Antechinus flavipes (yellow-footed antechinus): 127553556
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Entry
127553556 CDS
T08818
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127553556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127553556
Cell adhesion molecules [BR:
afz04515
]
Immunoglobulin superfamily
ROBO family
127553556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
127553556
NCBI-ProteinID:
XP_051840315
LinkDB
All DBs
Position
3:complement(185527594..185992103)
Genome browser
AA seq
1638 aa
AA seq
DB search
MCVRASVDSQICGHRFTPSWHETVCRSHQRTMIAESAHFYLFGLICLCSGSRLRQEDFPP
RIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDSRSHRMLLPSGSLF
FLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAV
MECQPPRGHPEPTISWKKDGLPLDDRDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGE
RESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVLIVRWRKDDGELPKSRYE
IRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFIVKPRDQVAALGRTV
TFQCEATGNPQPAIFWRREGSQNLLFSYHPPQSSSRFSVSQTGDLTITNVQRSDVGYYIC
QTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPGNQTVAVDGTLVLNCVATGSPVPTVLW
RKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCVASTPSGEATWSAYVEVQEFGVP
VQLPRPTDPNLIPSAPSKPEVTEVNRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQ
TVAENVKTETFATKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDIPPTSQGVDHKQ
VQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGTNHGESEWLVFEV
RTPTKNSIVIPELKKGVIYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTISKND
GNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTVDGSTFSVIIPSLIPGIRY
SVEVAASTGAGSGVKSEPQFIQLDFYGNPVSPDQVSLAQQISDVVKQPAFIAGIGAACWI
ILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNINE
PVTQPWLADTWPNTGNNHNDCSINCCTASNGNSDSNLTTYSRPADCIANYNNQLDNKQTN
LMLPEPTVYGDVDLSNKINEMKTFNSPNLKDGRFVNASGQPTPYATTQLIQSNISNNINN
GSGDSNEKQWKPSSQQKQEVAPIQYNIMEQNKLNKDYRTNDTIPPTIPYNQSYDQNTGGS
YNSSDRGSSTSGSQGHKKGARTPKLPKQTGMNWADLLPPPPAHPPPHSNSEDYSLSVDES
YDQEILCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQE
ELQPMLQDCPDDMGHVQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDVPEE
EDEADIEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSV
SSSDGSFFTDADFAQAVAAAAEYAGLKVAKRQMQDAMGRRHFHGSHCPRPTSPLSTDSNM
STAVMQKVRPAKKQKHQQGHLRRELYTDDLPPPPVPPPAIKSPTVQSKGQLEVRPIVLPK
LPNAETRTDRSSERKGSSYKGREALDGRQVFEMRTNLDHRDSQELQSDAKARGNKASKRE
VLPAKTHLVQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGRQRDQTNVSRRNVAELQM
LGAYEKEVDNEELEETES
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcgcgcaagtgtggattcgcaaatttgtgggcaccgttttaccccctcttgg
catgagactgtttgcagaagtcaccagaggacaatgatcgctgagtctgctcacttttat
ctctttggattaatatgtctctgttcaggctcccgtcttcgtcaagaggatttccctcct
cgtattgttgaacatccttcagatctcattgtttctaaaggcgaaccagctactttgaac
tgtaaagcagaaggcagacccacaccaactattgaatggtataaaggaggagaaagagtg
gaaacagataaagatgactctcgttcacatcgaatgttacttcctagtggatctttattt
ttcttacgtatagtacatggacgcaaaagtagacctgatgaaggtgtttatatctgtgta
gcacggaattatcttggagaagctgtgagccataatgcatcactggaggtagcaatccta
cgagatgacttcagacaaaacccttcagatgtaatggtggcagtaggagaacctgcagtg
atggaatgccagcctcctcgaggccatcccgaacctacaatttcatggaaaaaagatgga
ttaccattggatgatagagatgaaagaattactatccgaggaggaaagctcatgattaca
tatactcgtaaaagtgatgctggcaaatatgtttgtgttggaacaaatatggtgggagag
agagagagtgaagtagcagaactaaccgttttagagagaccatcatttgtgaagagacct
agtaacttggcagtaacagtggatgatagtgcagaatttaaatgtgaggcccgaggtgac
cctgtgctcatagtaagatggagaaaagatgatggagagcttcccaaatccagatatgaa
atccgagatgatcatacattaaaaatccggaaagtaatggcaggagatatgggatcatac
acatgtgttgcagaaaatatggttgggaaagctgaagcatctgcaactctaacagttcaa
gaacctccacactttattgtgaaaccccgtgatcaggttgctgcattgggtcgaactgta
actttccagtgcgaggcaactggaaaccctcaaccagccattttttggaggagagaagga
agtcagaacctgcttttttcataccatcctccacaatcttctagccggttttctgtctcc
caaactggggatcttactatcacaaatgtccagcgatctgatgtagggtattatatctgt
