Antechinus flavipes (yellow-footed antechinus): 127554682
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Entry
127554682 CDS
T08818
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127554682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127554682
03400 DNA repair and recombination proteins [BR:
afz03400
]
127554682
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
127554682
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
127554682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
INTS7_N
Motif
Other DBs
NCBI-GeneID:
127554682
NCBI-ProteinID:
XP_051842439
LinkDB
All DBs
Position
3:complement(451392326..451611601)
Genome browser
AA seq
1304 aa
AA seq
DB search
MFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINN
GHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQ
AIEPYITNFFNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNE
ERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDL
AKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKE
AMMGLAQIYKKYSLQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHN
LETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASGKAIFS
KVMIITRNLPDPGKAQDFMKKFTQVLEDDEKIRNQLEMLVSPTCSCKQAEGCVREITKKL
GNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIR
AGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIR
SALLPVLHHKAKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPL
VSIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQ
AIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIV
KLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCA
KDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVK
VQDIEQLKDVKECLWFILEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYT
VCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKT
ANVLGAVNKPLSSAGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDF
SMSSPMPGKKSDKRDDSDLSELEKPRSRKKTPVTDPEEKLGMDDLTKLVQEQKPKGSQRG
RKRGTAMSDSDEQQWPEEKRLKEDSLENEDEQNSPPKKGRRGRPPKAVGSGTPKEEPAIK
TSKRGGRKKPGPPAAEEEEEEERQSENMEQKQKGRQHRTSRRAQQSRTGRSKQASSKENE
SSEEMDVFQSSSPVNDDIPQEEIMEEEEVSTITVRRRTSKRERR
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgtttataacaagacaattgaaaggattagaagatacaaaaagtccgcagttcaataga
tatttttatttacttgagaacattgcttgggtcaagtcctataacatatgctttgaatta
gaagatagcaatgaaattttcacgcagctttataggactttattttcagtcataaacaat
ggccacaatcaaaaagttcatatgcacatggtggatctgatgagctctattatttgtgag
ggagatactgtttctcaggagcttttggatacagttctagtaaatctggtgcctgcccac
aagaatttaaacaaacaagcatatgacctggccaaggctctactgaagagaacagctcaa
gctattgaaccgtatattactaatttttttaatcaggttcttatgcttggaaaaacatct
atcagtgatctatcagagcacgtttttgacttaatattggaactctacaatatcgacagt
catttgttactatctgttttaccacagcttgaatttaaactgaagagcaatgacaatgaa
gaacggctgcaagttgttaaactgctagcaaaaatgtttggggcaaaggattcagaattg
gcatctcaaaataaaccactttggcagtgctatttgggaaggtttaatgatattcatgta
cctatacggcttgaatgtgtgaaatttgccagccattgccttatgaaccatcctgatttg
gcaaaggatttaacagaatatcttaaagtaagatcacatgatcctgaagaagccattaga
catgatgttattgtttctatagttacagcagctaaaaaagatattctgcttgttaacgat
cacttacttaattttgtgcgagaacgaacattagacaaacggtggcgagtcagaaaagaa
gccatgatgggacttgcccaaatttacaagaaatattcgttgcagtcagaagctggaaag
