Antechinus flavipes (yellow-footed antechinus): 127553240
Help
Entry
127553240 CDS
T08818
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127553240
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
127553240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
127553240
NCBI-ProteinID:
XP_051839777
LinkDB
All DBs
Position
3:84823382..84895389
Genome browser
AA seq
1659 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGNTAETQCRNWLKTGNCPYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVETEPQKRNTEEPSSPVRKESSRGR
HREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENLEKREEIVIKKEISPEVVRSKLSPSPSLRKSSKSPKRKSSPKSSSSANKKDKKITA
VSSPLLDQQRSSKSNQTKKKGPRTPSPPPPIQEETALGKKHKEKHKAKERVEEKPREGKD
RGRDIERHKEKKEKQRDPSEGSHRQKRSPSPADHSGSNSSPSREYSPPAAKRRQASRAPT
KSSTQKHSFSPSRRSASPTGQRHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPVYQR
TASPPVRRTPSPYPPRSSSSPQRKRSPSRHRSPGRDKGRHDHERTSQSHDRRHERREDTR
GKRDNREKEGREEREYDQDQNSSRDHRDDRESREGRERRETRDTRDRRELKDSRDARESR
DTRDYSRDNKDNRDQRDSRSTRDAHDYRDRETRDTHRKEDLYQEDSRSYGRNHGREESSR
TETRNESRNDSRNESRSDRTGRSRGRGPELPEKGSRGTRGSQVDGHSSSGNYHESWESRS
GYPERDRYDARDQARDSSFERRHGERDRRDNRERGIKTIFVSLKEFDPRPNSPVRHQGRS
EELERDERREERRLDRTDDRRDERARERERERERDRERERERERDREREKERELERDRAR
EREREREREKDRERDRERDREHDREREREREREREKEREREREERERERERERERERERE
RGRERDKERDRQRDWEDKGREDRREKREDVREDRNPRDVHDERKSKKRHRTESSPSPRQS
PKRRREHSPDSDTYNSGDDKNEKHRLLSQVVRPQESRSLSPSHMAEDRQNRWKEEDRKPE
RKESSRRYDDQELKERVSSGEKQRGEQPEASESSRTRAQESVGHHPPEERDGSDRAHEDN
KKKSKIPKRTTKRKKEDDVGVERYSTESATEDGQVFSPKKGQKKKNVEKKRKRSKGDSDI
SDDELVQQNKRKKGPRTPPATTKEELVEVSNEKNGTTGEVSQKKEESTFSDWSDEEVPDR
GDMIIPERTTEESHRKCHRTRVEKIEAPHVTIEDAPHRKPIDQKRSSSLGSNRSNRSHTS
SRLRSPSNDSAHRSGDDLAGRKRVLHSSSRDREKTKSLEIPGERKSRIDQLKRGEPSRST
SSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRERLQERDRHEHDRERERERRETRQREW
DRDTDKDWPRNRDRLRERERERDKRRDLDRERERQNPDSSERDRDRTLDISSHIESSKRS
ETKLDEHEKDFEGICRDSVALDKERIEKDLGSLHGFDDVNEAEKTESLEAGDDETKLDDA
QSLGSGAGEGYEPISDDELDEILAGDAEKREDQQDDEKMPDPLDVIDVDWSGLMPKHPKE
PREPGAALLKFTPGAVMLRVGISKKLAGSELFSKVKETCQRLLEKPKDAENLFEHELGAL
NMAALLRKEERAGLLSNLGPCCKALCFRRDSAIRKQLVKNEKGTLKQTYTNTPVVDNELL
RLSLRLFKRKTTCHGSGQEKTEESSKLSQPSIQPEVCVS
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaagaaaggtcacagtggaaaataccaagaccatatctgatagcaca
tcccgaagaccaagtgtatttgaaaggcttggacccagcactggaaatacagctgagaca
cagtgccgaaactggctgaagactggtaactgtccctatgggaacacatgtagatttgtg
catggcccttcacctcgaggcaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggcgatcttagggaaagaatgaagaataagaggcaagatgtggaaacagagcct
