Antechinus flavipes (yellow-footed antechinus): 127550805
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Entry
127550805 CDS
T08818
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127550805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127550805
Spliceosome [BR:
afz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127550805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
127550805
NCBI-ProteinID:
XP_051835963
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Position
2:complement(498042866..498071308)
Genome browser
AA seq
523 aa
AA seq
DB search
MASSRASATATKTPSRTPEDTASPVVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAG
IEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPI
TLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGSNNLKTARL
WIANYSLPRAMKRLEEARLHKEIPETSRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHF
SPNSKLLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDKKDVNLASC
AADGSVKLWSLESDEPVADIEGHSVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL
HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH
PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcgagcttcggccacggcaaccaaaacccctagcaggactcctgaagac
actgcctctcctgtggtgaagaagcctcatatctactatggcagtttggaagagaaagag
aaggagcgtcttgccagaggggaatcagggatgttggggaaagaaggaattaaagctgga
attgaggctggaaatattaacataacatctggggaggtttttgaaattgaagaacatatc
agtgaaaggcaagcagaagtgttggctgagtttgagcgacggaagcgagccaggcaaatc
aatgtttccacggatgactcggaagttaaggcttgccttcgagctttgggtgaaccaatc
acactctttggtgaaggccctgctgaaaggagagagagattgagaaatattctctctgtg
gttggcacagatgccttaaaaaagaccaaaaaggatgatgaaaaatccaaaaagtccaaa
gaggagtatcaacaaacttggtaccatgaaggatccaacaacctaaagactgctaggctg
tggattgctaattattcactacccagagcaatgaagcgcttggaagaagcccgtctccat
aaagagattccagagacatctaggacatcccagaaacaggaattacataaatctcttcgt
tctttgaataacttctgcagccagattggagatgatcgtcccatctcctattgtcatttt
agtcccaattccaaactcctggccacagcatgttggagcgggctgtgcaaactctggtct
gtccctgattgcagcctcctgcataccctaagaggccacaacactaatgttggagcaatt
gtttttcaccccaaatccactgtttccctggataagaaagatgtcaacctggcctcttgt
gctgctgatggctctgtgaaactctggagtctggagagtgatgagcctgtggcagatatt
gaaggccattcggttcgtgtagcaagagtgatgtggcatccttcaggacgttttctgggc
accacctgctacgaccgttcatggcgcctatgggacttggaggcccaggaagagattcta
caccaggagggccacagcatgggtgtatatgacattgccttccatcaggatggttctttg
gctggcactgggggattagatgcatttggtcgtgtatgggacctgcgtacaggtcgatgc
atcatgttcctagagggccacctgaaggagatttatgggatcaacttttctccaaatggc
taccacattgcaactggcagtggcgacaacacatgcaaagtgtgggacctgaggcagcga
cgttgtgtctataccatccctgctcaccagaacttggtgactggagtcaagtttgagcct
atccatgggaacttcttgcttactggtgcctatgacaacacagccaagatctggacacac
cctggctggtctccactgaagaccctggctggccatgaggggaaagtaatgggcctggac
atttcttcggatggtcagctcatagccacctgttcctatgataggaccttcaaactttgg
atggctgaatag
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