Antechinus flavipes (yellow-footed antechinus): 127551295
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Entry
127551295 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127551295
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127551295
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127551295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
PDZ_Tricorn
zf-rbx1
TRAF3_RING
zf-TRAF
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127551295
NCBI-ProteinID:
XP_051836872
LinkDB
All DBs
Position
1:complement(34189426..34465421)
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AA seq
1070 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVQCQRIS
TKELNHVLPLKSLILKLDIKCDHHGRGCERVVKLQQLGEHVEMCDYSPARCRHPGCGEVL
NLKDVDSHMRERCEARPAGLCEQGCGLVLTHGELRPGAHCCFQALKAHSGALQAKVAGLE
KELKKEALRAGKREKSLVAQLAAVQLELQMTALRYQKKFTEYSARLDSLSRSVASPGSKG
EEMKTMTLVLHRDSGSLGFNIIGGRPCVDNQEGSSSEGIFVSKIVDSGPAAKEGGLQIHD
RIIEVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPSLDSQLVDMGTQTDI
TFEHIMALTKMASPTPPVLDPYLLPEEHSSAHEYYDPNDYMGSIHQEMDRDELELEEVDL
YRLNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNRE
EAVALLTSEESKNVSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTASV
LQQKKREEDEGTTDTATILSNQHEKDSGVGRTDESTRNDESSRNDESSEQENNADDHTTS
SNTLGSQRKLTYSQDTLGSGDAPFSNESFISADCTDADFLGIPVDECERFRELLELKCQV
KSANPYSLYYQNSALEVSKSDPESVDRELEMLNEELRNIELECLNIVRAHKMQQLKDQYR
ESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPD
NSLRRIAESIGCQGSDGAMSASAACKASQRNLLSITESPETSSPKYSPSPKELDLSKQLE
NKEKKSSEESKSPSQSPKLGGSYLSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYA
QSQMSLVSMCKDLNASNQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSG
MTTDDDAISEMKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMN
IIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggatcgcttcgacggcgacgtggacccggacctcaagtgcaatcta
tgcaacaaggtcttggaagaccccctgactaccccgtgcggtcatgtgttctgcgccggc
tgcgtcctgccctgggtggtgcagcagggcagttgcccggtccagtgccagcggatctcc
accaaggagctcaaccacgttctgccgctcaagagcctcatcctcaaactggacatcaag
tgtgaccaccacgggcgcggctgcgagcgggtggtgaagctgcagcagctgggcgagcac
gtcgaaatgtgcgactactcgccggcacgctgccgccacccgggctgcggagaggtgctc
aacctcaaggacgtggacagccacatgcgcgagcgctgcgaagcgcggcccgccggcctg
tgcgagcagggctgtggcttggtgctgacccacggcgagctgcggcccggggcgcactgc
tgcttccaggcgctcaaggcgcacagtggcgcgctgcaggccaaggtggccggcctcgag
aaggagctcaagaaggaggcgctgcgggccggcaagcgcgagaagtcgcttgtggcgcag
ctggccgctgtgcagctggagctgcaaatgacagcgctgcgctatcagaagaagttcacc
gagtatagcgcccggctcgactcgctcagccgcagcgtcgcctccccgggcagcaagggt
gaagaaatgaaaacaatgactcttgtccttcatcgagactctggctctctgggatttaat
attattggtggccgaccgtgtgtggataatcaagagggatcatccagtgaaggaattttt
gtatcaaaaatagttgacagcgggccagctgccaaagaaggagggctgcagattcatgac
cggattatcgaggtgaatgggaaggatttatccaaagcaacccatgatcaagctgtggaa
gctttcaagacagccaaagaacccattgttgtccaggtcttaagacggacccctcgaaca
aagatgtttactccttcactagactcccagctggtagatatgggcacccaaactgacatc
acctttgagcatatcatggcactgactaagatggcatcccccaccccaccagtattggat
ccatatctcttgcctgaagagcattcatctgctcatgaatactatgatccaaatgactac
atgggaagcatccatcaggagatggacagagatgagttagaactggaggaggtggatttg
taccgactgaatagccaagacaaactcggtctcaccgtgtgttaccggacagatgatgaa
gacgacattgggatttatataagtgagattgatcccaacagcatcgccgcaaaggatgga
cgcatccgagagggagaccggatcatccagattaatggtatagaagtacaaaaccgagag
gaagctgtggcgcttctcaccagtgaagagagcaagaatgtctcattgctaatagcaaga
cctgaactccagctggatgaaggatggctggatgacgatagaaacgattttctggatgac
ttacacatggacatgctggaagaacagcaccaccaagctatgcagttcacagccagcgtg
cttcagcagaaaaagcgtgaggaagacgaaggcaccacggacaccgccacgatcttgtcg
aaccagcacgagaaggacagcggcgtggggcgcacggacgagagcacccgcaacgacgag
agctcccgcaacgacgagagctccgagcaggagaacaacgccgatgaccacaccacgtct
tccaatactctggggagccagaggaaactgacgtacagccaggacacccttggcagcgga
gacgcgcccttcagcaacgagtcctttatttcagccgactgcacggatgctgacttcctt
gggatcccggtggatgagtgcgagcgctttcgggaactcctcgaactcaagtgccaggta
aagagtgccaatccatacagcctgtattatcagaacagtgccctcgaagtgagcaagagc
gaccccgagagcgtggacagagagctggagatgctgaacgaagagcttcgcaacatcgag
ctggaatgtctgaacattgtccgggctcacaaaatgcagcagctgaaggatcagtatcgg
gaatcgtggatgctgcacaacagcggattccggaattacaacaccagcattgacgtccgc
agacacgagctctcggacatcacggaactccccgagaaatctgacaaagatagttccagc
gcctacaacactggagagagctgtcgcagcaccccgctcaccctcgagatctccccagat
aactccctgcggagaatcgcagagagcatcggctgccagggcagcgacggggccatgagc
gcctccgccgcttgcaaggcgtcccagaggaatctgctctccatcacggagagtccagag
accagcagccccaagtactcgccctctccaaaagagcttgacctcagcaagcagttggag
aacaaagagaagaagtccagtgaggaaagcaagagcccaagccagagcccgaagttaggg
ggctcttacctgtcgccctatcaccactccccctacaagcacgctcacatccccgcccac
gcccagcactaccagagctacatgcagctgatccagcagaagtcggcggtggagtacgcc
cagagccagatgagtctggtcagcatgtgcaaggacttgaacgcctccaaccagtctgaa
ccccggatggagtggaaggtgaagataaggagcgatgggacccgctacatcaccaagcgc
ccggtgcgagaccggctcctccgcgagcgcgccctgaagatccgagaggagcgcagcggg
atgacaactgacgatgacgccatcagcgagatgaagatggggcgctattggagcaaagag
gaacggaagcagcacgtcgtgaaagcaaaggagcagaggagaaggcgcgagttcatgatg
cagagcaggctggattgcttgaaagagcagcaaggggccgaagaaaagaaggaaatgaac
atcattgaactgagccacaaaaagatgatgaagaagagaaacaaaaaaatctttgataat
tggatgacgatccaagaactcttaacccacggtacaaagtcccctgatggcactagagta
tacaattccttcttatcagtgactactgtataa
DBGET
integrated database retrieval system
