Antechinus flavipes (yellow-footed antechinus): 127554673
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Entry
127554673 CDS
T08818
Name
(RefSeq) neurobeachin
KO
K24183
neurobeachin
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127554673
Membrane trafficking [BR:
afz04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
127554673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Beta-prop_IFT122_1st
Laminin_G_3
Neurobeachin
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
DUF4800
Beta-prop_WDR90_POC16_2nd
PIGA
Motif
Other DBs
NCBI-GeneID:
127554673
NCBI-ProteinID:
XP_051842430
LinkDB
All DBs
Position
3:complement(447795222..448549352)
Genome browser
AA seq
2970 aa
AA seq
DB search
MASEKPGPGPGPGPEPQPAGLIAVGAGAGGGPGGGSCGGGGGGAVSGLGELRGASGSGSM
VLPTGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQD
AESITCMSELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQVLLKMSTVDDMI
ADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQMPQRHGPDTFFN
FPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGVGYSAH
FVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYG
DMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNPAQIFAIHQLGPGYKS
TFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPKENASIFVHSPH
ALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDSQMETTVCATLLAFLVEL
LKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHGAPLLKQL
CDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIRRVGTVLQLMHTLKYYYWVI
NPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMH
EDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKLLASKSESIWVQALKVLGYFLK
HLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPHAEPD
STVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQD
WMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAH
KEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSSQATGAKGGMEIREIEDLSQSQSPES
ETDYPVSTDTRDLLMATKVSDDVLGNSDRSGGGVHVEVHDLLVDIKAEKVEATEVKLDDM
DLSPETLVTGENGALVEVESLLDNVYSAAVEKLQNNVHGSVGIIKKSEEKDNGPLITLAD
EKDEPTSNNNSFIFDKIPSQEEKLLPELSSNHIIPNVQETQVHLSVSDDLGLLAHMTNSV
DLTCTSSIIEEKEFKIHTTSDRMSSMSERELTSSSKGLEYAEMTATALETESSGNKIVPN
IDGGSIISDTERSDDGKEVGKEIRKIQTTTTTQAVQGRSITQQDRDLRVDLGFRGMPMTE
EQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNE
NIIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPTTELENIEVTQGMSAETAVTFLSR
LMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLECRQRQRERVNKS
SLISSKPQEAPQNVTIAATSKTPLESVPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDS
KQAQFLALAVVYFISVLMVSKYRDILEPQRETARSGSQAGRNMRQEINSPTSTVVVIPSI
PHPSLNHGFLAKLIPEQSFAHSFYKETPATFQDNMKEKDTPTPGEEIQLESSIPHTDSGI
GEEQIPSILNGAELETSAGPDAMSELLSTLSSEVKKSQESLTESPNEMLKPAPSISSISQ
TKGINVKEILKSLVAAPVEIPECGPDPIPYPDPALKRETHAILPMQFHSFDRSVVVPVKK
APPGSLAVTTVGAATSGSGLPAGSTPNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFV
NGATSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGS
HGQELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDH
IVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTAN
QLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKA
AAEYGTEEDILKSKKAFRSQAVVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTP
AQLIAPVVVAKGTLSITTTEIYFEVEEDDPAFKKIDPKVLAYTEGLHGKWMFSEIRAVFS
RRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPR
QLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLP
