Antechinus flavipes (yellow-footed antechinus): 127551243
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Entry
127551243 CDS
T08818
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127551243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127551243
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127551243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_S1
Rrp44_CSD1
CSD2
IQCJ-SCHIP1
OB_HELZ2
DUF7043
Motif
Other DBs
NCBI-GeneID:
127551243
NCBI-ProteinID:
XP_051836773
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All DBs
Position
2:complement(540127854..540168475)
Genome browser
AA seq
1055 aa
AA seq
DB search
MLQKREKVLHLRTFQGRTVRIVREHYLRPSVPCNSPLCPQPARCRNDGKLLSSDVTHYVI
PDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANE
FQQYSYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGV
FVISFKNYLDNFWPDLKAAHELCDSILQARRERELESQENNGKEYPEHLPLEVLEAGIKS
GRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLISDILVHGMKARNRSIHGDVVVVELLP
KNEWKGRTAALCENENDDKTPGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGK
NAQKILVTPWDYRIPKIRISTQQAEALQDFRVVVRIDSWESTSVYPNGHFVRVLGRIRDL
EGEISTILVENSISVAPFSEAQMCEMPVNTPENPWKVNPEEEKERIDLRKTHLVFSIDPK
GCEDVDDALSVRTLSNGNLELGVHIADVTHFVMTNSYTDIEARTRATTYYLADRRYDMLP
SILSADLCSLLGGVDRYAVSVLWELDKKSFEIKKVWYGRTIIQSAYKLYYEAAQDLLDGN
FSVIGDIPEFKEMDEKSRQAKQDELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQL
DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWENFPHQALLRQHPPPHQEFFSEL
RECAKAKGFSMDTRSNKTLADSLDRANDPRDPLVNRILRSMATQAMSNALYFSTGSCAED
EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDNKTEIKENLFSSKDLEELCRHI
NNRNRAAQHAQKQSTELFQCMYFKDKDPETEDRCIADGVIYSIRTNGVLVFIPRFGIKGA
AYLKNKDGLVISCYQDGCSEWKPGSLQRFQNKITSTTAGGESITFSLFDHVTVRISVQAS
RCHADTIRLEIISNKPYKISETELSQQNSLLMKNELVKEVTRSVEEAQLAQEEAKVKIIQ
EEYQEYCQTKGTSLYTLLEEIRDLALLDVSSDYGM
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaagcgggagaaggtgctgcacctgaggacgttccaaggccgcactgtgcgc
attgtcagggagcactacctgcggcccagcgtgccctgcaacagcccgctgtgcccacag
cccgcccgctgccgtaacgatgggaaacttttgtccagtgatgtgactcattatgttatc
cctgactggaaagttgttcaagattaccttgaaattcttgagtttcctgagctgaaaggt
attattttcatgcaaacagcctgtcaagctgtacagcatcaaagaggacgaagacagtat
aacaaacttagaaatctcctaaaggatgctcgccatgattgtattctctttgctaacgag
ttccagcagtactcctatcttccaagagaaagaggagagtctatggaaaaatggcagacg
aggagcatttacaatgcagctgtctggtactatcaccactgtcaagatagaatgcccatt
gttatggtgacagaagatgaagaggccattcagcagtatggaagtgaaactgaaggtgta
tttgtgatttcattcaagaattatctggacaacttttggccggatttaaaggctgcccat
gagctgtgtgattcaatacttcaggcccgtcgtgagagggaactcgaaagccaggagaac
aatgggaaagaatacccagagcatcttcctctggaagtattagaggctggaattaagtct
gggagatacatccagggaattctcaatgtcaataaacacagagcacaaatagaagctttt
gtccgactccagggagccagcagtaaagactcagatttaattagtgacatccttgtccat
ggtatgaaagctcgcaaccgctcaattcatggtgatgtagtagtggtggaactactcccc
aaaaatgaatggaaaggaaggactgctgctttatgtgagaatgaaaatgatgacaaaaca
cctggggaatctcccagtgaacctatgcccacaggcagagtggtaggaatccttcagaag
aactggcgggattatgtggtgacttttccatctaaagaagaggttcagtcccagggcaaa
aatgcccagaaaatcttagttacaccttgggattacagaattcccaaaatcagaatcagt
actcaacaagcagaagcactacaggacttcagggtggttgtgcgtattgattcttgggag
tcgacatctgtttatccaaatggacattttgtacgagttttaggaagaataagagatctt
gaaggggaaatttcaacaatcctggtggaaaacagtatttctgttgcccctttctcagaa
gcccagatgtgtgaaatgccagtcaacaccccagagaatccctggaaagtaaatcctgag
gaggaaaaagaacgcattgatttgaggaaaactcatcttgtgtttagcattgaccctaaa
ggctgtgaagatgtggatgatgctctatcagttagaaccttaagtaatggcaacttggaa
cttggggttcatattgcagatgtcactcattttgtgatgacaaattcttatactgatatt
gaagctagaacaagggcaaccacttactacttagcagatcgtcggtatgatatgctaccc
tccattctgagtgctgatttgtgttccctacttggaggagttgatcggtatgctgtaagt
gtcttgtgggaattagacaaaaagtcctttgaaataaaaaaagtatggtatggtagaacc
atcattcagtcagcatataagctgtattatgaggctgcacaagacctgttagatggaaac
tttagtgttataggtgatattccagaattcaaagaaatggacgagaaaagccgacaagcc
aaacaggatgaattggtatgggcaattggaaagttgactgatatagcaagacatgtgcgg
gccaaacgggacagttgtggtgccctagaactagaaggagtagaagtccgagtacagctg
gatgataaaaagaacattcacgatctcatccctaagcagcccctagaagttcacgaaaca
gttgctgaatgtatgatcctggccaatcactgggtagccaagaagatatgggagaacttc
ccgcatcaagctttgttacgacaacatccacctccacatcaggagtttttttcagagctc
cgggaatgtgctaaagctaaaggcttttctatggatacacggtctaataaaactctagcc
gattcccttgatcgtgccaatgacccaagagatcccttggtgaacagaatactacgttcc
atggctacccaggccatgtccaatgcgttgtacttctcaactggctcttgtgcagaagac
gagtttcaccattatggacttgcattagataaatatacccatttcacttctccaattaga
agatattcagatattgttgtgcaccgattgttaatggcagcaatttcaaaagataataaa
acagagattaaggaaaatttgttcagcagcaaagacctagaggaattatgccgacatatc
aacaacagaaacagagcagcccagcatgcccaaaaacagtctaccgaacttttccagtgt
atgtatttcaaagacaaagatcccgaaactgaggatcgctgtatagcagatggtgtcatt
tattcaattagaacaaatggtgtgcttgtatttataccaaggtttgggattaaaggtgct
gcctatctgaagaataaagatggattagttatctcatgctatcaggatggatgttctgaa
tggaaacctggatcacttcaacgatttcaaaacaaaatcacttctaccacagcaggagga
gaatcaattacatttagcttgtttgatcatgtaacagtaaggatatctgtgcaggcctct
cgttgccatgctgacacaatcaggcttgaaatcatcagcaacaaaccatacaagatatcg
gagacggaactttctcaacagaattcccttttaatgaaaaatgagctagtgaaagaagta
accagatctgttgaggaagctcagcttgctcaagaagaagccaaagtcaaaatcattcaa
gaagagtatcaggaatattgccaaacaaaagggaccagcttgtatacacttctagaagaa
ataagggacttggctcttctggatgtgtcctcagattatggaatgtaa
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