Antechinus flavipes (yellow-footed antechinus): 127555375
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Entry
127555375 CDS
T08818
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-16
KO
K16507
protocadherin-16/23
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
127555375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127555375
Cell adhesion molecules [BR:
afz04515
]
Cadherins
Cadherin related
127555375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
127555375
NCBI-ProteinID:
XP_051843578
LinkDB
All DBs
Position
3:complement(558178128..558234560)
Genome browser
AA seq
3312 aa
AA seq
DB search
MELEAQQEARLGAPRRPVGPRPPRPFPLLPLLLLLLXGTGPGARGQAGSLDLQIDEEQPA
GTLIGDISAGLPADTATPHMYFISAQEGSGVGTDLAIDEQSGVVRTARVLDRERRDHYQF
TAVTPDGATVEVTVRVADINDHAPAFPRARASLQVPEHTAPGTRYPLEPAHDADAGRLGT
QGYALSGEGAGQAFRLETRPGPDGSPVPELVVSGELDRENRSHYTLRLEAYDGGAPPRRA
QALLDVTLVDINDHAPAFNQSRYRAVVSESLPPGSPVLQVFAADADAGANGAVTYEINRR
QSDGDGPFSIDARTGLLRLERPLDFEQRRVHELVVQARDGGAHPEVGSAFVTVHVRDSND
NQPTMTIIFLSEDGSPRVSEGAQPGQLVARISVSDPDDGDYAHVNVSLEGGDGKFALTTQ
DSVIYLVCVARRLDREEQDAYELRVTATDAGTPPLRAEAAFVLHVTDVNDNAPAFDRLLY
QPEPLPEVVLPGSFVARVTARDPDQGPNGNVAYSLVPGTHAHWFAIDASTGVITTAAPLD
YELEPRPQLTVLATDGGQPALSSTAVVHVVLQDVNDNEPVFKRTFYNASLPEGTAPGTCF
LQVTATDADSGPFGLLSYSLGAGLSSTGPPPFQIDPHTGEVCTSRSLDRDQGPPSFDFTV
TAVDGGGLKSLVYVKVFVSDENDNRPEFYPRIYAASVSTQSPPGTAILRVSAHDPDQGPH
GTLTYRILAGNSPPLFALDKDSGLVSVAWPLTGRADAVQQLEIGVQDAGGLRAEPNAQVN
ISIISGPLVPPVFEQAQYVFSVLEDVPPGTSVGTIRAHHPPGRPGSVALTLSGGDPQGLF
SLDGASGLLRTRRLLDRERLGPVLELEVRAGTGSPPAFALARVRVLLEDVNDNAPAFPSP
TDTVWLPPDAGPGTPVYTLRATDPDSGSNGHVTFTLVAGGKGAFAVDPATGHVQLVRTLG
GLAQELELEARDGGSPPLTSRFLLRVAVQEAGSRAGGTDPGVGGGIPKFDHPTYNVELSE
STAPGTKFLQVRAQGPKGGPPISYHLQSDGVGTTFGVDSRSGWLWVRTALDREAWEAYTL
PVLAVAGDGQGSLTGTATVRVSIQDRNDHGPRLTEEPTFLAVAENQPPGTTAGRITATDR
DSGPNGHLTYHLLQPPDESGAFHIHPQTGEVTTRRSLDREQQSSYQLLVQVQDGGAPPRS
TTGTVHVMVLDLNDNSPTFLHTLGAAGGGFPVQVLEGIPPGTLVTRLQAKDPDEGENGTI
LYSMTGPGSELFLLHPHSGELSTAGPLSRLERPHYVLTVNAQDQGNPPRSTSLQLLLQVL
PRSRSPAAPDASAAPAVLTLTAGEGLQPGSLLGSVALPGAPQGALTYTLVGGGDPEGTFA
LDAATGQLYLARPLDFEAGPAWRTLTVRAEEVGGGAPAYPAGPRLLRVELRVEDENEHAP
TFSRDPLTLALPENPLPGAVIYTFQAADADGPGPNSDVRYRLLRQSPPVPALRLDPRTGA
LSAPRGLDREATPALLLLVEATDQARNISLRRSTRVSARVFVTDENDNVPLFVSPPSSLL
PEDQPAGSVALYVVARDPDLGEAARLSYQLAGGNSDGHFHLHPSTGALSITRPLDREQRA
EHVLTVVAADHGSPPRSATQLLTVSVVDVNDEAPAFPQAAYHVHVPENRPPGTTVLTLHA
TDPDLGVNGQVTYGGVSGDTFSLDPNTGVLTTRQVLDREEQQEINLTVYAQDGGSPPLLS
HVSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTVLRASDPDAGPNGQINYQILNGD
VSGAFILDAVSGTLGTARSLDREAEPSFQLLVAARDGGQPALSATMLVTVAVLDANDHAP
TFTAPSYTVEVPEDAPPGTLLLQLEAHDPDAGANGRVAYYLGEGAGGAFLLEPGSGELRT
AVPLDRERQARYSFVVHAVDGAAAGPLSASVSVTIAVRDVNDHAPAFPASPLRLRLRPTR
TALGQGSSGPHVLATLRAEDRDAGANASILYRLAGPAPPGASVDSYTGEIRLARPPASLG
PRDRVLFIVATDLGRPARSATGVVIVGLQGETERGPRFPRPSSEAAIPEDAPPGTLIMSP
QATHAGGSTGAITYSILSGNEHDLFSIEPSTGALSVKAAGGLDFETSPRLRLVLQAESGG
SFGFTVLTLSLQDANDNAPRFLKPHYAAFVPESRPLSGPLLKVEADDLDQGPGGQVTYSL
APSQATRGLFHIDPAMGTITTTAILDREIWAETRLVVMATDRGSPPLVGSATLTVLVIDA
NDNRPTIPQPWEIQVPEDALLGSEIARVTGNDVDSGPALWYVLNPPGTQGPFSVGRYGGR
ISLTEPLDFEHMDCYQLHLLARDGQHEGSANLTVQVEDVNDNAPTFSQSLYQVTLAEHTT
PGSAILTISATDLDSGDNGRISYHLVSSAEGFDIDPSNGTLFMIQAASQSLGGLGTVDMV
LEARDHGVPGRTAQATVHIQLQDENDYTPSFVQPYYHITVAEDLPPGSTVLILEATDADQ
SRPHATLDYAIISGNRGQAFQLERHLSKGGSGPQALGCLVLLEPLDFESVTEYNLTVCAA
DRGKPPRSTSVLVVITVQDVNDNPPVFAQPHYRVAVPEDTPVGTELLRVAASDADPGPHG
LIYFTISSGDPAHHFELDESSGALRLARQLDREAQAQHQLVVEAADPPGAHFALVPVTVE
VQDVNEHGPAFPLLTLSASLPENQPPGTLVTTLHALDKDTGAFGRLHYTLLEPGLGPGLG
ATHWDMFALNGSSGELRARVPFDYEHTRSFQLLVGAADAGNLSASVTLSVLVTGEDEYDP
VFLAPSFHFQVPEGARRGYNLGHVLASDEDGGADGVVLYSLSAPSPYFGINQTTGALYLR
VDSQAPGAGASEAGGVGRARREAPRELQLEVVARGPLPGARSAAVPVTVDITHTALGLAP
DLNLLLVGAVAASLGVVVVLALAALVLGLVRARAHKAEAAPGSTLPPAPLSTSSLQKPGR
EAPSPPHSEHLYHQTLPGYGGPSTGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFP
RVASVASSLAARGPDSGIQQDADADGLSDTSCEPPPPDAWYKGRKAGLLLPGPGPGLYRE
EGPPAASTAGAFLGGCGLSPAPPGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLL
SWCPQFQPLASVFTEIARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPANSSGPG
VRGPFLPTHRSPISHEGSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAEP
GLEAPDEAELHI
NT seq
9939 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaggcgcagcaggaggccaggctgggtgccccccggcgccccgtgggcccg
aggcctccccgccctttccccctgctgccgctgctgctgctgctcctgnggggcacaggc
cccggggcacggggccaggcgggcagcctggacctgcagatcgacgaggagcagcccgcc
ggcaccctgatcggggacatcagcgcggggctgcctgcggacaccgccaccccccacatg
tacttcatctctgcccaggagggcagcggggtgggcacggacctcgccatagacgagcag
agcggcgtggttcggactgcccgagttctggaccgagaacgccgagatcactaccagttc
accgcggtcacacccgatggcgccaccgtggaggtcacagtgcgcgttgctgacatcaac
gaccacgcgcccgccttccccagggctcgggccagcctccaggtgcccgagcacacggcc
cccggtacccggtacccgctggagcctgcccacgacgccgacgccggtcgcctggggacc
caaggctacgccctgtctggggaaggggccggccaggccttccgactggaaacccgccct