GNFRDLSKPVGALNPKRAVFYAERYETWEDDQSPPCHYSTHYSTAPSTLSWLLRIEPFTT
FFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVRE
DEIVVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNV
FHYLTYEGSVNLDSITDPILREIPEAFFIRDPHTFLLTKDFIKAMEAQIQNFGQTPSQLL
IEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVV
TVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSI
QINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGD
CYIVSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVI
SGAKEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLL
AQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQ
RTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8913 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagaagcccgggccggggcccgggccggggccggagcctcaacctgcgggg
ctcatcgccgtcggggccggagccggaggtggccctggaggtggcagctgcggtggcggt
ggcggcggcgcggttagtggtttgggggagctgagaggggcgtccggctccggctcaatg
gtgctcccaacggggatgattaacccatcggttccaatccgcaacatccggatgaaattt
gctgtgttgattggactcatacaagtcggggaggtcagcaaccgggacatcgtggagacg
gtgctcaacctgcttgttggtggggaattcgatttggagatgaactttataatccaggat
gctgagagtataacatgcatgtcagaacttttggagcattgtgatgtaacatgccaagca
gaaatttggagtatgtttactgccattctacgaaaaagtgtccgtaatttgcagaccagc
acagaagttggcttaattgagcaagtattgctgaaaatgagtactgtagatgacatgatt
gcagatctcctagttgatatgttgggggttcttgcaagctacagcatcactgtcaaggag
ttgaagcttttgttcagcatgcttcgaggagaaagtggaatctggccaagacatgcggtt
aaattgctgtcagtccttaatcagatgccacagagacatgggcctgatacttttttcaat
ttcccaggctgtagtgcagcagcaattgcattgcctcctatagcaaagtggccttaccaa
aatgggtttacactcaatacttggtttcgtatggatccattaaataacatcaatgttgat
aaggataaaccttatctctattgttttcgtactagcaaaggtgttggttattctgctcat
tttgttggcaactgtttaatagttacttcactgaagtcaaagggcaaaggttttcagcac
tgtgtgaaatatgattttcaaccacgaaaatggtacatgatcagcattgttcacatctac
aaccgctggagaaatagtgaaatacgatgttatgttaatggtcagctggtttcatatggt
gatatggcctggcatgttaacacaaatgatagctatgataagtgctttcttggatcttca
gaaactgctgatgcaaatagagtattctgtggtcaacttggtgcagtttatgtgttcagt
gaagcactcaacccagcacagatatttgcaattcatcaattaggacctggatataagagc
actttcaaatttaaatctgagagtgatattcaccttgctgaacatcataaacaggttcta
tatgatgggaaacttgcaagtagtattgcttttacatataatgctaaggctactgatgct
cagctatgtctagaatcatcacccaaagaaaatgcatctatttttgtacactctcctcat
gctctcatgctccaggatgtgaaagctatagtaacacactcaattcatagtgcaattcat
tcaattggaggtattcaagtactttttcctctttttgcacaactggacaaccgccagctc
aatgatagtcaaatggaaacaacagtttgtgcgactcttttggcattcctcgttgaattg
ctgaagagttcagtggccatgcaagaacagatgctgggtggaaaaggctttctagtcatt
ggttacctccttgagaagtcatccagggttcacataaccagagcagttctggaacagttt
ttatcttttgcaaagtatctcgatggtttatctcatggagcaccattactgaagcagctt
tgtgatcacatacttttcaacccagctatctggattcatactcctgcaaaggttcaactt
tctttgtatacttatttatctgctgaattcattggaactgctaccatctacactaccata
cgcagagttggaacagtattacaactaatgcacacattgaaatattactattgggttatt
aatcctgctgatagcagtggcattactcctaaaggattagatgggccacgaccctcacaa
aaagaaattatatcattacgagcatttatgctgctttttttgaagcagcttatattaaag
gatcgaggggtcaaggaagatgaacttcagagtatattaaattatttattaacaatgcat
gaggatgaaaacatacatgatgttttgcagttattagtggctttgatgtcagaacaccca
gcctcaatgatacccgcctttgaccaaagaaatggaatacgagtgatctacaaattattg
gcttccaaaagtgaaagtatttgggttcaggctctgaaggttttgggatactttctcaag
cacttgggtcacaagagaaaagttgaaattatgcacacccacagtctttttactcttctt
ggagagaggttgatgctgcatacaaatactgtgactgttactacatacaacacactttat
gagattttgactgagcaggtgtgtactcaagttgtacataagccacatgcagagccagat
