Antechinus flavipes (yellow-footed antechinus): 127554653
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Entry
127554653 CDS
T08818
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127554653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127554653
Spliceosome [BR:
afz03041
]
Complex A
U1 snRNP components
U1 related factors
127554653
Complex B
127554653
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
127554653
NCBI-ProteinID:
XP_051842334
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All DBs
Position
3:443175327..443228210
Genome browser
AA seq
1042 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVQAARSDWTAGKPVSLLAPLIPPRSSGQPLPFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGVERGGLMVSEMENRPPPRGPGNGERRLSSSSLCSS
PWASADGYLRRRPSMGHPGMHYPPMGMHPMGQRGNMQPVPHGMMQQMMPPMGGPPMGQMP
GMMSSVMPGMMMTHMSQASIQPALPPGVNNMDVAVGATSGTQKSMWTEHKSPDGRTYYYN
TETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEG
YQNTIVAGSLITKSNLHAMIKAEESSKEESTTTSTAPVPTTEITTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASANAAISTPSSIVASSAPIVTEPEVTSIVATVIDNDNTVTISTEE
QAQLVTPIVHEQSAEVSSNVPEEASKQETSVDYTPKKEEEDSQPAKKTYTWNTKEEAKQA
FKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSK
YKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKE
KEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALI
CFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPT
ISSDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFLVEVNTT
FEDFVAVISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLK
QAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHS
KKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASERSSSAESERSYKKSKKHKKK
SKKRRHKSDSPDSDTEREKDKKEKERENEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGS
ELSEGELEKRRRTLLEQLDDDQ
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagcgaggccgaggccgggggcgaatcgccgcagagctgcgtgcaa
gctgcgcgctctgattggacggcggggaagccagtcagcttattggccccgctgatcccg
ccccgcagctccgggcagcctctaccctttggccccagcgggcgccagccactcagatcg
ctccttgttggaatgtgtagcggcagcggccgccgccggagcagcctcagcccgacgatg
aggccggggacgggagtcgagcgtggaggcctcatggtgagtgaaatggagaaccgtcct
ccaccgcggggtcccgggaacggggagcggagactgtccagttcaagcctctgctccagc
ccatgggcctctgcggacggctacctgaggagacggccctcgatgggacatcctggtatg
cattatccacccatgggaatgcaccctatgggtcagagaggaaacatgcaacctgtacct
catggaatgatgcagcaaatgatgccccctatgggaggtcctccaatgggacaaatgcct
ggaatgatgtcttcagtcatgcctgggatgatgatgactcatatgtctcaggctagcata
cagcctgctttaccgccaggagtaaacaatatggatgtagcagtaggtgcaacatctggc
acacaaaaatcaatgtggactgaacataaatctcctgatggaagaacttattattataat
acagaaacaaagcagtctacctgggaaaaacctgatgatctcaaaacacctgctgagcaa
ttattatctaaatgcccctggaaggagtacaaatctgactctggaaagccttattattat
aattctcaaacaaaggaatctcgttgggccaaacctaaggaactcgaggatcttgaagga
taccagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgctatgatc
aaagcagaagaaagcagtaaagaagaatcaaccacaacatctactgccccagttcctaca
acagagattacaactacaatgagcactatggctgcagctgaagctgcagcagctgttgtt
gctgcagccgctgctgcagctgctgcagccgctgcagccaatgccagtgctaatgctgcc
atatcaactccttcttccattgttgcttcaagtgcaccaattgtcactgagcctgaagtt
acttccattgttgctactgtcatagataatgacaatacagtaacaatttcaactgaggaa
caagcacaacttgttacacctattgttcatgaacaaagtgcagaagtatctagtaatgta
ccagaggaagcatcaaagcaagagacttcagttgattatactcccaaaaaggaggaagaa
gatagtcagcctgctaaaaaaacatatacttggaatacaaaagaagaagcaaagcaagca
tttaaagaattactaaaagaaaagcgagtaccatctaatgcttcatgggaacaagcaatg
aagatgattattaatgatccccgatacagtgccctggcaaagcttagtgaaaaaaagcaa
gcctttaatgcatataaagtacagacagagaaagaagaaaaagaagaagcaagatcaaaa
tataaagaagctaaagaatccttccagcggtttcttgagaaccatgaaaaaatgacttct
acgaccagatataaaaaagctgaacaaatgtttggagagatggaagtatggaatgcaata
tctgagcgagatcgtcttgaaatttatgaagatgtcttattctttctttcaaaaaaagaa
aaggaacaagcaaaacagttgcgaaagagaaattgggaggccttaaaaaatatacttgac
aacatggctaatgttacctactccactacttggtctgaagcccagcaatatttgatggat
aaccctacttttgcagaagatgaggaacttcagaacatggataaagaagatgcattgata
tgctttgaagaacatatccgggctttagaaaaagaagaggaagaagaaaaacaaaagagt
ttgttacgagaaaggaggcggcaacgtaaaaatagagaatcttttcagatatttttagat
gagttgcatgaacacggacagttgcattctatgtcatcttggatggaattatatccaaca
attagttctgatattagatttaccaacatgcttggtcagcctgttttttcattaggatca
acagcacttgatcttttcaagttttatgttgaggatctaaaagcacgttatcatgatgaa
aagaagataataaaagacatcctaaaggataaaggatttctggttgaagtaaatactact
tttgaagattttgttgcagtaatcagttcaactaaaagatcaacaacattagatgctggg
aacatcaaattggcttttaatagtttgttagaaaaagcagaagcccgtgaacgggaaaga
gaaaaggaggaggctcgtaagatgaaacgaaaagagtctgcattcaagagtatgttgaaa
caggctgcccctccaatagaattggatgcagtctgggaagatattcgagaaagatttgta
aaggaacctgcatttgaagacattactctagagtctgaaagaaaaagaatatttaaggat
ttcatgcatgtgcttgagcacgaatgtcaacatcatcattcaaagaacaagaaacattca
aaaaaatctaaaaaacatcacaggaaacgttcacgttctcgatcgggctcagattcagat
gatgatgatagccattcaaagaaaaagaggcaacggtcagaatcccgctctgcttcagaa
cgttcttctagtgcggagtctgagagaagttacaagaaatcaaaaaagcataagaagaaa
agtaagaagagaagacacaaatctgattctccagattctgatactgaacgagaaaaggat
aaaaaagaaaaagaacgagaaaatgaaaaggatagaactaggcagagatcagaatcaaaa
cacaaatcccctaaaaagaagactggaaaggattctggtaattgggatacttctggcagt
gaactgagtgaaggggaattagaaaagcggagaaggaccctcttggaacaactggatgat
gatcaataa
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