KEGG   Antechinus flavipes (yellow-footed antechinus): 127551744
Entry
127551744         CDS       T08818                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:afz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afz03036]
    127551744
   03400 DNA repair and recombination proteins [BR:afz03400]
    127551744
Chromosome and associated proteins [BR:afz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127551744
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127551744
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT TOR1L1_N Dopey_N
Other DBs
NCBI-GeneID: 127551744
NCBI-ProteinID: XP_051837740
LinkDB
Position
2:complement(614162931..614187858)
AA seq 1027 aa
MAAAADEALAPAGALGGLVQDFVAGHQDGPAAEVAADVKSGRCTVLQVVEALGSCLENPE
PRTRGRGIQLLSQVLLQCHPLLLEKEVVHLTLFYENQLKDHHLVIPSVLQGLRALSMSDV
LPPGLAVSVLKAIFQEVHVQSLTQMDRHTVYSIITNFMRTREEELKGLGADFTFGFIQVM
DGEKDPRNLLVAFRIVYDLISKDYSLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDL
ILSLRAVLASTPRFAEFLLPLLLEKVDSEMLSAKLDSLQTLNACCAVYGQKELKDYLPSL
WTSIRREVFQTSSERVEAEGLAALHSLSACLSRSVLEADAEDLLDSFLGSILEDCRHHLC
EPDMKLVWPSAKLLQAAAGASARACDRVTSTVIPLLLEQFNRHSQSSQRRTILEMLLGFL
KLQQKWGNEDKDEILLSTFKTPLCSLVSLALADPSTQLQLVAIRALTVLGAQPGLLSTQD
LELAIDHLYRLSFLEEESQSCLAAMEASGTLATLYPTVFISHLVPRLAEELHTGDTELAS
GEGPSYQARRLRCLQALSAVSTHASIVRETLPLLLQYLRHVHRGKNADSSEVIAVCRSLH
LVAGQCQQEPESCWYFHQTAVPCLLALAVQASMPEKDLPSPGKLLLEEEVLAAMVSVIST
ASTHLSPELAAQSVALVVPLFLDGDVSFLSENSFPSKFLPFQNSSSEQKRLVALLMAFVC
SLPKNVEIPQLDRLMQELLTLSCHHDRLFSCTAAAKCFAGLLNKHPAGQQLDEFLQKAME
KVEAGLSPGPCRSQAFTLLLWVTKALVLRYHPLSSRLTERLMGLLSDAELGPAAADGFSL
LMADCPDVLHRAGHAEIRIMFRQRFFTDSVPALVQGFHAAPQNVKPNYLKGLSHVLNSLP
KPVLLPELPTLLSLLLEALSCTDCVVQLSTLSCLQPLLLDAPQVMSLHIDTLVTKFLNLS
CSPSMAVRIAALQCIHALTRLPTPVLLPYKMQVIRALAKPLDDKKRLVRREAVTARGAWF
LLGSPGS
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggccgcggccgcggacgaggcgctggccccggcgggcgccctgggaggtctcgtccag
gactttgtggctgggcaccaggatggcccggcggcagaggtggcggcagatgtgaaatct
ggtcgttgtactgtattacaagtggtggaagcccttgggtcttgcctggagaatccagaa
ccccggactcgaggtcgagggatccagcttctgtcccaggtgctccttcagtgtcatccc
ttgctcctagaaaaggaagtggtacacctgaccctcttctatgagaatcagctcaaggac
catcacctggtgatcccatctgtgctgcaaggtctgcgagcactgagtatgagtgatgtg
ctccctccaggcctggctgtatctgtgctcaaagccatctttcaggaagtgcatgtacag
tctctgacacagatggatcgacacacagtctacagcatcattaccaatttcatgcgcacc
cgagaagaagaactgaagggcctgggagctgattttacctttggcttcatccaggtaatg
gatggggagaaagatcctcgaaatcttctggtagccttccgaattgtctatgacctcatt
tcaaaggattatagcttaggaccttttgtagaagaactatttgaggtgacatcctgttac