ggccccgacggctcccccgtgcctgagctggtggtcagcggggagctggaccgggagaac
cgctcccactacacgctgcggctggaggcttacgatggcggggcgccgcccaggagggcc
caggccttgctggacgtgaccctggtggacatcaacgaccacgccccggccttcaaccag
agccgataccgggccgtggtgtccgagagcctccccccgggcagccccgtgctgcaggtg
ttcgctgccgacgccgacgcgggggccaacggagccgtgacctacgaaatcaaccgccgg
cagagcgacggggacggccccttctccatcgacgcccgcacgggcctgctgcggctcgag
cggcccctggactttgagcagcggcgcgtgcacgagctggtggtgcaggcccgcgacggg
ggcgcccaccctgaggtgggctcagctttcgtcaccgtgcacgtgcgggactccaatgac
aatcagcccaccatgaccatcatcttcctcagcgaggacggctcccctcgcgtgtctgag
ggggcgcagccgggccagttggtggctcggatctcggtgtccgaccccgacgacggcgat
tacgcccacgtcaacgtgtccctggaggggggggacgggaagttcgccctgaccacccag
gacagcgtcatctacctggtgtgcgtggcccggaggctagaccgagaggagcaagacgcc
tatgagcttcgcgtcaccgccaccgacgccgggacccctccgctgcgggcagaggccgcc
ttcgtcctgcacgtcaccgacgtcaacgacaacgccccggcctttgaccgcctgctctac
cagcccgagcccctcccggaggtggtgctccccggcagcttcgtggcccgggtcaccgcc
cgcgaccctgaccagggccccaatggcaacgtggcctacagcctcgtgcctgggactcat
gcccattggtttgccattgacgcgagcacgggagtaatcaccacagccgcccccctggac
tacgagctggagccgcggccccagctgaccgtgctggccaccgacggcgggcagcccgcc
ctgtcttccacagctgtggtccacgtggtcctgcaagacgtgaatgacaatgaacctgtg
ttcaagaggaccttctacaacgcctccctccccgagggcacggcgcccggcacctgcttc
ctacaggtgaccgctacagatgcagacagcggcccatttggcctcctttcctactcactg
ggagctgggcttagctccacaggcccgcccccgttccaaatcgaccctcatactggagaa
gtgtgcacatcccggagtctggaccgggatcaaggaccgcccagcttcgatttcactgtc
actgctgtggacgggggtggcctgaagtcacttgtgtatgtaaaggtgtttgtgtccgat
gagaatgacaacaggcctgagttctacccaaggatatatgcagccagtgtgagcacccag
agcccaccaggcacagctatcctgagggtcagtgcgcatgaccctgaccagggtcctcat
ggcaccctcacctaccgcatcctggctgggaacagccccccactctttgccttggacaag
gactcagggctggtgtctgtggcctggcccctgactggacgagctgatgctgtgcagcag
ctggagattggggtccaggatgctggtggccttcgagctgagcccaatgcccaggtcaac
atcagcattatctctgggcctctcgtgcctccagtctttgaacaagcacaatacgtcttc
tccgtgcttgaagatgtgcctccagggaccagtgtgggcaccatacgggcacaccaccct
ccaggccgcccgggctctgtggccctcacactctcggggggagacccacagggcctcttc
tcgttggatggggcgtcaggattgctgcggacacggcgcctgctggacagggagcgcctg
gggccagtgctagagctggaggtgcgtgcaggcacagggtctccgccagcttttgccctg
gctcgggttcgtgtgttgctggaagatgtgaatgacaatgcacctgccttcccttcaccc
acggacactgtgtggctgcccccagatgctggcccgggcacccctgtgtatacgctgcgg
gcaactgatcccgattctggtagcaatggccatgtcaccttcacactggtggctgggggg
aaaggagcctttgccgtggaccctgccacgggccacgtgcagctcgtgaggacactgggt
gggctggcccaagagttggagctagaagcacgtgatggtggctctccccccctgaccagc
