Antechinus flavipes (yellow-footed antechinus): 127551537
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Entry
127551537 CDS
T08818
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127551537
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
Other 90S particles
127551537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
OB_RRP5
TPR_14
HAT_Syf1_CNRKL1_C
ARM_TT21_N
UTP6_C
TPR_16
ARM_TT21
DUF2110
TPR_12
TPR_2
TPR_8
TPR_1
TPR_7
Motif
Other DBs
NCBI-GeneID:
127551537
NCBI-ProteinID:
XP_051837292
LinkDB
All DBs
Position
2:581502113..581539220
Genome browser
AA seq
1862 aa
AA seq
DB search
MASQEDSFPRGGSKKKAHPEKTPQQPIEHDNLFDVPTEEGSRKRKRSQEQGAKNKRSKAE
KKGSSRPEVESCGILSIEALTEGMRLLGCVKEINNLELVISLPNGLWGYVQATNISDAYT
KKLNEQLDQEEPLEDLAPLSELFPPGLLVRCVVSSLTSASKKKSIKLSLNPKDVNRVLSP
ASLKPGMLLTGTVHSVEDHGYLVDIGVTGTKAFLPWQKEQEYVKQKNKGTKLRVGQYLNC
LIEEVKGNGGSVLLSTIQSVVSAAIATEEQNWTLDNLLPGLVVKAQVQKVTPHGLTLSFF
SSFTGLVDFMHLDSKKAGHYFQTQMVRACILSVHPRTKCVRLTLRSSFLQAGRPITHLCH
HLVGAMLDDVPVQGFFAKAGATFRLKDGSLAYARIIHLSQTEKSFKPEKFKPGNMHKCRV
IDYSPMDDLALLSLKTSIIEAPFLRYHDLHPGQVVKAKVFALRSYGMIVKVTEEIKGLVP
TLHLADVQIRNPQKKYRLQDEVKCRVLTCDPENKKLLMTLKKTLVESSLPALTSYKQAKP
ELQTHGFISSIKDSGCVVKFYNDVRGLVPKRELGAQPISTPGEVFYVGQVVKVTVLNSEP
EQERMLLSFRLFSDKETEGPAQSQKKVTIKVGQLVDVKVKKKTEKGLEVSILPNNIRALL
PTTHLSDSVTNSQLLYSWLRAGDVLHRVLCLSHSDGHIVLCRKPALISAVESGQDPKVFS
EFQPGMLLTGFVKSIKAYGVFVQFPSGLSGLAPKSALSDKFVTTVSDHFVEGQTVVAKVT
NVYEEKERMLLSLRLSDVCQEDAAVSSLALLSQWLEELQGVRSLMSSRDSMLTQTLAEIT
PGLLMDLVVQDMSSDGSLMFSSGSVPGLVLRASKYHQGGKVMDPGQRTKAVVLHVDTLKS
EVHVSLRQELVNRKSKQLKKNTEHRAVIEHLEKTFAIGSLMETGQLVAFPVTSHLNDTFR
FDSEKLQVGQRVSLIIKSAKPSDIGLFLAVESSVKKRTPALPLADPEPAGEEPGVVSSLL
EKPTLPIGEMVTGTVKSVKATHVVVTLENGLVGCIHASQILDDVPLGTQPTAKLKVGKPV
TARVIGQRTLLTHKTLPISHPSSAQTVSELSIRSSELEKDISIDPSTPCSSPTEKLRQYL
PGQTVICFMRKFNVIKKWLEVEITPDIRGRIPQLLTSLSFKVLKHPEKKFKIGQALSATV
VGPESSKGFLTLSLIGPHRLEEGEVAMGRVVKVIPKEGLQVLFPFGTIGKVSIFHLSDSY
LEAPLEGFHPEKIVRCCVLSTKDPVLTLSLRQSRTNPRMKNKIEDPEVNSIKNIKEGQHL
RGYVEAVKKLGVHFRIGPTLVGRVKYRHVTKYFLSDKTLYRTYLPEGKLLSAKVLRVNRK
QKLVYLSFLPKDTGKPDVFPDSLGLPLRDQGKDRVKEVPSSQPKKKRKLEGKEEEDEGDS
STKQEEEKQQESKAKARRAEKAANTGKRKMPQMEREQEKVTKKKRPNLPEEDDSGVEVNY
NEEKRLKQPKQKQTKPTEIPRLQLSSGFVWDVSLDMLAPAAPPREESSDSEEESSSQATL
KKKSKKDKELEKQQAEKELTRIETALMDPNWQPETADDFDRLVLSSPNSSILWLRYMAFH
LHATEIEKARAVAERALKSISFREEQEKLNVWVALMNLENMYGSKETLSKVFERAVQYCE
PLKVFFQLADIYSKSEKYQAAEEVYNQMLKRFRQEKTVWIKYGSFLLKRGKSEACHDLLP
RAFSCLPQKEHVDVISKFAQLEFYLGDAERGKAMFESTLNSYPKRTDVWSIYIDMLIKFG
SQKEVRDAFERVVHLSLSPKRMKFFFKRYLDYEKQHGTAETVQAVKEKALSYVEARSTLA
DS
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccaggaagacagcttccctcgagggggttcaaaaaagaaagctcatccagaa
aaaactccccagcagccaattgaacatgataatttatttgatgttcctactgaggaagga
tcccgaaaaaggaaaagaagccaagaacaaggtgctaaaaataaaaggtcaaaagcagaa
aaaaaggggtccagcagacctgaagtagagtcgtgtggaatcctcagcattgaggctcta