cagaaacgaaatacggaggagccatcttcaccagttaggaaagaatcttcaaggggaaga
catagggagaaggaagacatcaaaatcactaaggagagaactccagaaagtgaagaagaa
aatgtagaatgggaaactaatagagatgattctgacaatggagacattaattatgattat
gtccatgaattgtcactggaaatgaagcgccaaaagattcagagagaactaatgaagcta
gaacaagaaaacttggagaagagagaagaaatagtaattaaaaaagaaatttctccagag
gtggttagatcaaaattgtctccatctccttctctaagaaagtctagtaaatctccaaag
cgaaaatcaagtccaaagtcatcctcttcagctaataagaaagataagaagataactgca
gtgtcttctcctctcttggaccagcagaggagttctaaaagcaaccagactaaaaagaaa
ggacctcgtactcctagcccacctcctcctatacaagaagaaactgctttggggaaaaag
cataaagaaaaacataaagcaaaagaacgggttgaagaaaagccaagagaagggaaagat
agaggaagggatattgaaagacataaagaaaaaaaagaaaagcagagagatccttcggaa
ggttcccatagacaaaagcgttcccccagtcctgcagatcattctggcagtaattcttcc
ccttccagggaatattcaccccctgctgcaaagagacgacaagcttctcgggctccaaca
aaatcatcgactcaaaagcattctttttctccatctcgcaggtctgcttccccaacagga
cagcgccactctcccttatcttccaggcatcattcatcttcatcacaatcagggtcatcc
attcaaagacattctccttctccccgacgaaaacgaactccttccccagtctaccagagg
acagcttctcctccagtgagacgcactccttctccttacccaccaagatcctcatcttct
cctcagagaaagagaagtccatcacgccatcgatctccaggacgtgacaaaggaaggcat
gatcatgagcggacttcacagtcacacgatcgacgccacgaaaggagggaggatactaga
ggcaaaagggacaatagagagaaagaaggtagagaagaacgggagtatgatcaggaccag
aactcttcgagagatcacagagatgacagagaatctcgggagggccgtgagcggagagaa
actcgggacactcgagatcgaagggagctgaaagactccagagacgcccgagagtctagg
gacacgagagattacagtagagataacaaagacaaccgcgaccagagggactcacgttcc
acaagagatgcccatgactacagggaccgggagactagagacactcaccggaaagaagat
ctgtatcaagaagactctcgaagttatggcagaaatcatggtagagaagagagctctcga
actgaaacaaggaatgaatctagaaatgattccagaaatgaaagtaggagtgaccggaca
ggcagaagtagaggcagaggaccagaattacctgaaaagggaagtcgaggaacaagagga
tctcaagttgatgggcatagtagtagtggaaactaccatgaaagctgggaatctcgaagt
ggatatcctgagagagaccgttacgatgccagagatcaagctagggattcatcctttgaa
agaagacatggagaaagggacagacgtgacaacagagaaagaggtatcaagaccatattt
gtatcattgaaggaatttgatccaagaccaaactcaccagtacgccatcaagggaggagt
gaagaacttgagcgtgatgaaagaagagaggaacgaagactagacagaactgatgacaga
agagatgagagagccagggaaagggagagagaacgagaaagagatagggagcgagagagg
gaaagggaacgcgacagagagagagaaaaagagagagaattagaacgagatcgtgccagg
gagagggagagagagagagagagggaaaaagacagagaacgtgatcgagagagagatcga
gaacatgatcgagagagggaacgagagagagaacgagagagggaaaaagaaagagaacgg
gagagggaagaacgggaacgagagagggaacgagaaagggagagagagcgagaacgagaa
agagggagagaaagggataaagaacgtgatcgtcagagggattgggaagacaaaggaaga
gaagatcgaagggaaaaaagagaagatgttcgagaagacaggaatccaagagatgttcat
