Antechinus flavipes (yellow-footed antechinus): 127550906
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Entry
127550906 CDS
T08818
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127550906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127550906
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127550906
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127550906
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
127550906
NCBI-ProteinID:
XP_051836162
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Position
2:502083423..502098049
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AA seq
293 aa
AA seq
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MAMEIRLPVARQRLPESLDRDTQKHLVVPGDTITTDTGFMRGHGTYMGDEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRDFLREGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEQREEEVGGFIANLEPVPLSDREVISRLRNC
IVALVAQKMMLFDTSLLYCYEASLSHQIKDILKPEIMEEIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagattcggcttcctgtggcccgccagcggctacctgagagcttggacagg
gacacgcaaaagcacttggtggttcccggggacacgattaccacagataccggcttcatg
cggggccatggtacctatatgggagatgagaagcttatagcatctgtggcaggctctgtg
gagagagtaaacaagctgatttgtgtgaaagctttgaaaacaaggtataatggtgaagtg
ggagacattgtggtggggagaatcacagaggttcagcagaagcggtggaaggtagagacc
aattctaggctggattcagtcttgcttctctcatccatgaatcttcctggaggagagctg
agaagaagatctgcagaagatgaacttgcaatgagggacttcttacgggaaggggacctt
atcagtgctgaagtccaggctgtattttctgatggtgctgtgtctctacatacccggagt
ctaaagtatggaaaacttgggcagggagttcttgtccaggtttccccttctctggtgaaa
cgacagaagacccatttccatgacttgccttgtggtgcctctgtgattttgggcaataat
ggcttcatctggatctacccaactcctgagcagagagaagaagaagtagggggttttatt
gccaatctagagccagtaccactctctgatcgggaggtgatttctcgactccgaaattgt
attgttgccctggtggctcagaagatgatgttatttgacactagccttttgtactgctat
gaagcatctctttcccatcagatcaaggacattttaaaaccagagataatggaagaaatt
gtaatggaaactcgacagagacttttggaacaggagggataa
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