cgcttcctgcttcgagtagctgtgcaagaggcagggtccagggctggtgggactgacccc
ggggttgggggtgggatccccaagtttgaccaccctacttataatgtggagttgtctgaa
agtacagccccaggcacaaagttcctacaggtacgggcacagggccctaagggagggccc
cctatatcctaccacctacagtcagatggggtgggtacaacctttggtgtggactcacgt
agtggatggctttgggtgcggacagcattggaccgtgaggcatgggaagcatacacattg
ccggtcctggctgtggctggggacggtcaagggagcctgacaggcacagccactgtgagg
gtgagcatccaagaccgcaatgaccatgggccccgtctcactgaggagcccaccttcctg
gctgtggctgagaaccagccaccgggaaccactgcaggccgcattacagccactgatcga
gactcgggccccaatggacacctcacttaccatctactgcagccaccggatgagagtggg
gccttccatatccatccacagacaggggaagtgaccacaagacgcagtctagaccgtgag
cagcagagcagctaccagctcctggtacaagtgcaagatggaggcgctcctccgcggagc
accacaggcacagtgcatgtcatggtgctagacctcaatgataacagtcccaccttccta
cataccctgggggcagctggtggcgggtttcccgtgcaggtattggaaggcattcctcct
ggaacccttgtcacacgcctacaggcaaaggacccagatgaaggagaaaatggaacaatt
ctgtacagcatgacaggtcctggctcagagctcttcttgctacatcctcactctggagag
ctgagcacagctggacccctgagtcgattagagaggccccactatgtgctaacagtgaat
gctcaggaccagggcaatccccccagaagcaccagcctccagctactcctgcaggtgctg
ccccggagcagatccccggcagcccctgatgcctcggcagcccccgcagtgctgacactg
acagcaggagaggggctccagccaggctccctgctgggatcggtggcacttccaggggcc
ccccaaggcgcacttacctacacactggtaggtggaggtgaccctgagggcacatttgca
ttggatgcagccacaggtcagctgtacctggccaggcctctggacttcgaagcggggccg
gcatggagaaccctgacagtgcgggctgaggaggtgggtgggggcgccccagcttaccct
gccgggcctcggctgctgcgtgtggagctgcgtgtggaggacgagaacgagcacgcaccc
accttttcccgggacccactcactctggcgctgcctgagaacccgctcccaggcgctgtg
atctacacattccaagccgcagatgccgacgggcctggcccaaatagtgacgtgcgctac
cgcctgctgcgccagtcgcccccagtccctgccttgcgattggaccctcgcactggtgcc
ctcagtgcccccaggggcctggaccgggaggccacccctgccctgctcttgctggtggaa
gccactgatcaggcccggaacatcagcctgcggcgcagcacgcgtgtctcagcgagggtg
tttgtgacagacgagaacgacaatgtgccgctctttgtctcaccgcccagctccctgctt
cctgaggaccagccagctggttctgtggccctctatgtggtggcccgggatccagacctg
ggtgaggctgcccgcctctcctaccagctggcaggcggcaacagcgatgggcacttccat
ctgcaccctagcactggtgcactgtctatcacgcggcccctggaccgggagcagcgagct
gagcacgtgctgactgtggtcgccgcagaccatgggtcgccgcctcgatcagccactcag
ttactgacagtcagtgtggtagatgtcaatgatgaggcacccgccttcccacaggcagcg
taccatgtccatgtgcccgagaaccgtccaccgggcaccactgtgctcaccttgcacgcc
accgaccctgacttgggtgttaatggacaagtgacatacggtggtgtctctggtgacaca
ttctccctggacccaaacaccggggtgctcactactcggcaggtcttggaccgagaagag
cagcaagaaatcaacctaactgtgtatgcccaggacgggggctcaccacctctgctgagc
cacgtgtccgtgcatgtgaccgtggaggatgagaatgaccatgcgccggcctttgggagc
