Antechinus flavipes (yellow-footed antechinus): 127553008
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Entry
127553008 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127553008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127553008
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127553008
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
HECT type E3
127553008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
127553008
NCBI-ProteinID:
XP_051839329
LinkDB
All DBs
Position
3:52196492..52367265
Genome browser
AA seq
2069 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKAYSPPESRKSISKAPKVQ
SNTTSEQSRGHISKRSCSSSSAVIVPQPEDPDRANTSEKQKTGQVPKKDSSRGVKRSASP
DYNRTNSPSSAKKPKALQHTEPSSETNKPHSKSKKRHLDQEQQLKSAPLPSTSKAHTRKG
GATGSSRSQKRKRTESSCIKSGSVSESTSAEERSAKPTKLASKSATSAKAGCSTITDSSS
SASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTSGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKPSKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDSNQDGVNSSAARTDEPPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSPP
KACTNGSGTLGSSTTISTGTATAASNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIE
PARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRL
CTATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSDKDAVSRD
IRIKRFLHVFFSSPLPGEEPIGRLEPMGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAV
RQFSIQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGSKDSVGGKRGRAQTAP
TKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSPPENITFEDPSLDVILLLRVLHAISR
YWYYLYDNAMCKEIIPTGEFNNSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLTNPKGS
QEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFY
KWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLNMN
GCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVARQFDSFRD
GFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKYLFEIL
SGFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataaggcatatagccctcctgagagtagaaaatctatttctaaggcacccaaagtgcag
tctaatactacttctgaacagtcaaggggacacatttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaagatccagacagagccaatacttcagaaaagcaa
aaaacggggcaagtgcctaagaaagacagttctcgaggagtgaagcgcagtgccagtcca
gattacaacaggacgaattctccgagctctgctaagaaacccaaagccctccaacatacc
gaaccttcctcagaaaccaacaaaccccattctaaatcaaagaagagacatttagaccaa
gagcaacagctgaaatctgcaccattgccatcaacaagcaaggcacacaccagaaagggt
ggagctaccggtagttcacgaagtcagaaaaggaaaaggacagaaagttcttgtataaag
agtggttcagtgtctgaatcaactagtgctgaagagcgatcagcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
tctgcctcgacatcttcctcatcttctgcagttgcctcagcttcctccactgttccacag
ggggccagagtgaaacaaggaaaagaccaaaacaaagccaggcgctcccggtcagcatca
agtccaagtccccgaagaagtagccgggaaaaggagcagagtaaaaccagtggctcttct
aagtttgattgggctgcccgttttagccccaaagttagcctgcctaaaacaaaactgtct
ctaccagggtcttctaagtcagagacatcaaaacctggaccttcaggattacaagctaaa
ttagcaagtttaagaaaaccttctaagaagcgcagtgagtcaccacctgctgagctcccc
agtttgcggcggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaaaagaggagcggctgaagctcgccgacaggagaagatggcggac
cctgacagcaaccaggatggagtgaactcatcagctgcgcgcacagatgaacctccacaa
ggagccgcagcttctagttctgttgctggggctgtaggcatgaccacctctggtgagagt
gagtcagatgattcagagatgggaagactgcaagctctgttagaggctaggggtcttcct
cctcacctgttcggccctcttggtcctcggatgtcacaacttttccacaggacaattgga
agtggagctagttctaaggcccagcagcttctacaaggactacaagctactgatgaaagt
cagcagcttcaggcagtgattgagatgtgtcaattattggtcatgggaaatgaggagacg
ttgggagggtttccagtaaaaagtgtggttccagctttgataacactgctgcagatggag
cataattttgatattatgaaccatgcctgtcgagccttaacatacatgatggaagcactt
cctagatcatctgctgtggtggtagatgccattcctgtttttttggaaaaactacaagtg
attcagtgtattgatgtggcagaacaggctttaactgccttggagatgctgtcgcgtaga
catagcaaagccattcttcaggcgggaggtttggctgactgcctgctctatctggagttt
ttcagcataaatgcccagagaaatgctttagccatcgcagctaattgctgccagagtatc
acaccagatgaatttcactttgtggcagattccctccccttgcttacccaaaggcttacc
caccaggacaagaaatcagtagaaagtacttgtctttgttttgcacggctagtggacaac
tttcagcatgaagaaaatttgcttcagcaggttgcctctaaagatttgctcactaatatt
cagcagctgttggtcgttactccaccaattctaagttctgggatgtttattatggtggtc
cgtatgttttccttgatgtgttctaactgtccaactctagcagttcagcttatgaagcaa
aatattgcagaaacacttcacttccttttgtgtggggcctcaaatggcagctgccaggaa
