Antechinus flavipes (yellow-footed antechinus): 127553480
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Entry
127553480 CDS
T08818
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127553480
Transcription factors [BR:
afz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127553480
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Paralog
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Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127553480
NCBI-ProteinID:
XP_051840177
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Position
3:170142123..170216951
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AA seq
394 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLTGQTGAGGGGGGGGGGGGGGGGSNKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLTAGAGGGGPAVGVGMGVGVSPAGVGQRLESPGGTAS
GGYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGAGGAHHHPHAHPHHPHHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLSYGAAAAAAAAAGGPHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAASAA
AAAAAAAQSRLHSLPQHYQSASTGVNGTVPLTHI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaacggacttgcattccccgggtggggcccaggcccccacg
aacctaacgggccagaccggggctggcggaggaggagggggcggtggcggcggcggcggc
ggcggcggaggcagcaacaaagccaaccaggaccgggtcaagcggcccatgaacgctttc
atggtgtggtcccggggccagcggcgcaagatggctcaggaaaaccccaagatgcacaac
tcggagatcagcaagcggctgggggccgagtggaaagtcatgtccgaggcagagaaacgt
cctttcatcgatgaggcgaagcgtctgcgggctctgcacatgaaggagcacccggattat
aaatatcggccccggcgaaaaaccaagaccctcctcaagaaagacaagtattcgctggcc
gggggcttgctgacggccggtgccggaggcggaggcccggcagttggggtaggcatggga
gtgggagtgagtcctgctggtgtgggtcagcgtctggaaagtcccggaggcacagctagc
ggaggctacgcgcacatgaacggctgggccaatggagcctaccctggttccgtggcggcg
gcggctgccgcggcagcaatgatgcaggaagcgcagctcgcctacagccagcacccgggc
gccgggggagctcaccatcacccccacgcgcacccccaccaccctcaccacccgcacaac
ccacagcctatgcaccgctacgatatgggcgcactgcagtacagccccatctccaactcg
cagggttacatgagcgcctcgccctcaggctacgggggcctttcgtacggcgccgcggct
gccgcagcggctgccgcgggcggcccacaccagaactctgcagtggcagcggcggcagct
gcagcggccgcgtcgtcaggcgccttgggcgcgctgggctctctagtcaagtctgagccg
agcgtcagtcctcctgtcacctcgcattctcgggctccgtgccccggggacctgcgcgag
atgataagcatgtacttacccgccggggaaggaggggacccggcggccgcttcggcggca
gcggcagccgcggctgcggcacagagccgactgcattcgctgccccagcactaccagagc
gccagcactggagtcaatggcactgtccccttgacacatatttag
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