gaagctgcaaaacaaatttcatggatcaaggacaaattgctacatatatattatcaaaac
agtattgatgaccggttgcttgttgaacgcatctttgctcaatacatggttcctcacaat
ttggaaactacagaacgaatgaaatgcttatattacctgtatgctacattggatttaaat
gctgtgaaagccttgaatgaaatgtggaaatgtcagaaccttctccggcatcaagtaaag
gatttgctagatttaattaaacagcccaaaacagatgccagtggtaaagccatattttca
aaagtgatgataattacaagaaatttgcctgatcctggtaaggctcaggattttatgaaa
aaattcacacaagtgttagaagatgatgagaaaataagaaaccagttagaaatgcttgtt
agtccaacatgttcctgtaagcaggctgaaggatgtgtgcgtgaaataaccaagaagttg
ggcaaccccaaacaacctacaaatccttttctggaaatgattaaattcctcctggagagg
atagctccggtgcatatagatactgaatctataagtgctcttattaagcaagtgaacaag
tcaatagatggaacagcagatgatgaagatgagggtgttccaactgatcaagcaatcagg
gcaggccttgaattgcttaaggtactctcatttacacatcctatctcatttcattcggcg
gaaacttttgaatctcttctggcttgcctaaaaatggatgatgaaaaagtagcagaagct
gcattacaaattttcaaaaatacaggaagcaaaattgaagaagacttcccacatatcaga
tcggcattgcttccagttctacatcacaaagctaaaaaaggacctccacgtcaagccaaa
tatgctattcactgtatccacgcaatattttccagtaaagagacacagtttgcacagata
tttgagccactgcataaaagcctagacccaagcaaccttgaacatctcataacaccattg
gtttctattggtcacatagctcttcttgcaccagatcaatttgctgctcctttgaaatct
ttggtagctactttcatcgtaaaagatcttcttatgaatgaccggcttccagggaaaaag
acaaccaagctgtgggttcctgatgaagaagtttctcctgagacactagttaaaattcaa
gccattaaaatgatggtgcgatggctattaggaatgaaaaacaatcacagcaaatcagga
acttctacactgagattattaacaacaatattgcatagcgatggagacttaacagaacag
ggcaaaattagtaaaccagatatgtcgcgtctgagactggctgctggaagtgcgatcgtg
aagttggcccaagaaccctgctatcatgaaatcatcacattagaacaatatcagttatgt
gctttagctatcaatgatgaatgctaccaagtaagacaagtgtttgctcagaaacttcac
aagggcctttccagattacggttaccacttgaatacatggcaatctgtgcattgtgtgcc
aaagacccagtgaaagagagaagagcacatgccaggcagtgtctggtgaaaaatataaat
gtgagacgagaatatctgaagcaacatgcagcagttagtgaaaaattattatcactctta
ccagaatatgttgttccttatactattcatcttttggcacatgatccagattacgtgaaa
gtccaggacattgaacaacttaaagatgtgaaagaatgtctctggttcatacttgaaatc
ttaatggctaaaaatgaaaataacagtcatgcctttatccgaaagatggtagaaaatatt
aaacaaacaaaagatgcccaaggaccagatgatgccaaaatgaatgaaaaactgtacaca
gtgtgtgatgtagcaatgaatatcatcatgtcgaagagtaccacatatagtttggagtct
ccaaaagacccagtacttccagcacgatttttcactcaacctgacaagaactttagtaac
accaaaaattatctgcctccagaaatgaaatccttcttcactccgggaaagcctaaaaca
gccaatgttcttggagctgttaataagcctctttcatcagcaggcaagcagtctcagtct
aaatcttcaaggatggagactgtgagcaatgcaagtagcagctcaaatccaagttctcca
ggaagaattaaaggaaggcttgacagttctgaaatggatcatagtgaaaatgaagatttc
tcaatgtcttcacccatgccaggaaaaaaaagtgacaagagagacgactctgatctttct
gaacttgagaagcccaggagtcgaaagaagacacctgttacagatccagaagagaaatta
ggtatggatgacttaaccaaattggttcaagaacagaaaccaaaggggagtcagcgaggg
aggaaaagaggcacagctatgtctgattctgatgaacagcagtggccagaagagaagagg
ctcaaagaagattccttagaaaatgaggatgaacagaatagtcctcctaaaaagggcaga
agagggcgaccccctaaagcagttggtagtggcactccaaaagaagagccagcaattaaa
acatctaagagaggaggcaggaaaaagcctggacccccagcagcagaggaggaagaagaa
gaagagagacagagtgaaaacatggaacagaaacaaaagggcagacaacatagaacatct
aggagagcacaacagagccgcactggacgctccaaacaagcttctagtaaagaaaatgaa
tcaagtgaagagatggatgtttttcagagtagctctcctgtcaatgatgacattccacaa
gaagaaataatggaggaagaggaagtttctacaatcactgtacgacggcgaacctctaaa
agggaaagacgatga
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