Antechinus flavipes (yellow-footed antechinus): 127555637
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Entry
127555637 CDS
T08818
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03082
ATP-dependent chromatin remodeling
afz04714
Thermogenesis
afz05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127555637
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
127555637
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127555637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127555637
03021 Transcription machinery [BR:
afz03021
]
127555637
03036 Chromosome and associated proteins [BR:
afz03036
]
127555637
Transcription factors [BR:
afz03000
]
Eukaryotic type
Helix-turn-helix
ARID
127555637
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127555637
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127555637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
127555637
NCBI-ProteinID:
XP_051844059
LinkDB
All DBs
Position
3:complement(577268170..577356931)
Genome browser
AA seq
2301 aa
AA seq
DB search
MAAQVAPATASSLGNPPPPPPPSELKKAEQQQQQQQREEAGGEAAAAEQQRGEMKAAAGG
PESEGPAGGPPPPLGKELQDGAESNGGGGGGAGAEPDLKNSNGNAGPRPALNNNLPEPPG
GGGGGGGSGSGSSDGVGAPPPPPPHSAAAAAALPPPAYGFGQAYGRSPSAVAAAAAVAAA
VFHQHGGQQSPGLAALQSGGGGGGGGLEPYAGPPQNSHGDHGFPNHQYNSYYPNRSAYPP
PPQAYALGSPRGGAPGPASAAAGSKPPPASSASASVAAAAASFPPQRFGAMGGGGPAAAG
GGTPQPTATPTLNQLLTSPSSARGYPGYPGSDYGGGGPQDGGTAKGPADLASQYAGSGQA
WGSAASGAGQQRSHHAPMSPGSSSGGAGQPLTRTPQPSSPMDQMGKMRPQPYGGSNPYSQ
QQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMGSLSYAQQIPPYGQQGPSGYG
QQGQSPYYNQQSPHPQQPPYSQAPPSQTPHAQPSYPQQPQSQPPQLQASQPPYSQQPSQP
SHQQSPSPYPQQQSTAQQHPQSQPPYSQQQAQSPYQQQPPQQTASAALSQQSAYPQSQAQ
QPQQTAYSQQRFPPPQELSQDSFGSQASSAPSMASSKGGQEDMNLSLQSRPSSLPDLSGS
IDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPAS
VAQSRSGPLSPAAVPAGTQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPPMPQYSS
PQPGSALSPRQSSGQMHAGMGSYQNSMGSYGPQGGQYGPQGGYPRQPNYNTLPNANYASA
GMAGSMNPMGAGAQMHGQSGMPPYSGLPPGRMSHASMGSRPYGPNMANMPPQVGSGMCPP
PGGMNRKAQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGLNSMAGMINPQGP
PYPMGGNIANNSAGMAASPEMMGLGEVKLTPATKMNNKADGTPKPESKSKKSSSSTTTNE
KITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQ
VNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKS
QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGI
QDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGNDPFVS
SGQGPNSGMGDPYNRATGPGLGNMAMGQRQHYPYGGPYDRVRAESGLGPEGSLGTGAPQP
NLMPSNPDSGMYSPSRYPPQQQQQQPPQPQQQQQRHDSYGNQFSTQGTPSSSPFPSQQTA
MYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSSGQGQPPQQQLPPAQPQTASQQQPAQ
PSPQQDVYNQYGNAYPTAGADRRPAGGPQNQFPFQFGRDRVSAPPGSNAQQSMPPQMMGG
