Antechinus flavipes (yellow-footed antechinus): 127555268
Help
Entry
127555268 CDS
T08818
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz05014
Amyotrophic lateral sclerosis
afz05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127555268
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127555268
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127555268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555268
03036 Chromosome and associated proteins [BR:
afz03036
]
127555268
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127555268
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127555268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127555268
NCBI-ProteinID:
XP_051843431
LinkDB
All DBs
Position
3:complement(552904517..553003241)
Genome browser
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGNTQTKPG
GLFGSNSFSQPATSSTSTGFGFGTSTGTSNSLFGAASTGASLFSSQNNAFAQNKPTGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSTSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGATTGLFGSSTATSSTTG
LFGNSTTNAGFAYGPNKTGFGTSTTGFGTNTGSLFGQPTQPTTSLFSKPFGPAATTQNAG
FSFGNTNTLGQPNTNTMGLFGGTQASSGSLFGTATNTSAATGFGTGTGLFGPTNTGFGAV
GSTLFGSNKPAAFGTTTTSAPSFGTTSSGLFGFGGSNSGSSIFGSKPAPGTLGTGLGTGF
GTALGAGQASLFGTNQPKIGAGTLGTGAFGTPGFSASTATLGFGAPQAPVALTDPNASAA
QQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVSR
EAEDLASPSDYPENGERFSFLSKAVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPENAVN
KHHSSVDDSIVVLNMRGALRNGLEGSSEEASFHDESLQDDREEEEESAYQIHPAGIVLTR
VGYYTIPSMDDLAKITNEKGECIVTDFTIGRKGYGSIYFEGVVNLTNLNLDEIVHIRRKE
VIVYLDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEDEEEHQCKAEAKKLKTAPMPPVGQPVPV
QMALSGKPALPSQSQSPEVEQLGRVVELDSDMIDITQEPVLDSIVEEIIPEEQEPVSAST
HIASSLGINPHVLQIMKASLLAEEEDSDWVLDQRFGKLPSKVDSSQEICSPRLPISSAHP
PKSRTLVGGLLQSKFTSGAFLSPSASVPECRNLRASALTSAPSTSPWSVPPPLAPVFAVP
TPAPEVQLKTVGVRRQPGLVPLEKSVTCGKGKLLMDMALFMGRSFRVGWGPNWTFVNSGD
QLSGCQEAGDHHNTESMEYGFLPNPITVKSLTESPFKVHVEKLSLRQRRMDRDLQLYQTP
LEIKLKHSTVHVDELCPLVVPNPGVAVIHDYADWVKEISGDLAESETVVKHWSLAWTLCE
AIWGHLKELEDQLDEPSEYVQSLERRRAFSRWLSQTAADRIEEEVALSRQDSPIEAVFSY
LTGRRISEACRLAQQTGDHRLALLLSQLGGSQPVRELLTMQLVDWHRLQADCFIQEDRLR
IFTLLAGKPVWRLSEQKSINVCSQLDWKRSIAIHFWYLLPPTASISQALSMYEEAFQNTS
ESEKYACSPLPSYLEDSGCVLEDDDTRRPLRDVCFHLLKLYSDRHYDLNQLLDPRSITSD
PLDYRLSWHLWEVLQSLNYTHLSEQCEGVLHASYAAQLESEGLWEWAIFVLLHITNTNMR
EKAVRELLTRHCRLSETPESWAKESFLTQKLCVPAEWIHEAKAVRAHMECDQHLEALYLF
KAGHWNHCHKLVIRHLASDAIINENYSYLKGFLEDLSPPERSSLIQDWETAGLVYLDYIR
VIEMLSQIQQLDCPGYELEKLHTKVTSLCNRIEQIHCSNAKDRLAQSDMAKRVANILRVV
LSLQQAPEGALDSPADLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaactccctttgggggtggcactggtggctttggcacaact
tcaacatttggacagaacactggttttggtaccacaagtggaggggcatttggaacatct
