Antechinus flavipes (yellow-footed antechinus): 127555241
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Entry
127555241 CDS
T08818
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127555241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555241
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127555241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127555241
NCBI-ProteinID:
XP_051843385
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All DBs
Position
3:complement(551090876..551103279)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTINIGSITTADGSALVKLGNTTVIC
GVKAEFAAPPVDSLNKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISHGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPAVTINEETGLAEVN
FKKKSHLNIRTHPIATSFAIFDDTLLIVDPTGEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVNKLMDEVIESVKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaacggtggaaccactggagtattataggagatttttgaaagag
aactgccgtccagatggaagagagcttggggagttcaggactactactatcaatataggt
tcaattaccactgcagatggttctgctttagtgaagttgggaaatacaacagtaatttgt
ggagttaaagcggagtttgcagcacctccagtagattcactcaataaaggttatattgtt
ccaaatgtggatcttccacctctgtgttcatcaagatttcgttctggacctcctggggaa
gaggcccaagtggctagtcagttcattgcagatgtgattgaaaattcacagataatacag
aaggaagatttgtgtatttctcatggaaagcttgcatgggttctatattgtgacctcatt
tgtcttgactatgacgggaacatcttggacgcctgcacatttgctttattagcagcttta
aaaaatgtccaattgccagcagttactataaatgaagaaactggcttagctgaagttaat
tttaaaaagaaaagtcatttgaatattagaacgcatccgatcgccacatcatttgctata
tttgatgacactttactcatagttgaccctactggagaggaggaacatctggcaacagga
accttaacagtcgtaatggatgaggaaggcaagctgtgttgtctacacaaaccaggtgga
agtggactaactggagctaaacttcaggattgtatgagtcgagcagttacaagacacaaa
gaagtaaacaaactgatggatgaagtaattgagagtgtgaaaccaaaataa
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