PMQPTTEGPQQGTMWQGRNDMGYNYPNRQNTGSAPQGPAYHGVNRTDEMLHTDQRVNHEG
PWPSHGTRQPPYGPSAPVPPMTRPPQSNYQPPPSMQNHIPQVSSPAPLPRPLENRTSPSK
SPFLHSGMKMQKAGPPVPASHIAPAPVQPPLIRRDITFPPGSVEATQPVLKPRRRLTTKD
IGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLGQLPGLLELLVEYFRRC
LIEIFGILKEYEVGDPGQRTLLDPERFKKASSPSPAEGEEEEELLSPKMEEEEEEEKEEE
EEEAAFAGKDKVLSESSEEKLVSKFDKLPVKVVQKNDPFVVDCSDKLGRVQEFDSGLLHW
RIGGGDTTEHIQTHFESKMELPGSQSREPVPVAPQKRLPTAEGTSGGRDKEAPLPDGPAE
KRITATMDDMLSSRPSTLSDEGPKNAETPKESGKFPFGINPVQSHRNIKILEDEPHSKDE
TPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPER
KQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPV
LDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRL
EKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLA
ATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVS
PLMNSLVSQVICDVLFLIGQS
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccaccgccagcagcctgggcaacccgccgccgccgccg
ccgccctcggagctgaagaaagcggagcagcagcagcagcagcagcagcgagaggaggcg
gggggcgaggcggcggcggcggagcagcagcgcggggagatgaaggcagcggccggcggc
ccggaaagcgagggccccgccggggggccgccgccgccgctcggcaaggagctccaggac
ggggccgagagcaacgggggtggcggtggcggggccggcgcggagccggacctcaagaac
tccaacgggaacgcggggcccaggcccgccctgaacaataacctcccggagccgcccggc
ggcggtggcggcggcggcggcagcggcagcggcagcagcgacggggtgggggcgccgccg
ccgccgcctcctcactcggccgccgcggcggccgccctgccgccccccgcctacggcttc
gggcaggcgtacggccggagcccgtcggccgtggccgccgccgccgccgtggccgccgct
gtcttccaccaacatggcggacaacaaagccctggcctggcagcgctgcagagcggcggc
ggaggcggcggtggcggcctggagccctacgctgggcccccgcagaactcgcacggcgac
cacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccgccg
cccccccaggcctacgcgctgggctccccgagaggcggcgccccgggcccggcctcggcc
gccgccggctccaagccaccccccgcgtccagcgcctcggcctcggtagcagcagcagcc
gcgtcctttcctccgcagcgctttggggccatgggtggaggaggccccgcggcggccggc
gggggcaccccgcagcccacggccacccccaccctcaaccagctgctcacgtctcccagc
tcggcccggggctacccgggctaccccggcagcgactacggcgggggcgggccccaggac
gggggcaccgccaagggccccgcggacttggcctcgcaatacgcgggcagcggtcaggcc
tgggggtcggccgcctcgggagccggccaacaaaggagccaccacgcgcctatgagcccc
gggagcagcagcggcggcgccgggcagccgctcacccggaccccgcagccatccagtcca
atggatcagatgggcaagatgagacctcagccatatggtggcagtaacccatactcacag
caacagggacctccatcaggaccacagcaaggacatggatacccaggacagccatatgga
tcccagactcctcagcggtaccccatgaccatgcaaggccgggcgcagagtacaatgggc
agcctctcttatgcacagcagattcctccttatggtcagcaaggtcccagcgggtatggc
caacagggccagagtccatattacaaccagcaaagtcctcatccacagcagccgccctat
tcccaggcaccaccatctcagactccccatgctcagccttcctatccacaacagcctcag
tcacagccaccacagctccaggcatcccagcctccttattctcagcagccatcccagcct
tctcatcagcagtccccgtcaccatatccccagcagcagtcgacagcacaacagcacccc
caaagccagcccccctactcccaacagcaggcacagtcaccctaccagcagcagccacct
