Antechinus flavipes (yellow-footed antechinus): 127553319
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Entry
127553319 CDS
T08818
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127553319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127553319
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127553319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
PDZ
PDZ_2
LIM
PDZ_6
PAZ_4
Motif
Other DBs
NCBI-GeneID:
127553319
NCBI-ProteinID:
XP_051839895
LinkDB
All DBs
Position
3:120552546..120614869
Genome browser
AA seq
1514 aa
AA seq
DB search
MVICDCDSGSDSENERRLPDIILDDLANRRFQAKKRHECSSASRQLSILKTSLSKTCSQK
FSTADPLATGFKELMSKQRRKWDTKVENRPAIKETSNSSSYLEEEEEEEEDEKATGMPNI
VKDDLYVRKLSPIVPTAGSDFDKFLPKSWIPEDVNWKRIKKTTSYKPWYKEFQGFRKNSD
SEDENSICEQNPAIFSMAQRAGRGSESNCQRRSILMDLTTKQAPKSWNRNTERKFSDASD
RSSQFLLLQALQTYSDDILSDETKTKVDPTSGPRIITCRRNVFYAPGYRRNDTENGVLDP
DLENDDYFVRKTGAFHANPVVLQTFEDFRRFAVPDDFIERDIILQQREGEPVLPDLEKDD
MIVRRIPTQKKDVPLSGAPDKYHPIPFPEPWTLPPEIRARFLCVLERTSPSKDKINSCRV
LVPSSCQKKDDMLTRKIESWKLGTTVPSISFTPGPCSEEDLKKWEAIRAASKVRHKKRQM
VERLFQKISDENGSKSLSDITAEDVHSMRQLRYEEMQKIKSQLQEQDQQWQDDLAKWKNR
RKSYTSDLQKKKEEREEIEKLSLERSQRSSKTFGEILQDREIRNQETNSHRWKTFDSERM
YSNDEIFNEAKMSPAPTLTRESYVNEGREKEVTYSSESSKEDSSNLPKMENYETAEIQVP
SQSLTEKQSSASALSSNHSLNTQMGPARVSASLPRSYQKTDTSRLTSVVTPRPFGSQSRG
ISSLPRSYTMDDAWKYNGDVEITKIITESSKSSSFSKSDDNQLHSSSALTSVEEGAKESE
KKTLPATPLCLPISQEHDAFPKSEQPLTSNSLPVSGSLEGKNSSSPEPSRTKDQFSDMRI
IMIHRPGNSDADFGFTVRWDISGIIVQSVEAGSPAALSQLQVDDEIIAVNNTKFSNKDTD
KWEEIMANARETGNLVVDVRRYGKNDWGKDQPSLPFIRHKTLNLTSMATKIIGSPETKWI
DATSGVHHTDKASNLSIRSNFSESLQNSNMETKGINGISDENSSTEPKGSSDSMAPDLPV
PTISAPSRWAWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWQRAQQEAEKENSKY
LDEEQMVLNSNSVSLTSREPTLANWERNWREEIYPSEREKNKAEEEEGLHHEEQKRKLEE
QLLLEKERKIKELEEVQQKQRAEIEEQKRRAEIEEQRRRAEIEEQRRRAEIEEQRRRAEI
EEQRRRAEIEEQRQRAEKEKETSVQIYQYKRPVDPFEVSKREESTNLLPSDRDKSRSTTE
LDQPTSRNGSNKYLDRIGNVGYSQKSSRKEQTTSEAEMERQQILQEMRKKTSLHNDNSWI
RQRSSSVTKEPICLPGIMRRGESLDNLDNPRSNSWRHAPWMNQSTGFHTSSSVQDFSRPP
PQIVSTSNRAYMRNPSSSLVPSSVASIRTGSLSSAPSPAPRTQSPSTTQSGMQQRNRSVS
GKRVCSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNNELYCN
ECYLRFKSGQPTSM
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggtgatatgtgactgtgacagtggttcagattcagagaatgaacgaaggttgcctgat
ataattttggatgacttagccaaccgtagattccaagcaaaaaagagacatgaatgctcc
tcagcatctagacagctttccatcttgaaaaccagcctgtctaagacttgttcacaaaag
ttttctacagctgatcctttagctactggattcaaggaactgatgagtaaacagaggagg
aaatgggacactaaagtggaaaacaggccagcaataaaagaaacttcaaactcctctagc
tatttggaggaggaagaggaagaggaagaagacgaaaaagcaacaggcatgccaaacatt
gtaaaggatgatctttatgtgcgcaagctaagtccaatagtgcccactgcaggaagtgac
tttgataagtttcttcccaaaagttggattccagaagatgtgaattggaaaagaattaaa
aagacaacttcttacaagccatggtataaggaatttcagggattcagaaagaattcagac
tcagaagatgagaattcaatctgtgaacaaaatcctgccatttttagtatggcacagaga
gcagggcgaggttcagagagcaattgccaaagacgttcaatcttgatggatctcactacc
aaacaagcccccaaatcatggaacagaaatacagaaaggaaattcagtgatgcttctgat
agatcaagtcagtttttattacttcaggccttacaaacatattctgatgacatcttgtct
gatgaaacaaagactaaagttgatcccacttctggcccaaggatcataacatgccgaagg
aatgtcttttatgccccgggttacagaagaaatgatactgagaatggagtattagatcct
gacttagaaaatgatgattactttgttaggaagactggggctttccatgcgaatcctgtt
gttcttcaaacttttgaagattttagaagatttgctgtaccagatgatttcatagagaga
gatataattctgcaacagagagaaggtgaacctgtacttccagatttagaaaaagatgac
atgattgttcgcagaattccaacacagaagaaagatgtgcctttatctggagccccagat
aaatatcacccaatcccctttccagaaccttggactctcccaccagaaatccgagccaga
