Antechinus flavipes (yellow-footed antechinus): 127553222
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Entry
127553222 CDS
T08818
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05014
Amyotrophic lateral sclerosis
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127553222
05022 Pathways of neurodegeneration - multiple diseases
127553222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127553222
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127553222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
127553222
NCBI-ProteinID:
XP_051839731
LinkDB
All DBs
Position
3:83592530..83662583
Genome browser
AA seq
1659 aa
AA seq
DB search
MDSQEKSSAEAEGAKERGLVHVWQAGFCSITPERLPGWGGKTVLQAALGVSHGVLLTEGG
EVYSFGNLPWRTEPGEICPKSPLLENALGGQHVITVAAGSFHSGAVTENGMVYMWGQNSA
GQCAVANQHYVPEPTPINISDSETSPLLSVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGDSHSLALVQCLPSQDIKPVPERCNHCSQLLI
TMTDKEDHVIISDSHCCPLGVALSDAQAESHDSITPSTGESLENKTVSESQEEKKTLKEN
GLSVASEVDVGNIQPVNDEATHPEQKITGTTGISILGNVPSFLDNHVEKECLQKLSADSL
QGHPETSGDIEVAQPITEEPNPNLPSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALS
LKKVMNFYSIAPCESGLQSGNASLGPEGLKDSREEQVKLESMQGKKSSSLVDIREEESEG
VSRRLSLPGLLSQVSPRLLRKAARAKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG
QLGHGDVLPRLQPLCVKCLDGKEVIHLAAGGQHSLALTAKSQVYSWGSNTFGQLGHSESP
STVPRLAKICNENGIWSVAAGQDYSLFLVDTDDFQPGLYYSGRQEPVENDGLNTCTKTAT
LLVSCSKLGYISSVTAGKDSCLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRP
LLGLENLGTTTTVQLLQEVASRFSKLCYLIGQHGASLSSFLHGIKEARSLAILKHASLFL
DSYTEYCTSITNFVVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENIQLLEVLNTLFFL
PIRRLHNYARVLLKLATCFEVTSPEYQKLQDSSSCYETLALHLGRKRKEAEYTLGFWKTF
PGKMTDSLRKPERRLICESSNRALSLQHAGRFSVNWFILFNDSLVHAQFSTHHIFPLSTL
WVEPISEEVGSVNGLKITTPEEQFILVSSTPQEKTKWLRAISQAVDQALRGMSDFPPYAS
GSSVQRQEPPISRSARYTFYKDPRLKDAVYDGRWLSGKPHGRGTLKWTDGKMYSGMFRNG
LEDGYGEYKIPNKALNKDDHYVGYWKEGKMCGQGVYSYASGEVYEGCFQDNMRHGHGLLR
SGKLTSSSPSMFIGQWVMDKKSGYGVFDDITRGEKYMGMWHDDMCQGNGVVVTQFGLYYE
GTFNLNKMMGTGILLSEDDTVYEGEFSDEWTLNGKGTLTMPNGDYIEGLFNGEWGSGIKI
TGTYFKPSLYESEKDRPKVLRKLGNLAVPADEKWKAVFEECWHQLGCENPGQGEVWKAWD
NIAVALTTNRRQHRDSPEILSRSHTQTLESLEFIPQHISGAFTVEKYDEIKKYLIKACDT
PLHPLGRLIETLVAVYRMTYVGVGANRRLLQEAVKEIQSYLKRIFQLVRFLFPDLPEEGS
TIPLSAPLPQERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALEND
REEDIYWECVLRLNKQPDTALLGFLGVQKKFWPVTLSIFGDSKKVLPTTKDACFASAVEC
LQQISTTFTPSDKLKVIQQTFEEISQNVLATLQEDFLWSMDDLFPVFLYVVLRARIRNLG
SEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaagagaaaagctcagcagaggcagaaggagccaaagagagaggcttagtc
