KEGG   Antechinus flavipes (yellow-footed antechinus): 127554284
Entry
127554284         CDS       T08818                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03020  RNA polymerase
afz03420  Nucleotide excision repair
afz05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127554284
  09124 Replication and repair
   03420 Nucleotide excision repair
    127554284
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    127554284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afz03021]
    127554284
   03400 DNA repair and recombination proteins [BR:afz03400]
    127554284
Transcription machinery [BR:afz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127554284
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127554284
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom BIG2_C
Other DBs
NCBI-GeneID: 127554284
NCBI-ProteinID: XP_051841638
LinkDB
Position
3:339265203..339274303
AA seq 142 aa
MATGGSDPRAGDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcgaccggaggcagcgaccctcgcgctggcgatgtggaagaagacgcctcgcagctc
gtcttccccaaagaatttgaaacagcagaaactcttctaaattccgaagtccacatgctt
ctagagcatcgaaaacaacagaatgaaagtgcagaagatgaacaagaactttctgaggtt
ttcatgaaaactttaaattacacagcacgctttagtcgttttaaaaacagggaaaccatt
gctagtgttcggagtttgttactccagaaaaagctccataagtttgagttggcgtgttta
gcaaatctttgtcctgagacagcagaagaggctaaggctctgattccaagcctggagggt
cgcttcgaagatgaggaattgcaacagattcttgatgatatccagaccaaaaggagcttc
cagtattag

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