cagactttgaatgttgcgggaagcattatcacaaaagcctacttggaagttactgacgtg
attgcagaccggcctcccccagtcatccgacagggtcctgggaatcagacagtagcagta
gatggtactttagtcctcaactgtgtggccacaggcagtccagtgcccacagttctatgg
agaaaggatggtatcttgatctctacccaagattctcgcatcaaacaactggaaacagga
gcactgcagatccgttatgccaagctgggtgacactggtcgatatacctgtgttgcatca
actcctagtggtgaagcaacatggagtgcatatgtcgaagttcaagaatttggagttcct
gttcagcttccaagacccactgacccaaatttaatcccaagtgccccatcaaaacctgaa
gtcacagaagtcaacagaaacacagtaactttgtcatggcaaccaaatttgaattcaggt
gcaacgccaacatcttatatcatagaagccttcagccatgcatctggtagcagctggcaa
actgtagcagaaaatgtgaagacagaaacatttgcgactaaaggattaaaacctaatgca
atttaccttttccttgtgagagctgctaatgcatatggtcttagtgatccaagtcaaatt
tcagatcctgtgaaaactcaagatattccaccaacaagtcaaggtgtggatcacaagcag
gtccagagagaactgggcaatgttgttttgcaccttcataatcctaccatcctttcatct
tcttcaattgaagttcattggacggtggatcaacagtctcaatatattcaaggatataaa
attctctataggccttctggtactaaccatggagagtctgagtggctagtttttgaagtt
agaacaccaacaaaaaatagcattgttatcccagaactcaaaaaaggagtaatctatgaa
attaaagctcggcctttctttaatgaatttcaaggagcagatagtgaaataaaatttgca
aaaaccctcgaagaagcaccaagtgctccaccccagagtgtaacaatatcaaagaatgat
ggaaatggaactgcaattctagtaacgtggcagccacccccagaagatacccaaaatgga
atggtccaagaatataaggtttggtgcctgggcaatgaaagtcgataccatataaacaag
acagtggatggttctaccttttctgtaattattccatctctaattcctggtattcgatat
agtgtggaagtagcagccagtacaggagcaggatctggtgtgaaaagtgagccacaattt
atccagttagacttctatgggaatcctgtgtcaccagatcaagtcagtcttgctcagcag
atttctgatgttgtgaagcagccagcatttatagcaggtattggggctgcctgttggata
atccttatggtcttcagcatctggttgtatcgtcatcggaagaaaaggaatggactcact
agtacatacgctggtatcagaaaagtcccgtcttttaccttcacaccaacagtaacttat
cagagaggaggcgaagcagtgagcagtggaggcaggccaggacttctcaatatcaatgaa
cctgtcactcagccatggctagcagatacttggccgaatactggaaataatcacaatgat
tgttcaatcaactgttgtactgcaagcaacggaaacagtgatagcaacctgacaacttat
agtcgcccagctgattgtatagcaaattacaacaaccagctggataacaaacaaacaaat
ctgatgctgcctgagcctaccgtgtatggtgatgtggacctgagcaacaagatcaatgaa
atgaaaaccttcaatagtccaaacctgaaggatggtcgatttgttaatgcatcagggcaa
cccactccttatgccaccactcagctcatccagtcaaacatcagcaacaacattaacaat
ggcagtggagattccaatgaaaaacagtggaaaccctctagtcagcaaaagcaggaagtg
gcacctattcaatataacattatggagcaaaacaaattaaacaaagattaccgaacaaat
gataccatcccaccaactattccatacaatcagtcttatgaccaaaatacaggaggctcc
tacaatagttcagatcgaggcagtagtacatctgggagtcaaggtcacaaaaaaggggca
aggacaccgaagttaccaaaacaaacgggtatgaactgggcagacttgcttccacctcct
ccagcacatcctcctccccatagcaatagtgaagattacagtctttctgtagatgagagc
tatgaccaagaaattctatgtccagtgccaccagcaaggatgtatttacaacaagatgaa
ctagaagaagaggaagatgaacgaggtcctactccaccagttcgtggagcagcttcatct
ccagcagcagtatcctatagccatcagtctactgccacacttacaccctcaccccaagaa
gaacttcagcctatgttgcaagattgcccagatgacatgggccatgtgcaacaccagcct
gacaggagacgtcagcctgtaagtcctccaccaccaccaaggccaatttctccaccacat
acctatggttatatttcaggaccccttgtttcagatatggatactgatgtaccagaagaa
gaagatgaagctgacatagaagtagccaaaatgcaaaccagaaggcttcttttacgtggg
ctagaacagacccctgcttctagtgttggtgatttggaaagctctgtaactggctccatg
ataaatggctggggttcagcctcagaagaagataacatttcaagtgggcgttccagcgtt
agttcttctgatggctcattttttactgatgcagattttgcacaggctgttgcagcagca
gctgaatatgctggtcttaaggtagcaaaacgtcaaatgcaagatgctatgggccgcaga
cattttcatggatcacactgtcctagacccaccagccctctatccacagacagtaatatg
agtactgctgtgatgcagaaggtccgaccagccaagaaacaaaaacaccagcaaggacat
ctgcgcagagaactctacacagatgatcttccccctcctccagtgccaccacctgctata
aaatctcccactgtccaatctaagggacagctggaagtacgacctatagtgttgccaaaa
ctccccaatgcagaaacaagaacagacagatcatcagaaagaaaaggaagcagctacaaa
gggagagaagcattggatggaaggcaagtttttgagatgaggacaaatctagaccacaga
gattcacaagaactccaaagtgatgctaaagcacgaggaaacaaggcatcaaagcgagaa
gttctaccagcaaaaactcatcttgtccaagaagatatcttaccatactgtagacctaca
tttccaacatcaaataatcccagagatccgagttcttcaagctcaatgtcatctagaggt
tcaggaagacaaagagatcaaacaaatgtaagtcgaaggaatgttgcagaattgcagatg
cttggagcatatgaaaaagaagtggataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system