catgtttggcaggcaggattctgctctataactcccgagagactgccaggctggggagga
aagactgtacttcaagcggccttaggagtgagtcatggagtacttctaactgaaggtggt
gaagtctacagctttgggaaccttccctggagaacagaaccaggagagatctgtccaaag
agtcctcttctggaaaatgctttgggtggacaacatgttatcactgtggcagcagggagc
ttccacagtggagcagtaacagagaatggcatggtgtacatgtgggggcagaattctgct
ggccagtgtgctgttgccaatcagcactatgtaccagaaccaacacccatcaatatttct
gactctgagacaagtcctttgttatcggtcaggattttgcagttggcatgtggagaggaa
cacaccttggcactctcaataagcagagaaatatgggcatggggtacaggttgtcaattg
ggtcttatcactacaactttcccagtgacaaaaccacaaaaagtggagcatctggctgga
cgagtagtactacaagtggcctgtggtgattcccacagcttagcacttgtacagtgcctc
ccgtcacaggatataaagccagtcccagaaagatgcaaccattgcagccagctcttgatt
actatgactgacaaagaagaccatgtgatcatttctgatagtcattgttgtccattaggt
gtggcactctctgatgcccaagctgaaagtcatgattccattactccttctacaggggag
agcttggaaaacaaaacggtttctgaaagccaggaagaaaagaagactttgaaagaaaat
ggtttgtctgttgcttctgaagtggatgttggaaatatacagccagtaaatgatgaggcc
actcaccctgaacaaaagatcactggaaccacaggcatttccattttgggaaatgtgcct
tcgttccttgacaaccatgtagagaaagaatgtttgcagaagttgtcagctgattcatta
caaggacatcctgagacaagtggtgatatagaggtagcacagcctattactgaagaacca
aatcccaatctccccagcccaccaaccacaagcacatctgctctaaacagcttagtggtt
tcctgtgcctcagcagttggtgtgagagtagctgctacatatgaagcaggagcactgtct
cttaagaaagtaatgaacttttatagtatagctccttgtgaaagtggccttcagtcaggc
aatgcttccttggggccagaaggattgaaggatagccgggaagagcaggttaaactggaa
tcaatgcaagggaagaagagttcaagtcttgtggatattagagaagaggaatctgaagga
gttagcagaaggctttctcttcctgggttattatcacaagtttcccctaggctcctgcga
aaagcagcccgggcaaaaacacgaacagtggtattgacacctacatatagtggggaagca
gatgcactccttccttctttgagaactgaagtgtggacttgggggaaagggaaagaagga
cagctgggacatggtgatgttttgcctaggcttcagccattatgtgtgaaatgtctagat
ggtaaagaagtaattcatctggcagctggtggtcaacattcccttgctcttactgctaaa
tcccaggtttattcatggggtagtaatacttttggccaacttggtcattcagagtctcca
agtacagttcctcgtcttgcaaagatatgcaatgaaaatggaatctggagtgtagctgct
ggtcaggattattcccttttcttagtagacacagatgatttccagcctggattgtattat
agtggccggcaagaacctgtagaaaatgatggtcttaatacttgtactaaaactgcaaca
ctgctagtatcctgtagtaagcttggatacataagcagtgtgacagcaggaaaggacagt
tgcctagctttggtggacaaaaatattatgggatatattgccagtctgcatgagttggct
actacagaaagacgattctactcaaaactgagtgagattaaatctcagattctcagaccc
ctcttaggtttagaaaacctgggcactactaccacagtccaactgttgcaggaagtggca
agcagattcagcaagctatgttacctgattggtcagcatggagcctcactgagcagcttc
cttcatgggattaaggaagccaggagcttggccatcttgaagcatgcaagtctcttcttg
gatagttatacagagtattgtacatctattaccaattttgtggttatgggaggattccag
cttcttgccaagccagctattgacttcttaaataaaaaccaggagttattacaagatttg
tcagaggtgaatgatgaaaacatccaattgttggaagtgctaaacactttgttctttttg
ccaatcagacgtcttcataattatgcacgagttttactaaagcttgctacttgttttgaa
