Antechinus flavipes (yellow-footed antechinus): 127552426
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Entry
127552426 CDS
T08818
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127552426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afz03400
]
127552426
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127552426
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
127552426
NCBI-ProteinID:
XP_051838912
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Position
1:54841169..54866314
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AA seq
922 aa
AA seq
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MARKRVACEEQLGQRRPKKSRNQEAELDVFEDEKPKKIRVPRVPGGKRKKRSSSPGGPSI
SASKKVGAKAKKKSENHPSVKEEASSEEDDFTNFTSVPKKEIPPKIEPSFKKDSSEENDE
DESEDDWEEVEELNEPGPDEVGETAAAFRPALPAEPVEIEIETPEQAKARERREKRQVEF
ETYLRRMMKRFNKEVREDTHKVHLLCLLANGFFRNTVCNEPDLQAIGLSIVPAHFTKVLP
NKVDESYLSKLVKWFIATFTVNAELSTDERDSLGSTLERRFAIYSAQNEEELVHIFLLIL
RSLQLLTRLVLSLQPIPLKLLAAKGKKKSQDNSLKNARSSSQSPSQKIQTQTKAETSPGQ
AVASCRRAAESKKSAPAKTAAGRKNQPPPGKEKPGAQRPARERRRMPKVSYREESGSDGA
RSSADSELSGEDDGGSSDEESRPGPRRPRRPPASLRRGAAPGGSPPAKSQRAGGPASALP
AAPPEACPGTKRGKILSSDEAEEDDDVRKATGVDQWLEVFCEGEDRWVCVDCVHGVVGQP
LACYKYASKPLCYVVGIDNAGCARDVTQRYDPAWMTATRKCRVDSEWWAETLRPYQGPSG
ARESKEELEFQAKLESQPLPTAIGLYKNHPLYALKRHLLKYEAIYPESAAILGYCRGEAV
YSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRARKARLADPQLRDQDDLGLFGH
WQTEEYQPPVAVDGKVPRNEFGNVYLFVPSMLPIGCVQLKLPNLHRVARKLGIDCVPAVT
GFDFHSGYSHPVTDGYIVCEEYKEVLLAAWDNEQSLIEQKEKEKREKRVLGHWKLLVKGL
LIRERLKLRFGDKGEAVAATSEGGAGFSSDEEGTSSQAAAKTLAASWPQNRETEEQQKLK
GTRKTKREKKEEAKHLFPFEKL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaagcgggtggcctgcgaggagcagctgggccagcggcgccccaagaagtcc
cggaaccaggaggcggagctcgatgtatttgaagatgagaagccaaagaaaatccgtgtc
cccagagtcccaggtgggaaaaggaagaaaaggagcagtagccctggggggccctcaatc
agtgcatcaaagaaggtgggagccaaggcaaaaaagaaatctgaaaaccatcccagcgtg
aaggaggaagcctctagtgaggaagatgatttcacgaactttacaagtgttccaaagaag
gagatcccaccaaagatagaaccatcatttaaaaaagacagcagtgaggaaaatgatgaa
gatgaaagtgaagatgactgggaggaggttgaagaacttaatgagcccggaccagatgaa
gtgggagaaaccgcagccgcctttagaccagctctgcctgccgagccagtggagatagag
attgaaacgccggagcaggcaaaggcgcgcgagaggagagaaaaaaggcaggtggaattt
gagacgtaccttcggagaatgatgaagcgcttcaataaggaagtccgtgaagatacacat
aaggtccatctgctttgtctactagcaaatggtttctttcggaatactgtctgtaacgag
ccagacctccaagccatcggcctctccatcgtcccagctcacttcaccaaagtgcttcct
aataaagtggatgagtcttacctttcaaaactggtaaaatggttcatcgccacgttcacc
gtcaatgccgagctttccacggatgagcgagacagcttgggttccaccttggaaaggcgc
tttgctatttattcagcgcaaaatgaggaagaattggtccatatatttctgttgatacta
cgatcactgcagcttctgacccggctggtgttgtctctgcagcccattcctttgaaattg
ctagctgcaaagggcaagaaaaagtcccaggacaattccttaaagaatgctagaagttct
tctcagtcccccagccaaaagatccagacccaaactaaagcagagaccagcccaggacaa
gccgtagcctcttgtaggcgggcagcagagagcaaaaagtcagcgcccgccaagacagcc
gcgggcaggaagaatcagcccccccccggcaaggagaagccgggcgcccagagacccgcc
cgggagcggcggaggatgccgaaggtgtcctacagggaggagagcggcagtgacggggcc
cggagcagcgccgactcggagctctctggcgaggacgacgggggctcctctgatgaggag
tctcggcctggcccccggagaccgcggaggccgccggcgtccctgaggagaggggcggcg
ccggggggcagcccgccagcaaagagccagagagcaggcggtccggcctccgcccttccg
gcagcgccccccgaggcctgccccggcaccaagaggggcaagatcctttctagcgatgaa
gcagaagaagacgacgacgtcaggaaggcgactggtgtggaccagtggctagaagtgttc
tgtgagggggaggataggtgggtatgtgtcgattgtgtccatggcgtggtgggccagccc
ctggcctgttacaaatacgcctccaagcccctgtgctacgtcgtgggcatagacaacgct
gggtgcgcccgggatgtcacacagcgctatgacccggcctggatgacagctacccgcaag
tgccgagtagactcagagtggtgggctgagaccctgagaccctaccagggcccttccggg
gccagggagagcaaagaagagctggagtttcaggcgaagctagagagccagcccttgccc
actgctatcggcttgtataagaaccacccactttatgccttgaagagacatctcctgaaa
tacgaggccatatacccagagagtgccgccatccttgggtactgtcggggggaagctgtg
tactctcgggactgtgtccacaccctgcactcaagggatacctggttgaagcaagcgcga
gtggtcaggcttggggaagtcccctacaagatggtaaaagggtattccaatcgtgcccgg
aaggctcggctggcagatccccagttgcgggaccaggacgacctgggtctgtttggccac
tggcagaccgaggagtaccagccgcccgtggcggtggacgggaaggtcccgcggaatgaa
tttggaaacgtgtacctcttcgtgcccagcatgttgcccatcggctgtgtccagctgaag
ctgcccaacctgcatcgagttgctcgaaagctgggtatcgactgtgtcccggctgttacc
ggctttgacttccacagcggctactcacatcctgtaactgatgggtacatcgtgtgtgaa
gagtacaaggaagttctcttggctgcctgggacaatgagcagtcactcattgaacaaaag
gagaaagagaaaagagagaagagagttctggggcactggaagttactggtgaaaggactc
ctcataagagagagattgaagctccgctttggtgacaagggtgaagctgttgcagcaact
tcagagggaggagcaggattctcatcggatgaggaaggaaccagctcacaggcagcagcc
aaaactctggctgcctcctggccccagaaccgagaaaccgaagagcagcagaaactgaaa
ggaactcggaagaccaaaagggaaaagaaagaggaagccaaacacctgtttccctttgaa
aagttgtaa
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