cagcagacagcctctgcagccctctctcagcagtctgcgtaccctcagtcccaggcacag
cagccacaacaaactgcctattcccagcagcgcttccctcctccccaggaattatctcaa
gactcatttgggtctcaggcatcctcagccccttcaatggcttccagtaaaggagggcaa
gaagatatgaacctgagtcttcaatcaagaccctctagcttgccagatctgtctggctcg
atagatgatctccccatggggacagaaggagctctgagccctggcgtgagcacttcaggg
atttccagcagccaaggagaacagagtaacccagctcagtctcctttctctcctcatacc
tccccccatctgcctgggatccgagggccttccccctccccggtgggctctcctgccagt
gttgctcagtctcgctcaggaccactctcacctgctgcagtgccagcaggcacccagatg
ccgcctcggccgcccagtggccagtcagatagcatcatgcacccttccatgaaccagtcg
agcatcgcccaggaccgaggctacatgcagagaaaccctccgatgccccagtacagctcc
cctcagcctggttctgccttatctcctcgtcagtcgtcaggacagatgcacgcaggcatg
ggctcctaccagaactccatgggaagctatgggccccaggggggtcagtatggccctcaa
ggaggctaccccaggcagccaaactataacaccctgcccaatgccaactatgcaagtgca
gggatggcggggagcatgaaccccatgggggctggggctcagatgcacggccagagcggc
atgccgccctacagcggactccccccgggaaggatgagtcatgcctccatgggcagtcgg
ccttacggtcccaacatggccaacatgccgcctcaggttgggtcggggatgtgcccccca
cctgggggcatgaaccggaaagcacaagaaaccgccgttgccatgcatgttgctgccaac
tccatccaaaacaggcctccaggttatcccaatatgaatcaagggggcatgatgggaact
gggcctccttatgggcaaggacttaacagtatggctggcatgatcaaccctcagggtccc
ccctatcccatgggtgggaacatagccaacaattcagcagggatggcagctagcccagag
atgatgggtctcggggaagtcaaattaacgccagccaccaaaatgaacaacaaggcagat
ggaacacctaaacccgaatccaaatctaagaagtccagttcctccactaccaccaatgag
aagatcaccaagttgtacgaattagggggtgagcctgagaggaagatctgggtggaccgc
taccttgccttcacggaagagaaagcaatgggcatgaccaacctgcctgctgtgggcagg
aaacccttggacctctaccgcctctacgtgtctgtgaaggagattggcggactgactcag
gtcaataagaacaagaagtggcgggagctggccaccaacctcaacgtgggcacctcgagc
agcgctgccagctccttgaaaaagcagtacatccagtgtctctacgcgtttgagtgcaag
attgagcggggagaagaccctcccccggatatctttgcagccgcagattccaagaagtcc
cagcccaagatccagccgccatcaccagcggggtcagggtccatgcaggggccacaaacc
cctcagtcaaccagcagttccatggcagaaggaggagacttgaagccaccaactccagca
tccaccccacatagtcagatgccccctttgccaggcatcaggagcaactctgtggggatc
caggatgcttttgctgatggaagcgaccccacgttccaaaagcgaaattccatgactccg
aaccctgggtaccagcccagcatgaatacctctgacatgatggggcgcatgtcctatgag
ccaaataaggatccttacggcagcatgaggaaagctccaggaaatgatcctttcgtgtcc
tcagggcagggccccaacagtgggatgggggacccctacaaccgtgccacaggccctggt
ttggggaatatggcaatgggacaaaggcagcattacccatatggaggcccttacgacaga
gtgagggcggagtccggactcggacctgagggaagcctgggcacaggggccccacagcca
aacctcatgccttccaacccagactcggggatgtactctcccagccgctatcccccgcag
cagcagcagcagcagccgccacagccgcagcagcagcagcagcggcacgattcctatggc
aatcagttttccactcaaggcaccccttccagcagcccattccccagccagcaaaccgcc
atgtaccaacagcagcaacagaattataagcggcccatggatggcacctatggccctccg
gccaagcgccacgaaggggagatgtacagcgtgccgtacagcagcggacaaggccagccg
ccacagcagcagttgcccccggcccagccccagacagccagccaacagcaaccagcccag
ccatctccccaacaggacgtgtacaaccagtatgggaatgcttatcccaccgctggtgct
