Antechinus flavipes (yellow-footed antechinus): 127551153
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Entry
127551153 CDS
T08818
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127551153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127551153
Membrane trafficking [BR:
afz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127551153
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
127551153
RAVE complex
127551153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_HPS5
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127551153
NCBI-ProteinID:
XP_051836616
LinkDB
All DBs
Position
2:complement(523389465..523544281)
Genome browser
AA seq
3044 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV
SCVECSNQHGRIAASYGNAVCIFEPLGINSHKRNCQIKCQWLKTGQFFLSSVTYNLAWDP
QGNRLLTATDLVQLWAPPESDILEEEEEIDQVKDNKIPPVLNDWKCIWQCKTSVSVHLME
WSPDGEYFATAGKDDCLLKVWYPMTGWKSIIPQEHQELKKKQIFTNFSFVYLAHPRAVTG
FSWRNTSKFMPRGSVCNVLLTSCQDGICRLWAETLLPEDCLLGEQICETSTSSIASSLSH
SGRQKDRIQHALETIHHLKNLRKGQRRSSVLVTHTELMPDQMGTHEVQRHISHHANALCH
FHIAASINPITDIPSVLAGTAFNFDEGNGGFVVHWLNNKEFHFTSSTEIFMQQLRRLSDL
QVEHENDYGDRDEEELQEERERGLHMKLDHELSLDRESETGTGSSEHEDGEREGSPRSHT
RATMPMPLPTVLLDRKIEMLLTEWNRNPDMLFTIHPIDGTFLVWHVKYLDEYNPGIFRQV
QVSFSSRIPVAFPSGDASSLSKNIMMYAAKDVTNILWHQEKSTDDVLESQPSSRHESMNV
NIAVPVVMMVSKHVDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHSVLP
LLLTSSHHNAVLTPESDCLWESDTKLSRVMDSVKHIKGSSKEPLRNAATRTFHDPNAIYS
ELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFV
ASDGKKLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITNQC
GSNTQLLHVFQEDFIIGYKPLKMETEQKETEIFFQPSQGYRPPPFSEKFFLVVIEKDSNN
YSILHMWHLHLKSVQACLAKTEISSSENLLTVPGQRNIDSSPETPPSISSMPHSSSIANL
QTASKLILSSSLVYSQPLDLPDGVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDNRV
RFWKCHVEGEQNGRTNGKETYHWRKWPLMNDEGEDSSSTVSIVGRPVAVSCSYTGRLAVA
YKQPIQHNGFVSKEFSMHVCIFECESTGGSEWVLEQTVHLDDLIKVGSVLDSRVSVDSNL
FVYSKSEAVLSKDRYLMPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGIVTEQT
NSKDGVAVITLPLGGSIKQGIKSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGILVVGMD
CEMHVYAQWKHAVKFGDNETGTPAAEESTGDPPVSYKSSMVSRKSIIEGTAITDDVFATP
AVVQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAIVRDA
ETGEGAKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLYALLAADQDTTYRI
SEESTKISQDYENSTKSAQEDQYSDLFQIQAITTDDFLDLELEKRESKSKVINLSQYGPA
YFGQEHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDEHRDKSHSGRDTLDE
CGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQRGD
PQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLAMKKKAVVWGLFR
SQHDEKMTAFFSHNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEK
MEDIQLAMIIARLYESEFETSSTYISILYEKILGCQKDSSGFNCSRLHPDPFLRSLAYWV
MKDYTRALDTLLEQTPKEEDENQVIIKSCNPAVFSFYNYLRTHPLLLRRNFGSPEGTLAT
LGFKSEKSFVGKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSSFSVNKDHL
GALESKAWGESSESVPLTSANVQSSQFDWSQTTLELVEEPLKLDWGEDQESASEEENDAG
LVMKNSDLEKRNGKQDQKVSDANMLLSPQEEESQEGDPEVDVIAEQLKFRACLKILMTEL
RTLATGYEVDGGKLRFQLYNWLEKEIAAMHEICNHESSGKEYSSKTYSKIDGEILDFEEM
IDKPEVGSYERHQLERRRLQAKREHAERRKLWLQKNQDLLRVFLSYCSLHGAQGGGLASV
RMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILY
TIVQMKVPPHPNIEDVKVHTLHSLAASLSASIYQALCDSHSYSSQTESNQFTGMAYQGLL
LSDRRRLRTESIDEHATPNSSPAQWPGVSSLINLLSSARDEDQPKLNILLCEAVVAVYLS
LLIHALATNSFNELFRLAAHPLNSRMWAAVFGGGVKLVVKPRRQSENISAPPVPSEEIDK
HRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPLSDSGLI
YDSDESIHSEEEDDDAFFSDTQIQEHRDPNSYSWALIHLAMVKLALHNVRNFFPVAGLEF
SDLPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYINTCPSDTSVGAGPATLRNKAM
LDPENTPFKSRDSSAFPAKRLWHFLVKQEILQETFIRYIFTKKRKQSESVEDLEEQVKQN
FVVEDCLNKVEADLGYPGGKAKIIHKESDMIMAFAVNKANNNEIVLASTHDVQELDVTSL
LACQSYIWIGEEYDRESKSSDDVDYRGSTTTLSQAPTTSFTVSQVHPSSSLPWLGSGQTS
TGAGVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWSRPQQLVCFRQAGNARVTRM
YFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYLSWQCHGKTTSDFAFITSSSLVATSGQ
SNDGRNVCLWDTLISPANSLIHGFTCHEHGATVLQYAPKQQLLISGGRKGWVCIFDIRQR
QIIHTFQAHDSAIKAMALDPCEEYFTTGSAEGNIKVWRLTGHGLIHSFKNEHAKQSIFRN
IGAGVMKIEIVPGNRLFSCGADGTLKMRVLPSAFNIPNSIFDIL
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtcctcaccggggctgtcaatcctggggacaactgctattccgtg
ggcagcgttggggatgtccctttcacggcatatggatcaggctgtgatattgttattttg
gccaatgactttgaatgtgtgcagatcatccctggtgctaaacatggaaacatccaagtc
agctgtgtggagtgctctaatcagcatggaagaattgcagcttcatatggaaatgctgtt
tgcatttttgaacccttgggtatcaattctcacaagagaaattgtcaaatcaagtgtcaa
tggcttaaaactggacaattttttctgagttctgtgacttacaacttagcatgggatccc
caaggtaacaggttgttaacagcaactgatttggtacagttatgggctcctccagagagt
gacattttagaagaagaagaagaaattgatcaggttaaagataataaaattcctcctgtt
ttaaatgattggaagtgcatctggcaatgcaaaacttcagtttctgttcatttgatggaa
tggtcccctgatggtgaatattttgctacagctggaaaggatgattgtcttttaaaagtg
tggtatcctatgactggttggaagtctattatacctcaagagcatcaagaattgaaaaaa
aagcagatatttaccaacttttcatttgtttatttggcacatcctcgagctgtaacaggt
ttttcatggcgtaacactagcaagttcatgcccaggggttctgtttgtaatgtgctatta
acctcatgccaggatggcatctgccgtctgtgggcagaaaccttattaccagaagactgt
cttctgggggaacagatttgtgagacgagcacttccagcattgccagcagtctttctcat
tctggaagacagaaagacagaatacaacatgctctcgagaccattcatcatttgaaaaat
ttaaggaaaggtcagagaagatcttctgttcttgtgactcacactgaattaatgcctgac
cagatgggaacccatgaagttcaaagacatatttcccatcatgctaatgcactgtgtcac
tttcatattgcagcaagtatcaaccctatcacagatattccatcagttctagctggaact
gcatttaactttgatgaaggaaatgggggatttgtggttcattggctaaacaacaaagag
ttccattttacatcctctactgaaatatttatgcagcagttaagaaggctttctgatttg
caagtagaacatgaaaatgattatggagatagagatgaggaggaactgcaagaagagaga
