Antechinus flavipes (yellow-footed antechinus): 127552912
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Entry
127552912 CDS
T08818
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04390
Hippo signaling pathway
afz04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
127552912
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
127552912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127552912
Transcription factors [BR:
afz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127552912
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127552912
NCBI-ProteinID:
XP_051839195
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Position
3:39353520..39360076
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AA seq
349 aa
AA seq
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MYNMLETDLKPPGPQQTSGGGGGGGGGGGGGGGPNSTSAGGTNQKNSPDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYTLPGGLLAPGGNSMGGGVGVGAGGLGGGVNQRMDSYAHMNGWSNG
GYGMMQEQLGYPQHPGLNAHNAAAAAAAAAAAAQMQPMHRYDVSALQYNSMTSSQTYMNG
SPTYSSMAYSQQAAPGGGAGGGGGGAMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAG
DLRDMISMYLPGAEVPEPAAPSRLHMSQHYQGAPVPGTAINGTLPLSHM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagaccgatctcaagcctcccggcccgcagcaaacttcggggggc
ggtggcggcggcggtggaggaggcggcggtggcggcggccccaactccacgtcggcgggc
ggcacgaaccagaagaacagtccggaccgcgtaaaacggcccatgaacgcttttatggtg
tggtcccgcgggcagcggcgtaagatggcccaggagaaccccaagatgcacaactcggag
atcagtaagcggctgggcgccgagtggaagctgctgtccgaggccgagaagcggcccttc
atcgacgaggccaagcggttgcgcgccttgcacatgaaggagcatccggactacaagtac
cggccgcgccggaaaaccaagacgctgctcaagaaggacaaatacacgttgcccggcggc
ctgctggctcccggaggcaacagcatgggcggcggcgtcggcgtcggggccggcggcctg
ggcggcggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
ggctacggcatgatgcaggagcagctgggctacccgcagcacccgggtctcaacgcgcac
aacgcggcggcggcggcggcggccgcggccgcggcggcccagatgcagcccatgcaccgc
tacgacgtgagcgccctgcagtacaactccatgacgagctcgcagacttacatgaacggc
tcgcccacctacagcagcatggcgtactcgcagcaggccgcccccggcggcggagctggc
ggaggcggcggcggcgccatggccctgggctccatgggctccgtggtcaagtcggaggcc
agctccagcccccctgtggtcacctcgtcgtcgcactccagggcgccctgccaggccggg
gacctgcgggacatgatcagcatgtacctgcccggcgccgaggtgcccgagcccgcggcg
cccagcagacttcacatgtcccagcactatcagggcgcgccggtgccgggcacggccatc
aacggcacgctgcccctgtcgcacatgtga
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