gtgacatctccagagtaccagaaactgcaggattctagctcttgttatgaaactcttgct
ctccatctcggcaggaaaaggaaggaagccgaatacacactgggcttctggaagaccttc
cctgggaaaatgacggattccttgaggaagccagaacgtaggctaatctgtgagagtagt
aatcgagcattatctctacaacatgctggtagattctctgtgaattggttcattctcttt
aatgattctttggtccatgcccagttctccacacaccatattttccccttgtctactctg
tgggtggaacctatttcagaagaagttggtagtgtgaatggcttaaagataactacacct
gaagaacagtttattcttgtttcatcaacaccacaggaaaaaactaaatggctacgggct
attagtcaagctgtggaccaagctctcagaggtatgtctgattttcctccttatgcaagt
ggaagcagtgttcagaggcaagaacctcctatttcacgaagtgccagatatactttctac
aaggacccccgtctaaaggatgctgtttatgatggacgatggctttcagggaaacctcat
ggcagagggaccttgaaatggactgatggaaagatgtattctggcatgttcagaaatggc
ctagaagatgggtatggagaatacaaaatcccaaataaagcactgaacaaagatgaccat
tatgtaggctattggaaagaaggaaaaatgtgtggtcaaggagtgtacagctatgccagt
ggagaggtatatgaaggctgctttcaagataacatgcgtcatggtcatggccttctacgc
agcggtaaactgacttcatcttctcccagtatgttcattggccaatgggtaatggataaa
aagtctgggtatggtgtatttgatgatatcacaaggggggaaaaatatatgggaatgtgg
catgatgatatgtgtcaggggaatggtgtggtagttacccagtttggattatactatgaa
ggaacatttaaccttaataaaatgatgggaactggcattttactttctgaagacgacact
gtctacgagggagaattttcagatgaatggacacttaatggaaagggaacactgactatg
ccaaatggtgattacattgaaggtcttttcaatggagaatggggatctgggataaaaatt
actggaacatacttcaaacccagtttgtatgagagtgagaaggaccggcccaaagttctc
aggaaactaggaaacctagcagtgcctgctgatgagaaatggaaagcagtatttgaagaa
tgctggcaccagttaggctgtgagaacccaggccagggagaagtctggaaagcatgggac
aacattgctgtggctctaaccaccaatcgtcgccagcatcgagatagtccagagatatta
agtcgttcacatacccagacactggaaagtttggaattcattccacagcatattagtggt
gcattcactgtggagaaatatgatgagataaagaaatacttaataaaggcttgtgacact
cctctgcaccctttaggtcggctcatagaaaccctagttgcagtgtatagaatgacttat
gtgggagtgggagccaatcgacgattattgcaagaagctgtgaaagagattcagtcctac
cttaagcgtattttccaactggtcaggttcctattccctgatcttcctgaagagggcagc
acaattcctctatctgctccactaccccaggaaaggaaatccttttgcacagggaagtct
gattctagatcagaatctccagaaccaggctatgtggtcacaagctctggattattgcta
cctgtgctgttaccccgactctacccaccactctttatgttgtatgccttggagaatgat
cgagaagaagatatttattgggagtgtgttcttcgactaaacaaacaaccagataccgct
ctgctgggctttctaggtgtgcaaaagaaattttggccagttactttgtcaatctttgga
gacagtaaaaaggttttgcctactacaaaagatgcctgttttgcttcagcagtagaatgt
ctgcaacaaatcagcacgacatttaccccatcagacaaacttaaagtcattcagcagact
tttgaagagatatctcagaatgtccttgctacacttcaggaagacttcctgtggtctatg
gatgacctgtttcctgttttcttatatgtggtgctacgggccaggatcaggaatttagga
tctgaagtacatctcattgaggatctaatggatccatatctccaacatggggaacaagga
atcatgttcactactttgaaagcatgttactatcagatccaacgtgaaaagcttaactaa
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integrated database retrieval system
