Antechinus flavipes (yellow-footed antechinus): 127551798
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Entry
127551798 CDS
T08818
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127551798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127551798
03400 DNA repair and recombination proteins [BR:
afz03400
]
127551798
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127551798
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127551798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
127551798
NCBI-ProteinID:
XP_051837841
LinkDB
All DBs
Position
2:617789748..617900604
Genome browser
AA seq
1465 aa
AA seq
DB search
MMPNEDTQHSGQTQEKDLNSQSFNNAEETTIGPEDNAALDKMEESFTPSAFNNRPSTSSV
VGMFEVPRKGPPVLHIDRQQIQSVEHSAQAVELKDLGVDVYDQDVLEQGVLQQVDKAIHE
ANRAAQLAEAEKEYHSVLDDLRSCTTSLKQINTIIEHLSPQAVNNKDVNRKLDSVKRQKC
NKEKQLKKIKAKQKRLQAILGGAEREIEEHLVDLEEDEEPGPSSLGSMLMPAQETEWEEL
IRTGQMTPFGTQIPQNQEKKPRKLMLNEASDFEKYLADQAKLSFERKKLCIQKKKKIQTS
VDSNTIPTSDKKEKNKTNGKQLKTDKHLKKHIKKLQKRAVQFQGKIEFLKEKKTLESKKA
KYDQGSESEDSEYIPEEEEEEEEEEELALHTTHKQDHTLKCVSKQRRQQNKTAAEEIDDE
YLPSSGEEESIGKNGKIKRCRDDGDGNYYKQRLRRWNKQRLEDKEQRRKAEEESEESDAE
FEEGFRMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYS
KIRTRGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYANKKVTLIR
EIARCHGILITSYSYIRLMQDSINNHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII
LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC
VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQTFIDSKEVYSILNGE
MQVFSGLVALRKICNHPDLFSGGPKIIKGILDDELEEADQFGYWKRSGKMIVVESLLKIW
HKQGHRVLLFSQSRQMLHLLEVFLRAREYSYLKMDGTTTIASRQPLITRFNEDTSIFVFL
LTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK
IYHRQIFKQFLTNRILKDPKQRRFFKSNDLYELFTLSSPDESQSTETSAIFAGTGSDVQA
PKHHSKRKFPNSFPVADREGVNQADVSSECSTLSDANISESTADLSQEKYKEKETDDNMQ
TQDKCAFINTFSTSDESSKIVTILGNEEKLNSLGFTESFSSTGDEGLDTKQLPYEKKSLQ
AKPDGSIESEQTENRFCKHKSKTKHHFVEGKDTLKHKGQKQNSHTGKHSKDAKFEGTRIP
HLVKQKQYQKHDEEKEENEQKHDDYVLEKLFKRSVGVHSVMKHDAIMEASSPDYVLVEAE
ANRVAQEALKALKMSRQRCLTAVSGVPTWTGSNGLSGAPAGGKSRFGQKRNPSLPAPQPS
SKPTKQKGQDADLKNATQTHFSGKTEDGESSSGALASSSLLASMRTRNHLTLSQRPENEN
VNLQQASAPLSTVTEHDDLLVEMRNFIAFQARIDGQASTQEILQEFESKLSTSQSCVFRE
LLRNLCTFHRGVNGEGVWKLKPEFC
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaacgaagatactcaacactcaggtcaaactcaagagaaagatttaaatagc
caatctttcaacaatgctgaagaaactaccattggtcccgaagacaatgcagctcttgat
aaaatggaagaaagtttcactccttctgcttttaataataggccatccacttcttcagtg
gttggtatgtttgaagtcccaagaaaaggaccgccagtgttgcacatagacagacaacaa
attcagtctgtagaacatagtgctcaagcagttgaactcaaagatttgggagttgatgtc
tatgaccaagatgtgttagaacaaggagtgcttcaacaagtagataaagcaattcatgaa
gctaacagggcagctcaattagctgaagcagaaaaagaataccattcagtgttagatgat
ctcaggtcatgtacaacatctctaaagcaaattaatacaattattgagcatcttagtcct
caagcagtcaacaacaaagatgtcaacagaaaactagattctgtaaagagacagaaatgt
aacaaggaaaaacaactaaagaagattaaagccaaacaaaaacgtcttcaagctatactt
ggtggagcagagagagagattgaagaacatcttgtagatttagaagaggatgaagagcct
gggccatcatctcttgggagtatgctcatgccagctcaggaaactgaatgggaagagctt
attcggactggtcagatgaccccttttggtacacaaatccctcagaaccaagagaaaaag
cctagaaaattaatgcttaatgaagcatcagactttgaaaaatatttggcggatcaggca
aaattatcatttgagaggaagaagctatgcatacagaaaaaaaagaaaattcagacttca
gttgattcaaatacaatcccaacttcagataaaaaagaaaagaacaagaccaatgggaag
cagttgaaaacagataagcatttgaaaaagcatattaagaaacttcaaaagagggctgtt
cagttccagggtaaaatagaatttctaaaggaaaagaaaacattggaatcaaagaaggcc
aagtatgatcaaggaagtgaaagtgaagattcagagtatatacctgaggaggaggaagaa
