Antechinus flavipes (yellow-footed antechinus): 127555461
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Entry
127555461 CDS
T08818
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127555461
09123 Folding, sorting and degradation
03018 RNA degradation
127555461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555461
03041 Spliceosome [BR:
afz03041
]
127555461
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127555461
mRNA cycle factors
Stress granule specific factors
127555461
Spliceosome [BR:
afz03041
]
Complex C
Other components
Complex C specific factors
127555461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RBD_DEAH11
RBD_RDR6
RRM_3
TEX47
POP1_C
Motif
Other DBs
NCBI-GeneID:
127555461
NCBI-ProteinID:
XP_051843718
LinkDB
All DBs
Position
3:complement(565835230..565851833)
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AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGYFMPAVPQAQNRP
PYYAPNQIAQMRPNPRWQQGGRPQGFQGVPNAIRQSGPRPTLRHLTPASNTQASRGLPTT
PQRVGVPTAVQNLSPRPSVATPAPRAVPPYKYAANVRSPHPAIQPLQTPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQTMHNNLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHHAKKEAAQKVAVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcggccagcagttaccccatggcctccctgtacgtgggtgacttgcactcg
gatgtcaccgaagccatgctgtatgagaagttcagccccgctggacctgtgctgtccatc
cgggtctgcagggacatgatcaccaggcgctccctgggctatgcctatgtcaacttccag
cagccagcggatgctgaacgtgccctggataccatgaactttgatgtaattaaaggcaaa
cccatccgtatcatgtggtctcagcgagatccctctttgaggaaatcaggtgttgggaat
gttttcattaaaaatctggataaatccatagacaacaaggcactttatgacaccttttca
gcatttggcaacatattgtcctgcaaggtggtgtgtgatgagaatggttctaaaggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgcttctcaacgaccgaaaagtgtttgttggtagattcaagtcaaggaaagaacgggaa
gcagaattgggtgccaaagctaaggaattcactaatgtatatatcaaaaactttggcgat
gacatggatgatgaaagactgaaggaacttttcagcaaatatggtaaaactctgagtgta
aaggtgatgactgactctagtggaaaatccaaaggttttggttttgtgagttttgagaaa
catgaggatgctaataaggcagttgaagaaatgaatggaaaagacatcaatgggaaaatg
gtgtttgtaggccgggcacagaaaaaagttgagcgccaggctgaattaaaacggaaattt
gagcagctaaagcaggagagaattagccgctaccagggggtgaatctctatattaagaac
ctggatgacaccattgatgatgaaaaattaaggaaagaattttcaccttttggatcaatt
accagtgccaaggtgatgttggaggatgggcgaagcaaaggctttggctttgtctgcttc
tcttctcccgatgaggcaaccaaggccgtgacggagatgaatgggcgcatcgtgggctcc
aagcccctatacgttgctttggcacagaggaaagaggagagaaaagctcacctgaccaat
caatacatgcagcgcatcgcaggaatgagagcccttcctgccaacacgatcattaaccag
ttccagcccactcctggaggatacttcatgcccgccgtgccccaggctcaaaatagacct
ccttattatgctcccaatcaaatagcccagatgagacctaatccacggtggcaacaaggt
gggagacctcaaggcttccagggagtgccaaatgccattcgccagtctgggccacgccca
actcttcgccacctcactccagccagtaatacccaggcttctcgaggtctcccaactact
cctcagcgagtaggggtgcccactgctgtgcagaatttatctcctagaccctctgtagct
acccctgcacctagagctgttcctccttacaaatatgctgcaaatgtccgaagcccccat
ccagctatccaacctctgcagacacctcagccagcagtccacgtgcaaggccaggagccc
ctgacagcttccatgctggccgctgctcctcctcaggaacagaagcagatgctaggagag
cgtttgttcccattgattcaaaccatgcacaataatttagcggggaagattacaggtatg
ctgctagagattgataattctgaactgctgcacatgctggagtctccagaatccctccga
tcaaaggtagaggaagccgttgcagtattacaagctcatcatgccaagaaggaagctgct
cagaaggtggctgtggttgctgctacctcttag
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