actgagggaatgcggctcctgggatgcgtgaaagagataaacaatctggagcttgtgatc
agtctgcctaatggcctctggggatatgtgcaagcaactaatatctctgatgcctatacc
aagaaactgaatgaacagttggatcaggaggagcccctggaggacctggctcctttgtct
gagttattcccgccaggattgctggtgcgctgtgttgtcagcagcctcacatctgcctca
aagaagaaaagcatcaagctgtccctgaaccccaaggatgtcaacagggtgctcagccct
gcgtccctgaagccaggcatgctgctcacaggcacagtacacagtgtggaagaccatggt
tacctggtggacattggtgtgacggggaccaaagccttcctgccttggcagaaagagcag
gagtacgtcaaacagaagaataaaggtactaagctgcgtgtgggccagtatctgaactgc
ctcattgaagaagtaaaaggcaatggggggagtgtccttctgtccactatacagtctgtg
gtttctgcggccattgctacagaggaacaaaactggactttggataacctattaccagga
ttggtggttaaagctcaagtgcagaaggtgacccctcatggtctcaccctgagtttcttc
tcttcattcactggactggttgactttatgcacttggattctaaaaaggcaggacattac
ttccaaacccaaatggtgagggcctgtatcctctcagttcatccacgtaccaagtgtgtc
cgactaacattgcgctcttccttcctgcaagctggccgcccaatcactcacctctgccac
catctcgttggagccatgttggatgatgtgcctgtccagggcttctttgcaaaggctggt
gccaccttcagactgaaggatggatctctggcctatgctaggatcatacacctctcccag
actgagaagtcctttaagccagagaagttcaagcctggcaatatgcacaagtgtcgggtt
attgactacagcccaatggatgacctggcgttgttgtctctgaaaacgagcatcatcgaa
gctccattcctgagatatcatgacctccacccagggcaggttgtcaaggccaaggtgttt
gcactgagatcctatgggatgattgtgaaggtgaccgaggaaatcaaaggccttgtgccg
accttgcacttggctgatgtccagatccggaatcctcagaagaaatatcgtctccaagat
gaggtcaagtgccgggttctgacatgtgaccctgagaataagaaactactaatgaccctg
aaaaagactctggtggaatccagcctcccggctcttacgagctacaagcaagccaagcct
gagctgcagacgcacggcttcatcagcagcatcaaggactcgggctgtgtcgtcaagttt
tataacgatgtgaggggactggtaccgaagagggagctcggggcccagccgatctccacc
cccggggaggtgttctacgtgggacaggtagtgaaggtcacagtgctgaacagtgagccg
gagcaggagaggatgctcttgtccttcaggctgttcagtgacaaagagacagaaggccca
gcccagagtcagaagaaagttaccatcaaggttggacagttagtagatgtgaaggtgaag
aagaagactgagaagggattagaggtgtccatcctacccaacaatatccgtgccttgctt
cccacaacacatctatcagacagtgtcaccaacagtcagctgctctactcctggcttcgg
gcaggtgacgtcctccacagggtcttgtgtttgagccatagtgatggtcacattgtcttg
tgcaggaaaccagccctgatctctgctgtggagagtggccaggatcccaaggtcttttct
gaattccagcctgggatgctgctgactggttttgtgaaaagtatcaaggcctacggtgtc
ttcgtccagtttccatcgggccttagtggattggctcccaagtctgccctgagcgacaag
tttgtgaccacagtcagcgaccactttgtggaggggcagacagtggttgcaaaggtgacc
aatgtgtatgaggagaaagaacggatgctgctttccctgcgcctgtccgatgtttgccag
gaggatgcagccgtcagctccctggccctcctgagccaatggttggaggagctgcaaggg
gtccgaagcctcatgagcagccgagactccatgctgactcaaacgctggctgaaattacc
ccggggctgctcatggatctggtggtgcaagacatgtcaagtgatggctctctgatgttc
agcagtggctcggtgcctggcctggtgttgagggccagcaaatatcaccagggagggaaa
gtgatggatcctgggcaaagaacaaaagctgttgtccttcatgttgatacactgaagtct
gaggttcatgtttcccttcgccaggaactggtgaacagaaaatccaagcagctgaagaaa
aacactgagcaccgagcagttatagaacatttggaaaagacatttgccataggctccttg
atggagactggacagcttgtagctttcccagtgacctctcacctcaatgacaccttccgt
tttgactcagagaagcttcaggttggtcagagggtctccttgatcatcaagagcgcaaaa