gaggaggaagaggaagaactggcactccatactacacataagcaggatcatacattgaaa
tgtgtctccaagcagaggaggcagcagaataaaactgcagcagaggaaattgatgatgaa
tatcttcccagctctggagaagaagaatccataggaaaaaatggcaaaatcaagaggtgc
cgagatgatggagatggaaattattataaacaacggttaaggaggtggaataaacagagg
ttggaagacaaagaacaacgtagaaaagctgaagaagaatctgaggaaagtgatgctgaa
tttgaagaaggttttagaatgccaggttttttgttcaaaaagctttttaagtaccagcag
acaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctgggagat
gagatgggattgggcaagaccatccagataattgccttcttggcaggtctgagctacagc
aagatcaggactcgtggttcaaattacagatttgagggattgggtccaactgtaattgtg
tgtccaacaacagtaatgcatcagtgggtgagagaatttcacacttggtggcctccattt
agagttgcaattttacatgaaactggatcatatgcaaacaaaaaggtgacacttattcga
gaaattgcaagatgtcatggaattttgattacttcatattcctacatccgactgatgcaa
gatagtattaataatcatgattggcattatgtgatcctggatgagggacataaaatccga
aacccaaatgctgcagttacacttgcttgcaaacagtttcgtactcctcatcggattatt
ttatctggctctcctatgcaaaataacctcaaagaattatggtctctctttgactttgtc
ttcccgggaaaattggggacattgccagtgttcatggaacaattttctgttccaattacc
atgggagggtattcaaatgcttctcctgtacaggttaaaactgcttataaatgtgcatgt
gttttacgagataccataaacccatatctgctgcgtcgaatgaagtcagatgtaaaaatg
agcctttctttgccagataaaaatgaacaggtcttattttgccgcttgacagatgaacaa
cgtaaagtatatcaaaccttcatagattccaaagaagtctacagcattcttaatggagaa
atgcaggttttttcaggacttgtagcattacgaaaaatatgcaatcaccctgatctcttc
tctggaggtcccaagattataaaaggtattctagatgatgaattagaggaagctgaccag
tttgggtactggaaacgctctggaaaaatgatagtggttgaatctttgctaaaaatatgg
cacaagcaaggtcatcgagtgttattgttttctcagtcaagacagatgctacatctactt
gaagtatttcttagagcacgagaatattcctatctcaagatggatggaactactacaata
gcttcaagacagcctcttatcacgagattcaatgaggacacttccatatttgtctttctt
cttaccactcgtgtgggtggaataggagtcaacttaacaggagcaaacagagttattatc
tatgaccctgattggaatcccagcacagacacgcaggctcgagagcgtgcttggagaata
ggccagaagaaacaagtgactgtttataggctcctgactgcaggtaccattgaagaaaag
atttatcacaggcaaatcttcaagcagtttttgacaaacagaatactgaaagatcccaaa
caaagacgttttttcaagtccaatgatctttatgagctgtttactctcagtagtcctgat
gaatctcaaagcactgaaactagtgctatttttgcaggaactggttccgatgttcaagca
cctaaacatcattcaaaaagaaaatttcctaactcctttcctgttgctgatagagaaggt
gtgaaccaagcagatgtttcttcagaatgcagcactttatctgatgccaacatatctgaa
tccactgcagatttgtctcaagaaaaatacaaggaaaaagaaacagatgataatatgcaa
acacaagataaatgtgcatttataaatacattttccacatcagatgaatcatcaaagatt
gtaacaattttagggaatgaggaaaaattaaattctttgggtttcactgaaagcttcagt
tctactggagatgaaggtttagatacaaagcagcttccttatgagaagaaaagcttgcag
gccaaaccagatggcagcattgagagtgagcagactgagaaccggttctgtaaacacaag
tcaaaaacaaaacatcattttgtggaaggaaaggatactctaaagcacaaaggacagaag
cagaactctcatacaggcaaacattccaaagatgccaagtttgaaggaacacgcatccca
caccttgttaaacagaaacagtaccagaagcatgatgaggaaaaagaggaaaatgagcaa
aagcatgacgattatgttctggaaaagcttttcaaaagatcagtaggagttcacagtgtc
atgaaacatgatgctattatggaggcttccagtccggattacgtattagtggaagcagag
gcaaatcgagtagcccaggaggcattgaaagcactgaagatgtctcgtcagcgttgcttg
actgctgtctctggggtgcccacatggacgggcagtaatggtctgtcaggtgcaccggct
ggaggaaagagtagatttggacagaaaaggaatcctagcttgcctgctcctcagccttct
tcaaagcctacaaaacagaagggtcaggatgctgatttaaaaaatgccactcaaactcat
tttagtgggaaaacagaagatggagaatcttcatctggtgctttagcttcatcatcacta
ttagctagcatgagaactagaaaccatcttactttatcacagagaccagaaaatgaaaat
gtgaaccttcagcaggcttctgctccattatccactgtaacagagcatgatgaccttttg
gtagaaatgaggaacttcatagctttccaggctcgcattgatggacaggcaagcacacaa
gagattctgcaggaatttgaatccaagttatccacatcacaatcgtgtgtgtttcgagaa
cttctgagaaatctttgcacgtttcatcgaggtgtgaatggtgaaggtgtgtggaagctg
aagcccgagttctgctga
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