tttcctgttgattttactccaccacctaatgacccccatggtatccaaagagaagatctc
atcctgagtctccgggcagttctggcttccacacctcgatttgctgagttcctgctgccg
ctgctgctcgaaaaggtagactctgagatgctcagtgccaaactggactccttgcagacg
ctgaatgcctgctgtgctgtgtatgggcagaaggagctgaaagactacttgcccagtctg
tggacctccatccgtagagaggtcttccaaacatccagtgagcgggtggaggctgaaggc
ctggcagccctgcactccctgtctgcgtgtttgtctagatctgtgctggaggctgatgca
gaggacctcctagactcctttctcggcagcatcctggaggattgcaggcaccacctttgt
gaacctgacatgaagctggtgtggcctagtgccaagctgttacaggcggccgcaggggca
tccgctcgggcctgtgaccgcgtcaccagcactgtgatacccttgcttctggaacagttc
aatcggcacagccagagcagccagagacggacaatactagagatgcttctgggtttctta
aaactacagcaaaagtggggaaatgaggacaaagatgaaatactcctgagtaccttcaag
accccgctgtgttcactggtctccttggccctggcagaccccagtacacaactccagcta
gttgccatccgtgccctcacagtcttgggtgcccagccagggctgctgtctacccaggac
ctggaactggcaattgatcatctttacaggctgagcttcctggaggaggagtcccagagt
tgtttggcagctatggaagcatcagggacgctggccaccctctatcccacagtcttcatt
agccacctggtgccccggctagcagaggagctccatacaggggacacagagttggccagc
ggggagggaccttcataccaagccagacgcttgcgctgcctacaggccctgtcggctgtg
tctacacatgccagcattgtcagggagacccttcccctgttgttgcagtacctccgtcac
gtgcacagagggaaaaatgccgactccagtgaggttattgcagtatgccgaagtctccac
ctggtggcggggcagtgccagcaggagcctgagagttgctggtacttccatcagacagct
gtcccttgcctacttgccttggctgttcaggcatccatgccagagaaagacctccccagt
cctgggaagctgctattggaggaggaggtcttggctgccatggtctctgtcatcagcaca
gccagcacccacctaagtcctgagctagctgctcaaagtgtggcccttgttgtgcctttg
ttcttggatggtgacgtatcctttctctctgaaaacagcttccccagcaagttcctcccg
ttccagaatagctcctcagaacagaagcggctggttgcacttcttatggcctttgtttgc
tctctgcccaagaatgtggagatacctcaactggacaggcttatgcaagagctgctaact
ctgagctgccaccatgacaggctcttctcctgcactgctgctgccaagtgttttgcgggg
ctactcaataaacacccagcagggcagcagctagatgaattcctacagaaagctatggaa
aaagtagaggctggcctgagcccggggccctgtcggagtcaggctttcacactgctcctc
tgggtgacaaaggctttagtactcagataccaccctctcagctcccgcctcacagagagg
ctaatgggccttttgagtgacgcagaattgggccccgctgcagctgatggcttctccctt
ctgatggccgattgcccagatgtgctgcaccgagctggccacgctgaaatacgcatcatg
ttccgccagcgcttcttcacggacagtgtgcccgccctggtccagggtttccacgctgct
cctcagaacgtgaagccaaactacttgaagggtttgtctcatgtactcaatagcctgccg
aaacccgtgctcctgccagagttaccgacgttactttccctgttgcttgaggctttatcc
tgcacagactgtgtggtacagctctccaccctcagctgccttcagcctcttctactagat
gccccacaagtcatgagtcttcacatcgacacccttgtcaccaagttcttaaacctcagt
tgtagcccttctatggctgttcggattgctgcattacagtgcatacatgcactcaccagg
ctgccaactcctgtgctcctgccctacaaaatgcaagtgatccgggccttggccaagcca
ctggatgacaagaaaaggctggtccgcagagaagcagtgactgccaggggggcatggttc
ctcctggggagcccaggcagctga

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