tctacagtgaaaattcagaatccaatgattcttaaagttgtggcaaccttgttaaaaaac
tcaacaccaagtgcagaactaatggaagtccgccgtttatttttatctgacatgataaaa
cttttcagcaatagccgtgaaaacaggagatgtttacttcagtgttcagtgtggcaggac
tggatgttttctcttggctatattaatcccaaaaattctgaagaacagaagattacagaa
atggtgtacaatatttttcggattcttttgtatcatgcaataaaatatgaatggggcggc
tggagagtatgggtggatacactttcaatagctcattcaaaggtcacctatgaagctcac
aaggaatatttagccaaaatgtatgaagagtatcaaagacaagaggaggaaaacattaaa
aagggaaagaaagggaatgtgagcactatatcaggtctttcatctcaggcaactggggca
aaaggtggaatggaaatcagagaaatagaagatctttcacaaagtcaaagcccagaaagt
gaaactgattaccctgttagcacagataccagggacttgcttatggcaacaaaagtatca
gatgatgttctgggaaattcagatagatcaggaggtggtgtgcatgtggaggtacatgat
cttttagtagatataaaagcagagaaagtggaagcaacagaagtaaagcttgatgatatg
gatttgtcacctgagactttagttactggagaaaatggtgcacttgttgaagttgaatct
ttgttggataatgtatatagtgctgctgttgagaaacttcaaaacaatgtccatggaagt
gttggcatcattaaaaagagtgaagaaaaggataatgggccattgataacattggctgat
gagaaagatgaacccaccagtaataataactcatttatttttgacaaaattccaagccaa
gaagagaaacttcttcctgaactctctagtaatcacattattccaaatgtgcaggaaact
caagtacatcttagtgttagtgatgatcttggactacttgctcatatgactaatagtgtt
gacttaacttgtacatcaagcataatagaagaaaaagaattcaaaattcatacaacttca
gatagaatgagtagcatgtctgaaagagaattaacttcatcctctaaaggtttagaatat
gctgagatgacagccacagcacttgaaacagagtcttctggtaataaaattgtgcctaat
attgatggaggaagcataatttcagatactgaaagatctgacgatggtaaagaagtagga
aaggaaatcaggaagatccagactactactacaactcaagcagttcaaggacggtctatc
actcaacaagacagagatctcagagttgacttaggatttcgaggaatgccaatgactgag
gaacagcgacgtcaatttagtccaggtccacgcacaactatgtttcgtattcctgagttt
aaatggtctccaatgcaccagaggcttctcacagacttgctatttgctttagaaacagat
gtacatgtttggagaagccattctacaaagtctgtaatggattttgtcaatagcaacgaa
aatattatttttgtacacaacacaattcacctcatttctcagatggtagacaacatcatc
attgcttgtggaggaattttacctttgctctctgctgctacatctccaactacggaattg
gaaaatattgaagtgacacaaggcatgtcagctgagacagcagtgactttcctcagccga
ctgatggctatggttgatgttctggtgtttgccagctctctaaattttagtgagattgaa
gctgaaaaaaacatgtcttctggaggtttaatgcgacagtgtctgaggcttgtttgctgt
gttgctgtgagaaactgcttagaatgtcgacaaaggcaaagagaaagggtcaacaaatct
tcccttatcagcagtaaacctcaagaagctccccaaaatgtgaccatagctgcaacttca
aagactccacttgaaagtgttcctggtaatctttctcccatcaaagatcctgatagacta
cttcaggatgtagatattaatcgtctgcgtgccgttgtatttcgtgatgtggatgatagc
aaacaagctcaatttttagctttggctgttgtttacttcatttctgttcttatggtctcc
aaatatcgtgacatactagaaccccagcgggagactgcacgatctggaagccaggcaggt
agaaacatgaggcaagaaattaattcgccaacaagcacagttgtggtcataccatctatc
cctcatccaagtttgaaccatggattccttgccaagttaattcctgagcagagctttgcc
cactcattttacaaagaaactccagctacatttcaggataacatgaaagaaaaagacaca
ccaacccctggtgaagagattcagctggaaagttcaattcctcatacagattcaggaatt
ggagaggaacagatacctagcatcttgaatggagcagaactagagactagtgcaggtcct
gatgccatgagtgaattattatctactttgtcttctgaggtgaaaaaatcacaagaaagc
ttaactgagagtcctaatgaaatgctcaagcctgcaccatccatatctagcatcagccaa
accaaaggcattaatgtcaaggaaatactaaaaagccttgtagctgcccctgttgaaatt
ccagaatgtggtcctgaccctatcccttacccagatcctgcattgaagagggaaacccat
gctattcttcctatgcagtttcattcctttgacaggagtgttgtggtacctgtgaagaag
gctcctcctggtagtcttgctgtgaccactgtaggggctgccacttctggaagtgggctg
cctgcaggcagtacacctaatatatttgctgctactggagctacaccaaaaagtatgatt
aatacaacaggtgcagtggattcagggtcatcttcatcctcctcctcctctagttttgtg
aatggtgctaccagtaaaaaccttccagctgtacaaactgtagctccaatgcctgaggat
tccgctgaaaatatgagcataactgcaaaacttgaaagagctttagaaaaagttgccccg
cttcttcgtgaaatatttgtagattttgctccattcctctctcgtacgctacttggtagt