tttctctgtgtacttgaaaggacatccccatcaaaagacaaaattaatagctgtagagta
ttagttccttcttcttgtcaaaagaaggatgatatgttgactcgtaagattgagtcctgg
aagctaggaacaactgtaccatccatcagttttactcctgggccatgcagtgaagaggac
ttaaaaaaatgggaggctatccgagcagccagcaaagttaggcacaagaaacgacagatg
gttgagagactctttcaaaagatttctgatgagaatgggagcaaatccttgagtgatatc
actgcagaagatgtacacagtatgcgccaactacgctatgaagaaatgcagaaaataaaa
tcacaattgcaagaacaagaccagcagtggcaggatgacctagcaaaatggaaaaatcgt
cgaaaaagctatacttcagatctacaaaagaaaaaggaagagagggaagaaattgaaaag
ctgtctcttgagaggtctcagaggagctcaaaaacatttggagaaattctccaggaccgg
gaaatcaggaaccaagaaaccaacagtcatcgttggaaaacatttgattctgagagaatg
tattctaatgatgagatattcaatgaagcaaaaatgtctcctgcgccaactttgacaaga
gaaagttatgtgaatgagggaagagagaaggaagtaacttatagttcagaaagtagtaaa
gaagattcttcaaaccttcccaagatggagaactatgaaacagctgaaattcaagttcct
tctcaaagcctgacagagaaacagagctcagcctcagctttgtcttccaaccattcactg
aatacacaaatgggacctgctcgggtttcagcatctctccccagaagttaccagaaaact
gatacatctaggttaacatcggtggttacgccaagaccttttggttcccagtcaagaggg
atctcatcacttcccagatcttatacgatggatgatgcttggaagtacaacggagatgtg
gaaatcactaaaataattacagaaagttcaaaaagtagctctttctcaaaatcagatgac
aaccagcttcactcaagctcagccttaacaagtgttgaagagggagcaaaagaaagtgag
aagaaaacactacctgctacacccttgtgtttgcccatttcccaggaacatgatgctttc
cctaaatcggaacaacctttaacatcaaactctttaccggtttctggatctttagaaggg
aaaaattcttcatcacctgagccttcaaggacaaaggatcagttcagtgatatgagaatc
attatgatccaccgccctgggaacagtgatgctgactttggatttacagtaagatgggat
atttctggaatcatcgtgcaatcagttgaagcaggtagcccagcagcattatctcaacta
caggtagatgatgaaattattgctgttaacaacaccaagttttcaaataaggacacagat
aaatgggaagagatcatggctaatgcacgagaaactggaaacttagttgtagatgtcaga
cgttatggaaaaaatgactggggcaaagaccaaccttccctgccatttatacggcataaa
actctcaatctcaccagtatggctaccaaaattataggttcacctgaaactaagtggatt
gatgcaacttctggagttcaccatacagacaaggcttcaaatctttcaataagaagtaat
ttctccgaaagtcttcaaaattctaatatggaaacaaaaggaataaatggcataagtgat
gaaaatagctctactgaacccaaaggaagttctgattctatggcacctgatcttccagtt
ccaaccatcagtgctcccagtcgctgggcttgggatcaagaggaagagaggaaacgacag
gaaaaatggcaaaaagaacaggatcgtttgttgcaggaaaagtatcaacgtgaacaggaa
aaactgagggaagagtggcagagggctcaacaagaggctgagaaggagaactcaaagtac
ttagatgaggaacagatggtattaaattcaaatagtgtttctctcacctcgcgtgagcct
acacttgccaactgggaaagaaattggagagaagaaatttatccttcagaaagggaaaaa
aacaaagcagaggaggaagaaggactccatcatgaagaacaaaaaaggaaattagaagag
caacttctccttgagaaagagaggaaaataaaggaactggaagaagtgcaacagaagcaa
cgggcagagatagaggaacagaagcgacgggcagagatagaggaacagaggcggcgggca
gagatagaggaacagaggcggcgggcagagatagaggaacagaggcggcgggcagagata
gaagaacagaggcggcgggcagagatagaagaacagaggcagcgggctgagaaagaaaaa
gaaacatccgtgcagatatatcagtataaaaggcctgttgatccttttgaagtatcaaag
cgagaggaatcaacaaatctacttcctagtgacagggataaatcaaggtctactactgaa
ttagatcagcccacaagtagaaatggaagtaataaatatttggaccggattgggaatgtt
ggctattcacagaaaagttctcgaaaagagcagaccacatcagaagctgagatggagaga
caacagatccttcaggaaatgaggaagaaaacctctctccataatgacaacagctggatt
agacagcggagttctagtgtcaccaaagagcccatctgcttgcccggcatcatgagaaga
ggtgaatctctagataatctagataatcctagatcaaattcatggagacatgccccttgg
atgaatcagtctacagggtttcatacttcttcatctgtgcaagacttcagtcgtccacct
ccacaaattgtatctacatccaaccgtgcttacatgcgaaatccatcttccagtttggta
ccttcttctgttgcttctatacgaactggatctttatcatcagcaccttccccagcacct
cgaacacaatccccttctactactcagtcagggatgcagcaacgaaacaggtcagtcagt
gggaagagagtatgctcctactgtaataacattctgggcaagggagcggccatgatcatc
gagtctttggggctttgttatcatttacattgttttaagtgtgtggcctgtgagtgtgac
ctcgggggctccagctcaggagcagaagtcagaatccgaaataatgaattgtactgcaat
gagtgctatctccgattcaaatctggacagccaacctccatgtga
DBGET
integrated database retrieval system