gagaggggcttacatatgaagctagatcatgaattatccttggatagagaatctgaaaca
ggaacaggatcatcagaacatgaagatggagaacgagagggaagtcctagaagtcacacc
cgagccactatgccaatgccacttccaacagtcttattagatcggaaaattgaaatgctg
cttactgaatggaacaggaatccagatatgctttttacaatccaccccattgatggtact
tttttggtgtggcatgtaaaatatttggatgaatacaacccaggaatatttagacaagtt
caggtttcattttcttctcggatccctgttgcatttccctctggggatgccagttctctc
agcaaaaatattatgatgtatgctgctaaagatgtgactaatatcctgtggcatcaggag
aagagtactgatgatgttcttgaatcccaaccaagctccagacatgagagcatgaatgta
aacatcgcagttcctgtagtaatgatggtctccaaacatgttgatggatctttaaatcaa
tgggcagttacttttgctgataaatctgcctttactactgtgctaactgtatctcacaag
ttcagatactgtggtcaccgttttcacctcaatgatctggcttgtcattcagttttgcca
ttattattaacatcatctcatcataatgctgtactgactcctgaatcagattgtctttgg
gaatcagatacaaaactaagtagagtcatggattctgtaaagcatattaaaggttcatct
aaagaaccccttagaaatgcagctactcgtacatttcatgacccaaatgcgatctacagt
gagctaattttgtggcgggtggacccaataggacctttgtcatatacagggggagtctct
gaattggcacgaatcaactctctccacacttctgccttttccaatgtagcttggcttcca
actcttattcccagctactgtctaggtacatactgcaattctgctagtgcttgctttgtt
gcttctgatggcaaaaaattgagattatatcaagctgttgtagatgccagaaagttgctt
gatgaactttcagatccagaatcctcaaaacttattggagaagtgtttaacattgtgagc
cagcagtctactgctcgacctggatgcattattgagcttgatgcaataactaaccaatgt
ggctcaaatacacagttacttcatgtttttcaagaagatttcattataggatataaacca
cttaagatggaaacagagcagaaggaaacagagatatttttccaaccatctcaaggatat
cgtccaccacctttttcggaaaagttctttcttgtagtaattgaaaaagacagtaataat
tattctattcttcacatgtggcatcttcatcttaaatctgtacaagcttgtttagctaaa
actgaaatttcttcatcagagaatctacttacagtgcctgggcaaaggaacatagattct
tctccagaaactcctcctagtataagttctatgccacattcttcatctattgctaatctc
cagactgctagtaaactcattctgagttctagtcttgtctacagtcaaccgcttgacctt
ccagatggagtggaagtaattagagcaacaccttcagcaggtcatctgagttcctcttca
atttatcctgtctgccttgcaccttacttggtggttacaacttgttctgataaccgagta
cggttttggaaatgtcatgtagaaggagaacaaaatggtagaactaatgggaaagaaacc
tatcattggagaaaatggcctttgatgaatgatgaaggagaagatagtagcagcacagtg
agcatcgtaggaagaccagtcgctgttagttgttcctatacaggccggcttgcagtggcc
tacaagcagcctatccagcacaatggctttgtttctaaagaattctccatgcatgtgtgt
atattcgagtgtgaatccactgggggatcagaatgggttttagaacaaacagttcatctt
gatgatttaattaaggttggtagtgtccttgattcaagggttagtgttgatagtaatctc
tttgtctatagtaaatcagaagccgttttgagtaaagaccgatatctaatgcctaacatc
aagcatttagttcatttggactgggtttccaaagaggatggctctcacatactcactgtg
ggagttggtgctaacatctttatgtatgggcggctttctgggattgtgacagagcagaca
aacagcaaagatggcgtagccgttatcactttgccattaggtgggagtatcaagcaaggg
ataaagtcaagatgggttcttctaagatcaatagacttggtatcttctgttgatggcaca
ccttcattgccagtttctctttcttgggtaagagatggtatactggtagtgggaatggac
tgtgaaatgcatgtttatgctcagtggaaacatgctgtcaagtttggagacaatgaaact
ggtactcctgctgctgaggaatcaacaggggaccctcctgtgtcttataaatctagcatg