gcatttggttccaacaacaatactggaggcctctttggaaacacacagactaaaccaggt
ggcttgtttggatcaaattcatttagccaaccagccacctcctccacaagcactggcttt
ggatttggaacatcaacagggacatcaaatagcttgtttggagctgctagtaccggagca
agtctcttctcatcccagaacaatgccttcgcacaaaataaacctactggttttggaaat
tttggaacaagcactagcagtggaggtctatttggaaccacaaatacaacttccaaccct
tttggtggcacatctacttccctttttggaccgagtagttttacagcagctcctactgga
actaccataaagtttaatcctccaactggcacagatactatggtcaaagctggagttagc
actaacattagtaccaaacaccaatgtattactgctatgaaagaatatgaaagcaaatca
ctggaggaacttcgtttggaagattatcaagctaacaggaaaggtcctcagaaccaggtg
ggagcaggtgccaccacagggctgtttggctcctctacagccacctccagcaccacgggc
ctctttggaaactccactactaatgcaggttttgcatatggcccgaataaaactggcttt
gggacaagtactactggattcgggacaaatacaggtagtctctttggtcagccaactcag
ccaaccaccagcctcttcagtaagccttttggtccagctgcaactacccagaatgctggc
ttttcatttgggaataccaacactcttggacagccaaataccaacacgatgggtttattt
gggggaacccaagcctcatctggaagtctttttgggacagctacaaatacgagtgctgct
accggatttggaacaggaacaggcctctttgggccaaccaacacaggatttggtgctgtt
ggttcgaccctgtttggcagtaacaagcctgctgcatttggaactactacaaccagtgct
ccttcgtttggtacaaccagtagcgggctctttggttttggtggaagcaatagtgggagt
agtatttttggaagtaaacctgcacctggtactcttggaacaggacttggaacaggcttt
gggacagctcttggggctgggcaggcatctttattcggaaccaaccagcccaagatagga
gctgggaccttgggcacaggagcttttggaacccctggatttagtgcttccacagccact
ttgggttttggtgctcctcaggctcctgtagctttgacagatccgaatgcttcggctgcc
cagcaagctgttctccaacagcatatcaatagtctgacatactcaccatttggagactct
cctctcttccggaatcccatgtcagaccccaagaagaaagaagaacgcttgaaacccaca
aacccagctgcacagaaggctctgaccacccctacacactataaactgactcctcgccct
gccacgagagtccgacccaaggctcttcagacaacagggacagccaagtcccatctcttt
gatggactagatgatgatgagccatctctagccaatggagctttcatgcccaagaagagt
atcaagaagttggttttaaagaatctcaacaatagcaacctcttttctcctgttagtcgg
gaagctgaagatcttgcctcaccatcagattatccagagaatggggagagatttagtttt
ctcagcaaagctgttgatgaaaaccatcagcaggatggagatgatgactctcttgtgtca
cgtttctacactaaccccattgccaaacccatcccacaaacccctgagaatgcagtaaat
aaacaccatagcagtgtggatgactccattgtcgtgttaaacatgcgtggtgccttacga
aatggcctggaaggaagtagtgaagaggcctctttccatgatgagtctttgcaggatgat
cgagaagaagaagaggaaagtgcttatcagatccatccagcaggcattgttctcaccaga
gttggctattatacaataccttctatggatgacctagccaaaattaccaatgaaaaggga
gagtgtattgtaacagatttcaccataggtcgaaaaggttatggctcgatatattttgaa
ggagtggtgaatttaactaacctcaacttggatgaaattgtacatattcgtagaaaagaa
gtcattgtctatctggatgatgagctgaaacctcctgtgggagaaggcctaaataggcgg
gccgaagttactttggatggagtttggccaactgacaaaacttctcgttgcttaataaag
agtcctgaacgattagctgatatcaactatgagggcaggttagaagccgtttcacgaaaa
caaggtgcccaattcaaggaatatcgaccagagactggttcttgggtgtttaaggtttct
cacttttcaaagtatggcctacaggattctgatgaggatgaggaggagcatcaatgtaaa
gcagaagccaagaagttgaaaacagctcccatgcctcctgtaggccaaccagtaccagta
caaatggctctcagtggcaaacctgctcttccatcccagagccaaagcccagaggtggaa
cagctagggagggttgtggagctggacagcgatatgatagatatcacccaggagccagtt
