KEGG   Antechinus flavipes (yellow-footed antechinus): 127554438
Entry
127554438         CDS       T08818                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127554438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afz03041]
    127554438
   03036 Chromosome and associated proteins [BR:afz03036]
    127554438
Spliceosome [BR:afz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127554438
 Complex B
    127554438
 Complex C
   U2 SnRNP specific factors
    127554438
Chromosome and associated proteins [BR:afz03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127554438
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF2298 TALPID3
Other DBs
NCBI-GeneID: 127554438
NCBI-ProteinID: XP_051841910
LinkDB
Position
3:386191618..386241228
AA seq 1157 aa
MNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGASSQPPSKRKRRWDQTADQT
PGATPKKLSNWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAAT
PGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETP
TPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWR
WEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQ
TEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNG
TPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLV
EIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFL
KAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIK
TEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKM
VMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKP
YLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
EYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVI
QAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRI
YNDEKNTYIRYELDYIL
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgaatgctaggacctatatggatgttatgcgagaacaacatttgactaaagaagagagg
gaaattaggcaacagctagcagaaaaagctaaagctggagaacttaaagttgtcaatggt
gcatcatcccagcctccttcaaaacgcaagaggcgttgggatcaaacagctgatcagact
cctggtgcaactccaaaaaagctttcaaactgggatcaagctgagactcctgggcataca
ccttccttgagatgggatgaaacacctggtcgcgcaaagggtagtgagacacctggagca
acacctggctcaaaaatatgggatcctactcctagccatactccagcaggagctgctact
cctggacgtggtgatacccctggtcatgcaacaccaggccatggaggtgcaacctcaagt
gcacgtaaaaacagatgggatgagactcctaaaactgaaagagatactcctggtcatgga
agtggatgggctgagactcctcgtacagatcgtggtggagattcaattggtgaaacacca
actcctggagcaagcaaaagaaagtcacgttgggatgaaacaccagctagtcaaatgggt
gggagcactcctgttctgactcctggtaaaacaccaataggcacacctgctatgaacatg
gcaacacctactccaggtcacataatgagcatgaccccggaacagcttcaagcatggaga
tgggagagagaaattgatgagagaaatcgtccactttctgatgaagagctggatgctatg
ttcccagaaggatataaggtactccctcctccggctggctatgttcctattcgtactcca
gcccggaagctgacagcaactcctacacctttaggtggcatgactggattccacatgcaa
actgaagataggactatgaaaagtgtgaatgaccaaccatctggaaatcttccattttta
aaacctgatgatattcaatactttgataaattattggtggatgtagatgaatcaacactt
agtccagaagaacaaaaagagagaaaaataatgaaattgcttttaaaaatcaagaatggc
acacctccaatgagaaaggctgcattgcgtcagatcactgacaaagctcgtgaatttgga
gctgggcctttgtttaatcaaattcttccattgctgatgtctccaacacttgaagatcag
gaacgtcatttacttgtaaaagttattgacagaattttgtacaagctagatgaccttgtt
cgaccatatgtacataagatccttgtggttattgaaccactactgattgatgaagattac
tatgccagagtggaaggcagggagatcatttcaaatttggctaaggctgctggcctggca
accatgatttctactatgcgacctgatattgataacatggatgaatatgtccgtaataca
acagctcgagcttttgctgttgttgcatctgccttgggcattccttcattgttgcccttt
ttgaaagctgtgtgtaagagcaagaagtcctggcaggctaggcatactggtattaagatt
gtacagcaaattgctattcttatgggttgtgccatccttcctcatctcagaagtttagtt
gaaatcattgaacatggtcttgtggatgaacaacagaaagtccggaccattagtgctttg
gctattgctgctctggctgaagcagctactccttatggcattgaatcttttgattctgtt
ttaaagcctttgtggaaaggtatccgccagcatagaggaaagggcttggctgccttcttg
aaagctattggataccttattcccctcatggatgcagaatatgcaaattactatactaga
gaagtgatgttaatccttatcagagaattccaatctcctgatgaagaaatgaaaaaaatt
gtattgaaggtggtaaagcagtgctgtgggacagatggtgtagaagcaaattacatcaaa
acagagattcttcctccttttttcaaacatttttggcaacacagaatggccttggacaga
agaaattatagacaattagtggatactacagtagagttggcaaacaaagttggtgcagca
gaaattatttcccggattgtggatgatctaaaagatgaagctgaacagtacaggaaaatg
gttatggaaactattgagaaaataatgggaaacttgggtgcagcagatattgaccacaaa
cttgaagaacaacttattgatggcatcctgtatgcctttcaggaacagaccacagaggac
tcagtgatgttgaatggttttggcacagtagtcaatgcccttggcaagagagtcaaacca
tacttgcctcagatctgtggtacagttttgtggcgtttgaacaacaaatcagccaaagtc
agacaacaggctgctgacctcatctctcgtactgctgttgttatgaaaacttgtcaggag
gaaaaattgatgggacatttgggtgttgtcctgtatgagtacttgggtgaagagtaccct
gaagtattgggaagcatccttggagcactgaaggccattgtgaatgtaataggtatgcac
aagatgactccaccaattaaagatttattgccacggcttacaccaatcttaaagaataga
catgagaaagtacaagaaaactgtattgatcttgttgggcgtattgctgacaggggagca
gaatatgtctctgcaagagaatggatgaggatctgctttgaacttttagaattgttaaaa
gctcacaaaaaagctatccggagagccacagtcaatacatttggttatattgcaaaagcc
atcggaccccatgatgtattggctacactgctaaacaacctcaaagttcaagaaagacaa
aaccgagtatgtacaacagtggccatagctattgtagcagagacatgctcaccattcaca
gtcctgcctgcactgatgaatgaatatcgagttcctgaactgaacgtgcagaatggtgtt
ttaaaatcactttctttcttgtttgaatacattggagaaatgggaaaagactatatttat
gctgtaacaccattacttgaagatgctttgatggacagagatcttgtacacagacagact
gccagtgcagtggtgcaacacatgtctcttggggtttatggatttggttgtgaagattct
cttaatcatttgttgaattatgtatggcctaatgtgtttgagacatctccccatgttatt
caagcagttatgggagccctagaaggcctaagagttgctattggaccatgtagaatgttg
caatactgtttgcagggtttgtttcacccagccagaaaagtcagagatgtgtactggaag
atttacaattctatctacattggttcacaggatgcactcatagcacattatccaagaatc
tacaatgatgaaaaaaacacctatattcgttatgaacttgactatatcttataa

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