tcccatctctccctggaggttcccgagggccaggacccccagacactgaccgtgctcagg
gcttcggatcctgatgctggccctaatgggcagattaactatcaaattctgaacggtgac
gtgtccggagccttcatcctggatgcggtctcggggaccctgggcacagcacgatccttg
gaccgggaggcagagccatcattccagctcttggtggcagccagggatggaggccagcct
gcgctgagcgccaccatgctggtgactgtggcggtgctggatgccaatgatcacgccccc
accttcacagccccgtcctacacggtggaggtgcccgaggacgcccccccggggacgctg
ctgctgcagctggaagcgcacgatcccgacgcgggggccaacgggcgcgtggcctactac
ctgggggagggcgcgggcggcgccttcttgctggagcccggctcgggagagctgcgcacg
gctgttcccctggaccgggagcggcaggctcgctacagctttgtggtgcatgccgtggac
ggggccgcagcggggcccctcagtgccagtgtgtccgtcaccatcgctgtgcgagatgtt
aatgaccacgcacccgccttcccggccagccccctcaggctccggctgcggcccacacgc
accgccctgggccagggctcctctggtcctcacgtcttagccacgctgagggccgaggac
cgggatgctggcgccaatgcctccatcttgtaccggctggcggggcccgcaccccctggc
gcctctgtggactcatacaccggggagatccgcttggcacgcccacccgcctccctgggc
ccccgggaccgtgtactcttcattgtggccactgacctgggccgcccagctcgttctgcc
actggcgtggttattgtgggattacaaggggaaacagaacgtggccctcgatttccccgg
cccagcagcgaggctgctattcctgaggatgccccaccagggaccctcattatgtccccc
caggccactcatgctgggggctccacaggcgctatcacctacagcatcctcagcggcaac
gagcatgatcttttctccattgaacccagcacaggggcactctcggtgaaggcagcaggg
ggactggactttgagacaagcccaagactgcggctggttctgcaagcagagagtggcggt
tcctttggcttcacggtgctgacgctgagcctccaggatgctaacgacaatgctccacga
tttctgaagccacactatgcagcctttgtacccgagtctcgccctttatctgggcctctc
ctgaaggtagaggctgatgacctggaccagggcccaggcgggcaagtcacttatagcctg
gctccatcccaggccactcggggactgtttcacatagacccagctatgggtaccattacc
accacagctatcctggaccgagagatctgggcagagactcgcctggtggtgatggccaca
gatagagggtccccacccctagtgggctcagccacactgactgtactggtcattgatgcc
aatgacaaccgaccaaccatcccccagccctgggagatccaagtaccagaggatgcactt
ctaggatcagagattgctcgggtgacggggaacgatgtggactcaggacccgccctgtgg
tatgtgctgaacccgcctgggacccagggccccttcagtgtgggacgctacggaggccgc
atctccctcacagagccccttgactttgagcacatggactgttatcaactgcacctgctg
gcccgggatgggcagcatgagggcagcgccaacctcacggtacaggtagaggatgtcaat
gacaacgcacccaccttctctcaaagcctctatcaggtgaccttggcagagcacacaact
ccgggcagtgcaatcctgaccatctctgccactgaccttgattctggagacaatggccgt
atttcctaccacctcgtgtccagcgcagagggttttgacatcgaccccagcaacgggacc
ctgttcatgattcaagcggcctcccagagcctgggcggtttgggcacagtggatatggtg
ctggaagcacgcgaccatggggtcccgggacggacagcacaggccacagtccacattcag
ctgcaggatgagaacgactacactcccagctttgtgcagccctactaccacatcactgtt
gctgaggacctgcccccaggatccacagttttaatcctggaagctacagatgctgaccag
agccgaccgcacgctacactggactatgccatcatcagtggcaaccgcggacaggccttc