gatcgccggccagcaggaggccctcagaaccaattcccattccagtttggccgagaccgg
gtctcggcaccccctggctccaatgcccagcagagcatgccaccccagatgatgggtggc
cccatgcagccaactacagagggtccccaacagggcaccatgtggcaggggcgcaatgat
atgggctacaactaccccaatcggcagaacacaggctctgccccccaggggcctgcctac
catggggtgaaccgaacagatgaaatgctgcacacagatcagagggtcaatcacgagggc
ccgtggccttcccatggcacccgccagcctccatacggtccctcggcccctgtgcccccc
atgacgaggccccctcaatctaattatcagcccccgcccagcatgcagaatcacattcct
caggtatccagccccgcgccccttccccggcccctggagaaccgcacatcgcccagcaaa
tccccgttcttacactcggggatgaagatgcagaaggcaggtcctccagtgcctgcctca
cacatagcacctgcccccgtgcagccccccctgatcaggcgggacatcaccttccctccc
ggctctgtggaagccacacagcctgtgttgaaacccaggaggcggctcacgacgaaagat
attggaactccagaggcgtggcgagtgatgatgtccctcaagtcgggcctgttggcagag
agtacgtgggccttagacaccatcaacatcttgttgtatgatgacaacagcattatgacc
ttcaacttgggccagctgccgggactgttggagctcctcgtggaatatttccggcgttgc
ttgattgagatctttggcattctgaaggagtatgaggtgggtgacccaggtcagagaaca
ttgctagacccggagagattcaagaaagcttccagcccgtccccagcggaaggggaagaa
gaggaggagcttctgagccccaagatggaagaggaggaggaggaggagaaagaggaggaa
gaggaggaggctgcatttgcaggcaaggacaaggtgctctcagagagcagcgaggagaag
cttgtcagcaagtttgacaagctgcctgtcaaagtcgtgcagaagaacgacccctttgtg
gtggactgctcggacaaactggggcgagtgcaggagtttgacagcggcttgctgcactgg
cggatcggcggcggggacactaccgagcacatccagacccactttgagagcaagatggag
ctacccgggagccagtcccgggagccggtgcccgtggcccctcagaagcggctccccact
gccgagggcacctccggtgggagagataaggaggcccccctgcccgacggccccgccgag
aagcggatcactgccaccatggatgacatgttgtcgtctcggcccagcaccctgtccgac
gagggccccaagaacgccgagacccccaaggagagcggcaagtttccttttggcatcaat
cctgtgcagagccaccggaacatcaagatcctcgaagatgagccccacagtaaggacgag
accccactgtgcaccctcctggactggcaggactccctcgccaagcgctgcgtctgcgtc
tccaacaccatccggagcctgtcgtttgtgccgggcaacgactttgagatgtccaagcac
cccgggctgctgctgatcctcggcaaactcatcctgctgcaccacaagcacccggagcgc
aagcaggcgccgctgacctacgagaaggaggaggagcaggaccagggcgtgagctgcaac
aaagtggagtggtggtgggactgcctggagatgctccgggaaaacaccctggtcacgctc
gccaacatctcaggtcaactggacctctccccgtaccccgagagcatctgcctgccggtt
ctggacggactccttcactgggcggtctgcccttcggccgaagcccaggaccccttcccc
accctgggccccaatgccgtcctctccccccagagactggttctggaaaccctcagcaaa
ctcagcatccaagacaacaacgtggacctgatcctcgccacgccccccttcagtcgcctg
gagaagctctacagcaccatggtgcgcttcctcagtgaccgaaagaaccccgtgtgccgg
gagatggccgtggtgctgctggccaacctggcccagggagacagcctggccgcccgggcc
atcgccgtgcagaagggcagcgtcgggaacctgctgggcttcctggaggacagcctggct
gccacccagttccagcagagccaggccagcctcctgcacatgcagaaccccccctttgag
ccgaccagcgtggacatgatgcgccgggcggcccgggcgctgctcgccctggccaaggtg
gacgagaaccactcggagttcacattgtacgagtcacggctgctggacatctcggtgtcg
ccgttgatgaactcattggtctcacaagtcatttgtgacgtactgtttttaattggccag
tcatga
DBGET
integrated database retrieval system