caaattgatcttgttccacgaagtcctcaagaactttatgagctgacatctcttatttgt
gaactgatgccatgtttaccaaaagaaggaatttttgctgttgataccatgttgaagaag
ggaaatgcacaaaacactgatggtgcaatatggcagtggcgagatgacaggggtctttgg
catccctacaacaggattgatagccggataattgaggtagcagctcatcaggttggtgag
gatgagataagcttgtccaccttgggacgagtttatactattgattttaattctatgcag
cagatcaatgaagatactgggactgcacgtgctattcagagaaaacctaacccattagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagttaatg
aaagaagacccagaactggctaagtctttcattaagacgttgtttggtgttctttatgaa
gtgtatagttcttcagcaggacctgcagtcagacataagtgccttagagcaattcttagg
ataatttattttgcggatgccgaacttctgaaggatgtactgaaaaatcatgctgtttca
agtcacattgcttccatgctatcaagccaagatctgaagatagttgttggagcccttcaa
atggctgaaatcttaatgcagaaattgcctgatatttttagtgtttacttcagaagagaa
ggtgtgatgcatcaagtaaaaaatttagcggagtctgagactttgctaacaagtccacca
aaggcgtgcactaatggatcggggaccttgggttccagcaccacaatcagcactgggaca
gctactgctgccagcaacgcatctgcagacttgggctcacccagcttacagcacagcaga
gatgattctttagacctgagtccacagggtcgactaagtgatgtcctgaagagaaaacga
ctgccaaaacgtgggccaagaaggccaaagtactctcccccaagggatgatgacaaagta
gacaatcaagctaaaagccctactactactacacagtctcctaaatcttctttcctggca
agcttgaatcccaaaacatggggcagattaagcgcacagtccaatagcaacaacattgaa
ccagcccgtaccgccggagtcagtggtcttgccagggctgcctcaaaggacaccatatct
aacaatagagaaaaaattaagggttggattaaggaacaagcccataaatttgtggaacga
tatttcagctctgagaatatggatggtagcaatcctgcactaaatgtccttcagagactt
tgcactgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaa
atccggagcatagtttcagagtctgatgtctcctcttttgaaatccaacatagtgggttt
gtgaaacaattgctgctttacttgacatccaaaagtgacaaagacgctgttagcagagat
atcagaattaaaagattccttcacgtctttttttcttctccacttcctggagaagaacca
attggaagattggaacccatgggaaatgcacctttgttggcgttagttcacaagatgaat
aactgccttagtcagatggagcagtttccagtcaaagttcatgattttccaagtgggaat
ggaacggggagcagtttttctctcaacagaggatcgcaagctttaaaatttttcaacaca
caccagttaaaatgccaactacaaagacatcccgactgtgcaaatgtgaaacaatggaag
ggtggacctgtgaagatagaccccctggcgttggtgcaagccattgaaagataccttgta
gtcagaggctatggcagagtaagagaagacgacgaagacagtgacgatgatggttcagat
gaagaaatagatgagtctttggcagctcagttcttaaattcaggaaatgtaagacacaga
ctgcaattctacattggagatcatttactgccatataatatgaccgtgtatcaggcagtt
agacaattcagtatacaggctgaagaggagagggaatctacagatgatgaaagcaatcca
ttaggaagagctggcatctggacaaagactcacacgatatggtataaacctgtaagagaa
gatgaagatggcagtaaagattctgttggtggtaaaaggggaagggcccaaacagctcca
acaaaaacttcccctagaaatgcaaaaaagcatgatgaattgtggcatgatggagtatgc
ccatcagtatcaaatcctttagaagtttacctcatatcttccccacctgaaaatataacc
tttgaagacccttcattagatgtgatcctccttttaagagttttacatgccatcagtcgt
tattggtattatttatatgataatgcaatgtgcaaggaaattattccaactggcgaattt
aacaacagtaaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaatcatg
acaggaaacatcccaacatggctcacagagcttggaaaaacctgcccatttttctttcca
tttgacactcggcaaatgcttttttatgttactgcattcgatcgagaccgggccatgcag
aggttacttgacaccaaccctgaaattaatcagtcagactctcaggatagcagagttgcc
cctcgacttgataggaaaaagcgaactgtgaatagagaagagcttttgaaacaagcagag
tctgtgatgcaggatcttggcagctcaagggcaatgttggaaattcagtatgagaatgaa
gttggtacaggtcttgggcctacactggaattttatgcacttgtatctcaggaactacag
agagctgacttaggcctctggagaggcgaagaagtaactcttactaatccaaaaggaagc
caagaagggaccaagtatattcaaaacctccaaggcctgtttgcacttccctttggcaga
acagccaaaccagcgcatattgctaaggttaagatgaagtttcgctttttaggaaaatta
atggccaaggctatcatggatttcagattggtggaccttccccttggcttgcctttttat
aaatggatgcttcgacaagaaacttcacttacatcacatgatttatttgatattgaccca
gttgtagcaagatcagtatatcatctagaagatattgtcagacaaaagaaaagacttgaa
caagataaatcacagaccaaagagagtctacagtatgcgttggaaaccttgaatatgaat
ggctgctcagtggaagatctaggattggatttcacactaccaggatttcccaacatagaa
ctaaagaaagggggaaaggatatacctgtcaccatccacaatttagaagagtatctacga
ctggttatattctgggcactaaatgaaggtgttgccaggcagtttgattcattcagagat
ggatttgaatcagtctttccactcagccatcttcagtacttctatcctgaggaactggat
cagcttctgtgtggcagtaaagcagacacttgggatgcaaagacactgatggaatgctgc
aggcctgatcatggctatacacatgacagtcgagctgtgaagtacctgtttgaaattctc
agtggttttgataatgagcagcagagattatttctccagtttgtgactggtagcccaaga
ttgcctgtaggaggcttccgaagtttgaatcctcctttgacaattgtccgcaagaccttt
gagtcaacggaaaatccagatgacttcttgccctcagtaatgacttgtgtgaactatctc
aagttgccagactattcaagtattgagataatgcgtgaaaaactgttgatagctgccaga
gaggggcagcagtcattccatctttcctga
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integrated database retrieval system