gatgagagaaaatcaaagaagcgccatagaactgaaagcagtcctagtccccgacaatca
cccaaacggcgacgtgaacattctcctgatagtgacacctataatagtggagatgataaa
aatgaaaaacatagattgttgagccaggttgtgcgacctcaagaatctcgttcacttagc
ccctcacacatggcagaagataggcagaaccgatggaaagaggaagaccgaaagccagaa
agaaaggagagctctaggcgctatgatgatcaagaacttaaagagagagtttcttctgga
gagaagcaaaggggagagcagcctgaagcatcagaaagctcaagaactcgtgctcaagaa
agtgttggacaccatccccctgaagagcgagatgggtctgaccgagctcatgaggataat
aagaaaaagtccaaaataccaaaaaggaccactaagaggaaaaaagaagatgatgttggc
gtagaaagatatagcactgagtcagcgacagaggacggtcaagtattttcacctaagaaa
ggacagaagaagaaaaatgttgaaaagaaacgtaaaagatcaaaaggagattctgatatt
tctgatgatgaactagttcaacagaataaaaggaaaaaaggcccaagaaccccccctgca
accacaaaagaagagttggttgaagtgtcaaatgagaaaaatggaacaactggagaggtt
tcccagaaaaaagaagaatcaacatttagtgactggtctgatgaagaagttcctgaccgt
ggagatatgattatacctgaacgtacaactgaagaatctcatagaaagtgtcaccgaacc
agagtggagaaaatagaagcacctcatgttaccatagaagatgcaccgcatcgtaaacca
attgatcaaaaacggagtagcagcttggggagcaatcggagcaatcggagccatacttct
agccgcttgcgatcaccttccaatgattctgctcatcgcagtggagatgatttggctggt
cgaaagagagttctgcacagtagttccagagatagagaaaaaacaaaaagcttagaaatt
ccaggagagagaaaatccaggattgatcagctgaaacgtggagagcccagtcgcagcact
tcttcagatcgtcaagattcaagaagtcacagttctagaagaagttcccctgagtcagat
cgccaggttcattcaagatctgggtcttttgatagccgagaaaggcttcaggaacgagat
cgacatgaacatgatagagaacgggaaagggagaggagagaaacaaggcagagagaatgg
gaccgagatactgataaagattggccaagaaacagagaccgactccgggaacgagagaga
gagcgagacaaaaggagagacttggacagggaaagagagaggcaaaatcctgattctagt
gaaagagatagagacagaactcttgatatttcttcgcacatagagtcttcaaaacgcagt
gaaacaaaactggatgagcatgagaaagactttgagggaatttgcagagactctgtagct
ttggacaaagaaagaatagaaaaagacctgggatctttgcatggatttgatgatgtaaat
gaagctgagaaaactgagagcttagaagcaggagatgatgaaaccaagttagatgatgca
cagtcattaggatctggtgctggagaaggatatgagccaatcagtgatgatgaacttgat
gaaattctggcaggtgatgctgaaaagagggaagaccaacaagatgatgagaagatgcca
gatcctttggatgtaatagatgtggactggtctggtcttatgccaaaacatcctaaagaa
ccacgagaacctggagctgctctcttaaaattcacacctggagctgttatgctgagagtt
ggaatttctaaaaaattggcaggttccgaactattttctaaagttaaagaaacatgccag
aggcttttagaaaagcccaaagatgcagaaaatctttttgaacatgaattgggagcccta
aatatggcagcactgctacgtaaagaagagagagctggtcttctcagtaatcttggacca
tgttgtaaagcattatgttttaggcgggattctgcaattcggaaacagctagtaaaaaat
gaaaagggcaccttgaagcaaacatatacaaacactccagtggtagacaatgaattgctg
cggctaagtttgagattgtttaagcgcaagacaacttgccatggatctggacaggaaaag
acagaagagagcagtaaactttcacaacctagtatccagccggaagtttgtgtgtcataa
DBGET
integrated database retrieval system