gtctcgaggaaaagtataatcgaagggacagctatcacagatgatgtgtttgctacacca
gctgttgttcaagatggcggcttatttgaagctgcccatgtactttctccaactcttcca
cagtatcacccaacccagttattggaattgatggatttagggaaagttcgcagggctaaa
gccatcctttctcatttagttaaatgtattgcaggggaagttgcaatagttagggatgct
gagactggagaaggagctaagcggcatctttctcgaaccatcagtgtaagtggcagtacc
gcaaaggatacagtcacaataggcaaagatggtactcgggattatactgagattgattct
attcctccactcccattgtatgcactgcttgccgcggatcaagatacaacttatagaatt
tctgaagaaagtactaaaatatcacaggactatgaaaattctactaagagcgcacaagaa
gaccagtattcagatctgttccagattcaggccataacaacagatgattttcttgactta
gagctagaaaagagagaaagcaaatccaaagtaattaatctttctcagtatggcccagct
tactttggtcaagaacatgccagtgtactttcaagccatcttatgcattcaagtcttcca
ggccttacccgtttggagcagatgttccttgtagctttggctgatactgtggctaccact
agcactgaacttgatgaacatagagacaagagtcactcaggaagagatacattagatgaa
tgtgggttgagatatttattggctatgaggttacacacatgccttttaacatcattacct
cctttatatcgagtacaacttcttcatcaaggtgtgtctacatgtcactttgcctgggct
tttcattctgaggctgaggaagaactaattaatatgattcctgctattcaacgaggagat
cctcagtggtctgaattaagagccatggggataggttggtgggtcaggaatattaacaca
cttcgaaggtgcattgaaaaggttgctaaagcatcatttcagagaaacaatgatgctttg
gatgctgcattattctaccttgctatgaagaagaaagcagtggtgtggggtctgtttagg
tcacaacatgatgaaaagatgactgcgtttttcagtcataattttagtgaagatagatgg
cgtaaggctgctttgaaaaatgccttttccttattaggaaaacaacgttttgaacagtca
gcagccttttttctgttagctggttctttgaaagatgccattgaggtttgtctggaaaaa
atggaagacattcagctagccatgattattgctcgtttgtatgaatctgaatttgagacg
tcatccacgtacatatccattctatatgaaaagattttgggttgtcagaaagatagctca
ggattcaattgtagtagattacatcctgatcccttcctgcgtagtcttgcttattgggta
atgaaagactacacaagggctttagatacactcttggaacaaacaccaaaggaagaagat
gaaaatcaagtcattattaaatcttgcaatcctgcggtatttagcttttacaactacctc
cggacccacccattgcttctacgaagaaactttggctcacctgaagggactttagcaact
ttaggtttcaaaagtgagaaaagttttgttggtaaaattaaccttatcgagagaaaatta
ttctttaccactgcaaatgctcactttaaagttggatgtcctgtgctagctcttgaggta
ctttccaaaattccaaaagtaactaagaagtcaagcttttctgtaaacaaagatcacctt
ggagctttggaatccaaagcatggggtgaaagtagtgaaagtgttcccttaacctcagcc
aatgtacaatcctctcagttcgactggagtcaaacaacattagaacttgttgaggagcca
ctcaagcttgattggggtgaagatcaagaaagtgcttcagaagaggaaaatgatgctggt
ttggtaatgaaaaattcagatttggaaaaaagaaatggaaaacaagatcagaaagtttca
gatgccaatatgttactaagcccccaggaagaagaatctcaggaaggtgaccctgaagtt
gatgtaattgctgaacaactaaaattcagagcatgtttaaagatcctcatgactgaactt
aggacattggctacaggctatgaagtagatggaggaaaactcagatttcaactctacaac
tggttagaaaaagaaattgctgccatgcatgaaatatgtaaccatgaatcaagtggtaaa
gaatactctagcaaaacatattccaaaatagatggtgaaatccttgattttgaagaaatg
atagacaaaccagaagttggctcatatgaacgccaccagttagaaagacgaagattacaa
gccaaacgagaacatgctgaaaggaggaaattgtggttacagaaaaaccaagatcttttg
agagtatttcttagttactgtagtctgcacggagcacaaggtggtggcctagcctcagta
agaatggaactcaaatttttgcttcaagaatcacaacaggaaactacagtgaaacaactc