ttggattccatagtagaagaaatcatccctgaagaacaagagcctgtatctgcttcaaca
cacattgcatcttcactgggtattaatccacatgtcttacagatcatgaaagcatctttg
cttgctgaggaagaagattcagattgggtccttgatcagcgctttggcaagcttccttcc
aaagttgactcttctcaagaaatctgttctcctagacttcccatttcatcagcacaccca
ccaaaatcccgaacattagttggtggtttactacagtctaagtttacaagtggagctttt
ctctctccaagtgcctctgtgccagaatgtcgaaatctcagagcttcagctttaacaagt
gctccttctacatctccttggtcagtccctccaccactggcccctgtgtttgcagtgccc
accccagcgcctgaggttcagttaaaaactgtgggtgttcgaagacaaccaggtcttgtt
cccctggaaaaatctgtcacctgtggcaaaggaaaactcttgatggatatggcactcttc
atgggacgttcattcagagttggctggggccccaactggacctttgtgaatagcggtgat
caactaagtggatgtcaagaagctggagatcatcacaacacagaatctatggaatatgga
ttcctgcctaatccaataactgtcaaatccttaacagagtccccattcaaagtccacgtg
gaaaaactgagcttgaggcaaaggaggatggatagagatttacaattataccagactccc
ttggagatcaagcttaagcatagcactgttcacgtagatgagctgtgtcctcttgtggtc
cccaatcctggagtagccgtcattcacgactatgcagactgggtgaaagagatatcagga
gacttagcagaatcagaaactgtagtaaagcactggagcctggcatggacactgtgtgaa
gccatctggggtcacctgaaagaactagaggatcagctggatgaacccagcgagtatgtg
cagagcctggaacgccgaagggctttctcccgctggctgtcacagacggcggctgatcgc
attgaagaggaagtagccctgtcccgacaagacagtcccattgaggcagtcttcagctac
ctcaccggcaggagaatcagtgaggcttgtcgcttggctcagcagacaggtgatcaccga
cttgcccttcttctgtcccagcttgggggcagccagccagtacgggagctgctcaccatg
cagcttgtagattggcaccggctccaggcagattgcttcatccaagaggatcgactacgc
atttttactcttttagctggaaaaccagtgtggcgactctcagaacagaagagtatcaac
gtatgttcccagctggattggaagcgctcaattgcaatccatttttggtatctccttcct
cctactgcttccatttcccaggctcttagcatgtatgaggaagcattccagaatacctct
gaaagtgaaaaatatgcttgtagtcccctgccttcataccttgaagactctggctgtgtc
ttggaagatgatgatactaggagacctctcagagatgtgtgctttcacctgctcaagctc
tacagtgatagacattatgatctgaatcaactgttggatccccggagtataacctctgat
cctttggactatcgcttgagctggcacctctgggaagttctgcaatccctgaattatacc
cacctgtcagagcagtgtgaaggtgtactgcatgccagctatgctgctcagcttgagagt
gaaggactgtgggaatgggctatctttgtcctactgcatatcaccaatacaaatatgcgt
gagaaggcagtaagggagctactcactcggcactgcaggctgtcagaaacccctgaatcc
tgggccaaggagtccttcttaacccaaaagctatgtgtgcctgctgagtggatccatgag
gccaaggctgtgcgtgcgcacatggaatgtgaccagcacctggaggccctctacctattt
aaggctggacactggaaccactgccacaaacttgtgatcaggcatttggcctctgatgcc
attattaatgaaaactatagctacctaaaaggattcctggaagacttatcccccccagag
cgcagcagccttattcaggactgggaaacagctggactagtttatctggattacattcgg
gtcattgaaatgctcagccaaattcagcaactcgattgtccaggctatgaattagagaaa
ttgcataccaaagtgacctcactttgtaaccggatagaacagattcattgctccaacgcc
aaggaccgattggcccagtcagatatggccaaacgtgtggccaatatccttcgggttgtt
ttgagccttcagcaggccccagaaggagccctggattcacctgcagacctgcagcgtgtc
ccgctgcggttgctggctccccacattggccggctccccatgcctgaggactatgcctta
gaggagctgcgtagcctcacacagtcctacctccgagaactgactgtggggagccagtga
DBGET
integrated database retrieval system
