Antechinus flavipes (yellow-footed antechinus): 127553648
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Entry
127553648 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127553648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127553648
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127553648
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127553648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127553648
NCBI-ProteinID:
XP_051840499
LinkDB
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Position
3:211237247..211431559
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AA seq
667 aa
AA seq
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METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNSPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWVLCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCLEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattggagtcggaactgacctgccctatctgtctggagctatttgaagaccca
ttactgctgccctgtgcccatagcctctgtttcaactgtgcacatcgaatcctagtctcc
cactgcgccaccaacgaatctgtggaatccatcactgccttccagtgccctacttgccgt
tatgtcatcaccctcagtcagagaggtctagagggactcaagcgtaacgtcaccctgcaa
aacattatcgacaggtttcagaaggcttctgtgagtgggccaaattctcccagtgagacc
cgccgagagcgggccttcgatagcaacaccatgacctccagcgagaaagttctctgtcag
ttctgtgaccaggaccctgcccaggatgctgtgaaaacctgtgtcacttgtgaagtgtcc
tactgtgaggagtgcctgaaagcaactcacccgaataagaagcccttcacaggccaccgt
ctcattgaaccgataccagattcccacatcagagggctgatgtgtctggagcatgaggat
gagaaggtgaatatgtactgtgtgacagatgaccaactaatctgtgccttatgtaaactg
gttgggcgacaccgagatcatcaagtggcggctttgagtgagcgctatgacaagttaaag
caaaacttagaaagtaacctcaccaaccttattaagaggaatactgaactcgaaacactt
ttggcaaaactcattcaaacttgtcagcatgttgaggtcaatgcatcacgacaagaaacc
aaactgatggaagaatgtgacctactcattgaaatcatccaacagagacgccaaattatt
ggaaccaaaatcaaagaagggaaggtggtaagacttcgaaaactggcccagcagattgca
aactgcaagcaatgtattgaacgctctacatcactcatctcccaagctgaacagtccctg
aaggagaatgaccatgccagattcttacagacagcaaaaaatatcactgaaagggtctct
atggcaactgcatcctctcaggtcctaattcctgaaattaacctcaatgacacttttgat
accttcgcattagatttttccagagagaagaaattactagaatgtctggattaccttaca
gctcccaactctccaacaattagagaagagctctgtacagcctcgtacgacaccatcact
gtgcactggacctctgatgatgaatttagtgtggtttcatatgagcttcagtatactatc
tttactggacaagctaatgttgttagtttgtgtaactccgccgacagctggatgattgtg
cccaacatcaagcaaaatcactacacagttcacgggctccagagcggcaccaagtacatc
ttcattgtcaaagctataaatcaggctggcagtcgtaacagtgagcccggcaagctgaag
acaaacagtcagccatttaaattggaccccaaatctgcccatcgaaaactaaaggtttcc
catgacaacttgacagtggaacgtgatgaaacgtcatctaaaaaaagtcacacacctgag
cgcttcactagccaaggaagctatggcgtagcaggcaatgtgttcattgatagtgggcgc
cattattgggaagtagtcataagtggaagtacatggtatgcaattggtcttgcttacaag
tcagccccaaaacacgagtggattggaaagaattctgcttcttgggtgctctgccgctgc
aataataattgggtggtgagacataatagcaaggaaatccccatcgaaccagcaccccac
ctccggcgtgtgggcattttgctagactatgataatggctccatcgccttttatgatgct
ttgaactcccttcatctttatacatttgacattacatttgcacagccggtatgtcctacc
ttcactgtgtggaataaatgtttgacaattataacaggccttcccattccagaccacttg
gactgccttgagcagctggcctga
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