcttttgactggtacaccacttcagaatacagttgaagaactattcagtcttctt
catttccttgaacccttacgatttccctctgaaactacttttatgcaagaatttggggat
cttaaaacagaagaacaggtgcaaaagcttcaagccattttaaaaccaatgatgttgaga
agattaaaagaagatgtagaaaagaagttggccccaaaagaggaaaccataattgaagta
gaacttactaatattcagaagaaatattaccgggctattttagaaaaaaattttgcattt
ttatccaaaggagctggacaagctaatgtacctaatttagttaacactatgatggaactc
agaaaatgttgtaatcatccctatcttatcaaaggtgctgaggaaaaaatacttggagaa
tttaaagaaacacataacccagctgctcctgactttcatcttcaagcaatgatccaatct
gctggcaaattggtcctcattgataagcttcttccaaaaatgaaagcaggtgggcataaa
gtgctcatcttctctcagatggtgcgctgcctagacattttggaggactatcttatacat
aagaggtatttatatgagcgaattgatggaagagtccgaggaaatcttcgacaggctgcc
atagaccgatttagtaaacctgattcagacagatttgtatttcttttgtgcactcgagct
ggtgggctgggcattaatttaactgcagctgatacatgcatcatttttgattctgactgg
aatcctcaaaatgacctccaggctcaagctcgctgtcacaggattggtcaaaacaaagca
gtcaaagtctacagattaataactcgtaactcatatgagagagagatgttcgaccgagca
agtctaaaattgggtctagataaggctgtgttacagagcatgagtggaagagaaaatagt
gttggcggtattcagcaactgtccaaaaaggaaatagaagatctacttcgaaggggtgca
tatggtgccattatggatgaagaagatgagggttctaaattctgtgaagaggatattgat
cagattttacagcgtcgcacaaaaacaatcacaattgagtcagaaggaagaggttcaaca
tttgctaaggcgagttttgtagcttctggaaaccggactgatatttctttagatgatccc
aacttctggcagaaatgggcaaagaaagcagaaattgatatagatgccatcagtggcaga
aacagcttagttattgatactccaaggattagaaaacaaacaagaccctttagtgccacg
aaagatgaattggctgaattgtctgaagttgaaagtgagggagatgataagcccaaactc
cggagaccatgtgaccgttccaatggctatggaaggacagaatgctttcgagtggagaaa
aatctactagtttatgggtggggtcgatggagagagattctagctcatggtcggtttaaa
agacaactaaatgaacaagatgtggagatcatttgccgagcccttttagcatattgcctt
gttcactacagaggagatgagaagattaagggtttcatatgggatctcattacccctacg
gaggatgggcaaacaagagaattgcaaaatcatctgggtctgtcagctcctgtccccagg
ggcagaaaagggaagaaagtgaaaactcaaacaagtacatttgatatccataaagcagaa
tggcttcgaaagtataatcctgagcatctgctacaagatgaaggctataaaaaacacata
aaacatcattgtaataaagttttgcttcgagtgaggatgctgtattatttgaaacaagaa
gtcattggtaatgaattccagaaagtttttgatggagttgaagcaagtgacattgatgtt
tgggtccctgaaccagaccattctgaagtccctgctgagtggtgggatcttgatgcagat
aaatctctccttattggagtttttaaacatggttatgaaaagtacaacacaatcagagca
gacccagcattgtgttttttggatcgagtaggaaaacctgatgagaaagcagttgctgct
gaacaaagagcaaatgattacatggatggggatgtggaagacccagaatataaaccagct
ccagctttattcaaagatgacttggaggatgatatttcatcaccaggagaccttgtaata
gcagatggagatggccaaatgatggaaggagacaagatttattggcctactcagtctgct
ttaaccacacgcttgcgccgcctcataactgcatatcaacggactagtaaaaatagacaa
gcccaacaaatccagccagcattctcagtacaggccaatgtgatgcagcctccttatgaa
gaaactgctcttaaccctaaaatagcagccaaaattgaaagacagcagagatggacaaga
agagaggaagctgacttttatagagttgtatctacttttggagtggtatttgatcctgac
agaggacaatttgactggacaaaatttagagccatggctaggctgcacaagaaaactgat
gatagtttggaaaagtacttatatgcttttatgtccatgtgcaggagagtttgccgcctt
ccttccaaagaagaattggtggacccaagtatttttatccaacccatcacagaggaacgt
gcttctaggactttgtatcgaattgagcttttgaggaaagtacgagaacaggctcttcga
catccacaattatttgatcgtttaaaactttgccagccaaatccagatttgccagtctgg
tgggagtgtggcactcatgacagagatttgcttattggagctgctaagcatggggttagc