catggacaagaactgttgatcgaaggccttgtgtgtatgaaatcaagcacatctgtggtt
gagcttgttatgttgctttgttcccaggagtggcaaaattcgattcagaagaatgcagga
cttgcatttattgaactcatcaatgaaggaagattgttatgtcatgctatgaaagatcat
atagtgcgtgttgccaatgaagcagagtttattttgaatcgacagagggctgaggatgtg
cacaaacatgcagaatttgagtcacaatgtgcccaatatgctgctgaccgaagagaagaa
gaaaagatgtgtgaccatctaatcagtgctgctaagcatcgggatcatgtcacggccaat
cagctgaagcaaaagattcttaatattctcacaaacaaacatggggcttggggagctgta
tctcatagccaactgcatgatttctggcgcttagattattgggaagatgatctgcgtaga
cggagaagatttgttcgcaatgcttttggttccacgcatgctgaagccttgctcaaagct
gctgcagaatatggcactgaagaagatatactcaagtcaaagaaagcattcagaagtcaa
gctgtggtgaaccagaatgcagaaacagagctcatgctagaaggagatgatgatgcagtc
agtttactacaggaaaaagaaattgacaaccttgcaggccccgtggtcctcagtacacca
gctcagctcatagcccctgtggtggtggccaaggggacactctccatcactacgacggaa
atttactttgaggtagaggaagacgatcctgccttcaagaagatcgaccccaaagttctt
gcatacacagagggacttcatggaaaatggatgttcagcgaaattcgagctgtattttca
agacgttatcttctacagaacactgctctggaagtgtttatggcaaacagaacctcggta
atgtttaactttcctgaccaagcaacagtaaaaaaagttgtgtacagcttgcctcgggtt
ggtgtaggaactagttatggtttgccacaagccaggagaatatccttggccacccctcga
cagctttataaatcttccaatatgacacaacgttggcaaaggcgagagatctctaatttt
gaatatttaatgttcctcaataccatagcaggacgaacatacaacgatctgaaccaatat
ccagtatttccatgggtattaacaaactatgagtcagaagaattagacttgacacttcca
ggaaacttcagagatctttcaaagccagttggtgctttgaaccctaaaagagcagttttt
tatgcagagcgctatgagacttgggaagatgatcagagcccaccctgccactatagcaca
cactattcaacagcaccatctacgttatcctggctacttcgaattgaacctttcacaaca
ttttttcttaatgcaaatgatgggaaatttgaccatccagatcgaaccttctcatcagtt
gcaagatcttggagaacaagccaaagagatacatcagatgtaaaggaattaattccagag
ttttactacctacctgagatgtttgtcaacagtaatggatataatttgggagtcagagaa
gatgaaattgttgtcaatgatgttgaccttcccccatgggcaaagaaacctgaagacttt
gtacgaatcaatagaatggccttagaaagtgaatttgtctcctgccaactccatcagtgg
attgatcttatttttggctacaaacaaagaggaccagaagcagtccgtgccctgaatgtt
tttcactacctaacatatgaaggctctgtgaacctggatagtatcactgatccaatactc
agggagattccagaggctttttttattagagatcctcatacttttcttcttacaaaggat
tttattaaggccatggaggcacagatacagaactttggacagacgccatctcagttgctt
attgagccacatccacctcggagttctgccatgcacctgtgtttccttccacagagtcca
ctcatgtttaaagatcagatgcaacaggatgttataatggtgctgaaatttccatcaaat
tctccagtcacacatgtggcagccaacactcttccacaccttaccattcctgcagtggta
actgtgacttgcagcagactttttgcagtaaatagatggcacaacacagtaggcctcagg
ggagccccaggatattccttggatcaagcccatcatcttcccattgaaatggatccttta
attgcaaataattctggtgtgaataaacgacagatcacagaccttgtggatcagagtata
cagatcaatgcacattgttttgttgtcacagcagataatcgctacattcttatttgtgga
ttctgggataagagttttagagtttattctacagaaacagggaaattaactcagattgta
tttggccattgggatgtagtcacttgtctggccagatctgaatcctacataggaggagat
tgttatattgtgtctggatctcgagatgctactctcctgctctggtactggagcggaaga
catcatatcataggagataaccccaatagcagtgattatcctgctccacgggctgtcctc
acagggcatgaccatgaagttgtctgtgtatcagtctgtgcagaactgggactagttatc
agtggtgctaaagaaggcccttgccttgtccacacaatcacaggagatttgctgagagca
ctggagggaccagaaaactgcttattccctagattgatttccgtgtccagtgaaggccac
tgtatcatatactatgaacgaggacggttcagtaatttcagcattaatggaaaactttta
gctcaaatggagatcaatgattcaaccagggccatcctcctgagcagcgatggacaaaat
cttgtcactggaggagacaatggagttgtagaagtatggcaggcttgtgactttaaacag
ctttatatttatcctggctgtgatgctggcataagggcaatggatttgtcccatgatcaa
aggacactgataaccggcatggcttctggtagcattgtagcttttaatatagattttaat
cgatggcattatgagcatcaaaacagatactga
DBGET
integrated database retrieval system