cagtctccgctaccattacctacaacactacctctactttcagcaagtattgcttcaaca
aaaacagtcatcgctaatcctgtattatatctaaataatcacatccatgatatcctttat
accattgttcagatgaaagtgccaccacatcccaatattgaagatgtgaaggtgcacaca
cttcattcattagcagcttcactttctgcatctatttaccaagcattatgtgacagtcat
agctatagtagccagactgagtcgaatcagtttacaggaatggcttaccaagggcttctt
ttaagtgatcgccgaagactaagaacagaaagcattgatgaacatgcaacaccaaattca
tctcctgctcagtggccaggtgtgagctcccttatcaacttactaagctctgctcgagat
gaggaccaaccaaaattgaacatcttgttgtgtgaagctgttgttgctgtctacttaagt
ttattgatacatgcccttgccacaaattccttcaatgaattatttagactagcagctcat
ccattaaacagtcggatgtgggctgctgtgtttggaggtggagtgaaacttgtagtaaag
cctcgaagacaatcggaaaatatttcagcacctcctgttccttctgaggaaatagataaa
catcgaagacgttttaacatgagaatgttagtgcctggaaggcctgtaaaagatgcaaca
cccccaccagtacctgcagaaagaccatcttataaagaaaaattcatccctccagaactt
agtatgtgggattattttgtcgcaaagccatttctacctttatctgatagtggccttata
tatgattcagatgaaagcattcatagtgaagaagaagatgatgatgcttttttttctgac
acacaaatccaggagcatagagatccaaactcctacagctgggcccttatacatttggca
atggttaaactcgcacttcataatgtccgaaatttctttcctgttgctggtctggaattc
tcagatcttcctgtaacttccccattgggcattgctgtgataaaaaatttagaaaattgg
gaacaaatcctacaggagaaaatggaccagtttgaagggccgcctccaaactacatcaat
acatgtcctagtgatacctcagtaggagcaggaccagctaccctgcgcaacaaagcaatg
ttagaccctgaaaatactccattcaaatccagagattcctctgcatttccagctaaacga
ctctggcatttccttgttaaacaagaaatccttcaagagacatttattagatatatattt
actaagaaaagaaaacagagtgagtctgtagaagatcttgaagaacaggtcaaacaaaac
ttcgtagtggaagattgcctaaacaaggttgaagctgatcttggttatccagggggaaaa
gcaaaaatcatccacaaagaatctgacatgattatggcatttgcagttaataaggcaaac
aataatgaaatagtcttggcttcaactcatgatgtacaagaacttgatgttacttctttg
ttggcctgtcagtcatatatatggattggagaagagtatgacagagaatcaaaaagttct
gatgacgttgattatcgtggttctactacaactctttctcaggccccaacgacatccttt
acagtgagtcaggtgcatccatcttcttctttgccatggttaggcagtggacaaacaagc
actggagctggtgtgcttatgaaaagaaatcttcataatgttaagagaatgacttcacat
cctgttcatcagtactatctgacaggagctcaggatggcagcgtacgaatgtttgaatgg
tctcgtccacagcagctggtgtgcttccgtcaagcaggcaatgcaagagttaccaggatg
tatttcaattcacaagggaacaagtgtggtgttgcagatggagaaggttttctaagcatt
tggcaagtaaatcaaactgcatccaatcccaaaccttatctgagttggcagtgccatggc
aaaaccacaagtgactttgcatttattacctcttcaagtctagttgccacatctggacag
tccaatgatggcagaaatgtatgtctttgggataccctgatatcacctgcaaacagtctc
attcatggtttcacctgccatgagcatggtgccacagtacttcagtatgcacctaagcag
caacttttaatctctggaggcaggaaaggatgggtctgtatatttgatattcgacagaga
caaataattcatacgttccaggcccatgactcggctattaaggccatggctctggaccct
tgtgaggaatattttactacaggatcagcagaggggaacatcaaggtgtggagattgaca
ggccatggcttaattcattcatttaaaaatgagcatgccaaacaatccatattcagaaat
attggggctggagtcatgaagattgaaatagttccaggcaatcgacttttctcctgtgga
gcagatggcacactgaagatgagagttttacccagtgcttttaacatccccaatagcatt
tttgacattctgtaa
DBGET
integrated database retrieval system