aggacagactatcacattcttcgggatcctgaactttcatttatggcagctcagagaagc
tatagtcaaaataaagggactcattcaaggacttctgccccacttatacaacaatatcaa
atggcattgtctacttcccctctggcttctcaaccaagattactggatactaaagggaat
gctcttgaagatacaaaagttaaaaatgaaagccttaaagaggagcctcagtcttctgaa
gaggaatctgtatcttctgacgaaatcagaacaggaataaaatctgaacctttaagtcca
aagaatggtgttttgccgcagacaactggagatcagaagcctactgggaaggttgaaaca
gataggcgcatggttgcagccaggacagagcccctaaccccaaatccagcttccaagaaa
cagcgaatgcccaaaaggggatctgagtccagctctgattcagattctgattctgataga
tcatcttgttcttctagatcatcatcttcatcctcctcctcttcttcgtcttgttcccac
tctcgatcaggatctagttcttcatcgtcttcatcttgttcttcagcaacttcttcatcc
tcttcttcgtcttcctcttcctcctcttcttcatcctcatcagaagaaagtgatagtgaa
gaagaaacacaaaagcgagcagaaggccccactcacatgaaatcatatgatgaggaaagt
gttgcatcactaagcactatacaagatgagacccaggatagttttcagatgaacaatgga
acatcaaattctgcttacatcttacaaggtggatacatgctcgctgcttcttattggcca
aaggatcgggtaatgatcaatcggttagacagcatttgtcaaacggtcctgaaaggaaaa
tggccatcagtccggagaggttacgagggcagtgcagtggcatctttctacacgaccaag
cttctggatagccccggtgctgctgcagatgctggcgagccccgtgtgccgactccccca
agcgtaggggcgagagaagagcatgaccagtccacacagatgtcaaaggtgaagaagcat
gtacgagaaaaggagtttacagtgaaaatcaatgacgaaggaggtttgaagttgactttt
caaaagcaaggactttctcagaaaaggccatttgaaagtgaagatggttcacttggacag
caacagtacctggcacggcttcgggaacttcagaatgcttcagagaccagcctagtcaat
tttccaaagtccatgccagtatcagatacttctagtcagccagcaattggtgccaatgga
gtcatattagataaccagcctatagtcaaaaaaagaagaggaagaaggaagaatgtagaa
gatgttgacattctcctattaaatagaaataaacctcctaatcatgttacagtaggcatt
accacctcacaaattactccagggataaatccagcactgtcttatactcaatctcaagga
ttacttgatatagaaaatccagttccagttattaatctgaaagatggaacaagacttgca
ggtgatgatgcaccaaaacgaaaggatttagaaaaatggcttacagagcacccaggttat
gtggaagatttaggagcctttattcctagaatgcagcttcatgaaggggggagacctaag
caaaaaagacatcgttgcagaaaccccaacaaactagatattaatagtctcactggagaa
gaacgtgttcagttgatcaacagaagaaatgccagaaaggtaggaggagcatttgctcct
cctttgaaagatttatgtagattcttgaaagaaaattctgaatatggagtcgctcctgaa
tggggagatgttgttaaacagtctggatttcttcctgaaagcatgcatgaccgtattctt
actgggcctgttgtaagagaagaagtaagcaggcgtggaagacgacctaaaagtgagatt
gccaaggcaacggcagcggcagctgctgcaacagcagcaaatgtgtctggcaatcctttg
ctagccaatggattgctcccaggtgtggatctgacaactcttcaggccttacaacaaaac
ctgcaaaaccttcagtctctacaagtaactgcaggattgatggggatgcctgccagccta
tctggtggagaagtgaataaaaacatggctgctatgttcccaatgcttttgtcagggatg
acaggattaccaaatttactaggcatgggaggactcctaacaaaacctacagaatctgtg
gcagaagagaaaaaaggcaatgactccaaggagccagatggaagaaaagaaaggacagaa
agccaaaactctgacaatgtgggggagaactctgtttcgagttctccttcaacatcctct
tctgctgcgttaaatactgctgcagctaccaaccccttagctcttaacccattactattg
tccaatatattatatccagggatgcttctcactccaggccttaatcttcatatcccagct
ttgtcccagtccaatatttttgatgtacagaacaacaaaaacaatgacctagactcaacc
aagcctgtagaggaaaaggaggaagattccagggttagagatcaggaagaaaaaggggaa
actgaaccaagttctctcaatgaaaacagcacagatgagggttcagaaaaagcagatgct
tcatctggatctgagagtacatcatcatcatctgaggagtcagattctagtaatgaagac
tga
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integrated database retrieval system