cccagtgacataggcctcttcttagccgtggagagttcggtcaaaaagaggacgccggct
ctgcccttggcagatccagagcctgcaggggaagagccaggagtggtgagctcgcttcta
gagaaacccaccctgcccattggggaaatggtcactggaaccgtgaagtctgtcaaggcc
acccatgtggtagtgaccctcgagaacggtctggttggctgtatccacgcctcccagatt
ctggatgatgtgcctcttggcacccagcccactgccaagcttaaagttgggaagccagtc
actgctcgagtgattggccagagaactttattaactcacaagactctcccaatcagccat
ccatcaagtgcacagactgtctctgagctgagtattcgatcaagtgagctggagaaagac
atcagcattgatcccagcactccttgctctagccccacagagaagctcagacaatacctt
cctggccagacggtgatttgttttatgagaaagttcaacgtgatcaaaaaatggcttgag
gtggagataactcctgatatccggggaagaatccctcagctcttgacttctctcagtttc
aaggttctgaagcatccagagaagaaattcaagattggccaagccctgagtgctactgta
gttggcccggaatcctcaaagggattccttactttgtctctcataggtcctcataggttg
gaagaaggagaagtagccatgggccgcgtggtgaaagtgatccccaaggaggggctgcaa
gtcctcttcccctttgggacaattgggaaagttagcatctttcacctgagtgactcttac
cttgaggcacccctggaaggcttccaccccgaaaaaattgtccggtgttgtgtgctctcc
accaaagaccctgtgctgactctgtcactgagacagtccaggacaaaccccaggatgaaa
aacaaaatagaagaccctgaagtgaattcaatcaagaatattaaagaagggcagcattta
cggggctacgtggaggctgtcaagaagctgggggtgcacttccgcattggccccacactt
gtgggacgggtcaagtaccggcatgttaccaagtacttcttgtctgacaaaactttgtac
cgaacttacctcccagaaggaaagctgctttccgccaaggtcttgagggtgaaccggaag
cagaaactggtgtacctgtccttcctccccaaagacacgggcaagcccgatgtatttccc
gactctttgggcctgccactgcgggaccagggcaaggaccgggtcaaggaggtgcccagt
agccagcccaagaagaagcggaaactggaaggcaaggaggaggaagatgagggagactct
agcacaaaacaggaggaggagaagcagcaggagtcaaaggccaaggccagacgagcagag
aaggcagcaaacacagggaagcggaagatgccccagatggaaagagaacaggaaaaagtg
accaagaagaaaaggccaaacctgcctgaagaagatgatagtggagtggaagttaactat
aatgaggagaagaggctgaaacagcccaagcagaagcagaccaagcccacagaaattccc
aggctgcagctgtcttcgggcttcgtgtgggatgtgagtctggacatgcttgccccagcc
gcgccgccccgagaggagagttcggacagtgaagaggagtcgtcgagccaagccacgctg
aagaagaaaagcaagaaggacaaggagctagagaagcagcaggcagagaaggagctgaca
cgcatcgagacagccttgatggatcccaattggcagcctgagaccgccgatgactttgac
cgcctggtcctgagctcccccaacagctccatcctgtggctgcggtacatggccttccac
ctgcacgccacagagatcgagaaagcccgggcggtggccgagagggccctcaagtccatc
tccttcagagaagagcaggagaagctaaatgtgtgggtggccctaatgaacctcgagaat
atgtatggctccaaagagacgctgagcaaggtctttgagcgggctgtgcagtactgtgag
cccctgaaggtcttcttccagctggctgacatctacagcaagtcagagaagtaccaggct
gctgaagaagtctacaatcagatgcttaaacgtttccgacaagagaagactgtctggatc
aagtatggctccttcctccttaagaggggaaaatctgaggcctgtcatgacctgctgccg
cgggccttcagttgtctgccacagaaagaacatgtggacgtcatctccaagtttgcccag
cttgagttctacctgggagatgccgaacgaggcaaggccatgtttgagagcaccttgaat
agctaccccaagcgtacagatgtatggtccatctacattgacatgctcatcaagtttggg
agccagaaggaagtgagggatgcctttgagcgagtggtacacttgagtctgtcccccaag
cggatgaaattcttcttcaaacgctacctagactatgagaagcagcacggcacagctgag
acggtgcaggctgtcaaggagaaggccttaagctatgtggaggccaggagcactcttgct
gacagctag
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