cagctggagaggcacttgtccaaaggtggctccggtccccaggccttgggctgtctggtg
ctgcttgagccgctggactttgagagcgtcactgagtacaatttgacggtgtgtgcagcg
gatagagggaagcctccacgaagcacaagtgtcctggtcgtcatcaccgtgcaggacgtc
aacgacaacccgcccgtcttcgcccagccccattaccgtgtggctgtgccggaggacact
cctgtgggcactgagttgttgcgtgtggcagcctctgacgctgatccgggcccccacggt
ctgatttacttcaccatcagttctggggaccccgcacaccactttgagctggatgaaagt
tcaggggccctccgcttagcacgacagctggaccgagaagctcaagcacagcatcaactg
gtggttgaagcagctgaccctcctggagcccactttgccctggtgcctgttacggtggaa
gtacaggacgtcaacgagcacgggcctgcctttcccctgcttactctgagtgccagcttg
cctgagaaccagcctccgggaacactggtcaccaccctccatgccctggataaggacact
ggggcctttgggcggctccactacacgctactagaaccaggattagggccaggactggga
gccacccactgggacatgtttgcattgaatggctcatcaggtgaacttcgggcaagagtc
ccttttgactatgagcacacccgcagcttccagttgcttgtgggcgcagcagatgcaggg
aacctctcagcctcagtcaccttgtctgtgctagtaactggtgaagatgagtatgatcct
gtcttcctagcaccttcattccactttcaagtgcctgagggtgcccgtcggggctacaat
ctgggccatgtgctggcctcagatgaggatggaggcgcggatggtgtggtcctgtactcc
ctttctgctccctccccgtattttgggatcaaccagaccacaggtgctctgtacctacga
gtggacagccaggcaccaggtgcaggggccagcgaagccgggggagtaggccgggcgagg
cgggaggcaccccgggagttacagctggaggtggtggctcgagggcccctgcctggagcc
cgaagtgctgcagtgcctgtgactgtggatatcacccacacggcgctaggcttagcccct
gacctcaacctgctgttagtgggtgctgttgccgcctccctgggtgtggtggtggtcctg
gcactagcagccctggtgttggggctagtacgtgctcgagctcacaaggcggaggcagcc
ccggggtccactcttccacctgcccctcttagcaccagctccctgcaaaaaccaggccga
gaggcccctagtcccccacattccgaacacctttaccaccagacgttgcctgggtatggt
gggcctagcacaggcggtccttacccacgcggtggctccctggacccttcccactccagt
gggcgtggttctgctgaggcagctgaagatgacgagatacggatgatcaatgagttcccc
cgagtggccagcgttgcttcttcattggctgcccgtggccctgactctggcatccaacaa
gacgctgatgctgacggactgagcgatacatcctgtgagccacctccacctgatgcctgg
tacaagggccgaaaggctgggctgctgcttccaggccctgggcccgggctttaccgagag
gagggcccaccagctgccagcactgctggggccttcctaggaggctgtggcctgagccct
gcccctcctggagactatggtttcccagctgacggcaagccctgcgtggcaggggcactc
acagccattgtggcgggagaagaggagctccggggcagctacaactgggactacctgctg
agctggtgtccccagttccagccactggccagtgtcttcactgagattgctcggctcaag
gacgaggcacggccctgcccacctgcaccccgaattgacccaccacccctcattaccgct
gtggcccaccctggggccaagtctgtaccccctaagccagctaactcttcaggcccggga
gtccgcggccccttcctgcccacccaccgctcccccattagccatgaaggatccctgtcc
tcagctgccatgtcccccagtttttcaccttcactatcaccgctggctgcccgctcccct
gttgtttccccctttggggtagcacaaggaccctctgcctcagctctgagtgcagagcct
ggcctggaggcccctgatgaggcagagctacatatctag
DBGET
integrated database retrieval system
