Antechinus flavipes (yellow-footed antechinus): 127555683
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Entry
127555683 CDS
T08818
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127555683
03015 mRNA surveillance pathway
127555683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555683
03041 Spliceosome [BR:
afz03041
]
127555683
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127555683
Spliceosome [BR:
afz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127555683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
127555683
NCBI-ProteinID:
XP_051844149
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All DBs
Position
3:complement(579876243..579913052)
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AA seq
914 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRASPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEEIPELPEPSVKAKEPSIQEATS
TSDILKAPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRTRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRISSPPRKTRRLSPSSSPPRRRHRPSPPASPPPKTRRSPTPQQS
NRTRKSRGSVSPGRTSGKATKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSNVKNGEVGRRRRHSASRSASPSPRKRQKES
SPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKP
RSSPVTKRRSPSLSSKHRKGSPPSRSTRETRSPLPNKRHSPSPRPRVPHTSASPTPLRRG
ASSSPQRRQSPSPSTRPIRRVSRTPEPRKAKKAASPSPQSVRRVSSSRSASRSPEPAAKK
HQAPPSPTQSQSPSTNWSPAAPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKAAAAAAAAVASTTTSAQEEPEAETEPKKETESEAEDNLDDLEKHLREK
ALRSMRKAQVSPQS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggacaatcgtttcagcaataaa
cagaagaagctactgaagcaattgaagtttgcagaatgtctagaaaaaaaggtagacatg
ggcaaagtaaatttggaggtgataaagccttggattacaaaacgagtaacagaaattctt
ggatttgaggatgatgtagtaattgaattcattttcaaccagctggaagtgaagaatcca
gattccaaaatgatgcagattaacctgactggattcttgaatggaaaaaatgctagagaa
tttatgggagagttgtggcccctattgttgagcgcacaggaaaacattgctgggatccct
tctgctttcttggaactgaagaaggaagaaataaaacaaagacagattgaacaagaaaaa
ctcgcatcgatgaagaaacaagatgaagacaaagataagagggacaaggaagaaaaggag
agcagcagagaaaaaagggaacgatctagaagccccagaagacgcaagtccagatctcct
tcccccagaagacgagcctcccctgtccgacgagagagaaagcgaagtcattctcgatct
cctcgtcatagaaccaagagccgaagcccttcccctgctccagaaaagaaagaagaaatc
ccagaacttccagaaccttccgtgaaagccaaggaaccttcaatacaagaggcaacctct
acaagtgacattctgaaagctcccaaacctgaacctataccagaaccgaaggaaccttca
ccagaaaaaaattcaaaaaaggaaaaagaaaaggagaaaacccgcccaaggtctcgatca
cgatccaaatcgagatcacgaacacgttcccgatccccttctcatactcgacctagacga
cgtcatagaacacggtcgaggtcatattcacctagaagacgtccaagtccaagaaggcgg
ccatctcctcgacgaagaaccccgccaagacgaatgcctcctccaccaaggcatagaaga
agtcgatctcctgtgagacgaaggcggcgctcatcagcatctctctctggcagcagctca
tcatcatcatcttcccggtcccggtcacctccaaagaagccacccaaaagaatctccagc
ccccctagaaaaactcgtagactctctccatcttcaagtcctccacggcgaagacatcgg
ccatctccgccagcaagcccaccgccaaaaacccgtcggtcaccaacaccccagcagtca
aatcgtacaaggaaaagtcgtggctctgtttctccagggagaacctcaggtaaagcaaca
aaacataaaggtaccgagaaaagggagtcaccttcaccagcaccaaaacctcggaaagta
gagttatccgaatcggaagaagacaaaggtggcaaaatggcagcagcggattccgtgcaa
cagaggcggcaataccggagacagaaccagcagtcttcttctgactctggctcctcctcc
tcctcagaagacgaacgaccgaagagatcaaacgtgaaaaatggagaagtgggaagacgt
cgacgacattcggcctcccggagtgcatccccatcaccacggaaacgccagaaagagtcc
tctcctcggatgcagatgggaaagagatggcaatcgccaatgattaaaagtagtaggcgg
agaagaagtccgtcacctccaccggctagacgacgacgttccccatctccggcccctcca
ccccggcggcggcggtctcccacaccaccacctccaccaccacggcgcaggactccttct
cctcccccacgtcgacgttcaccttctccaagaagatattctcctccaatacagagaaga
tactctccttccccgcctcctaagagaagaacggcttccccaccaccacctcccaagcga
agggcatcaccttcgcctcccccaaagcgacgggtctcccattctccacctccgaagcca
agaagttcccctgttacaaagagacgttccccttccttatcttctaagcataggaaaggg
tccccccctagccgatccacccgagaaacccggtctcctctaccaaacaaacggcattca
ccttcaccacggcctcgagttcctcatacctctgcaagtcctaccccactccgaagagga
gcttcatcttcaccccaaagaaggcagtccccatcaccaagcactaggcctatcaggaga
gtctccagaaccccagagcccagaaaagcaaaaaaggctgcctcaccaagtccccagtct
gtaagaagggtctcatcctccagatctgcctccagatctcctgagccagcagctaagaaa
caccaagcacctccatcccccacccagtctcaatccccatccacgaactggtcgccagca
gcacctgtcaagaaggctaaaagccccacgccaagcccatcccctgccaggaattcagac
caggagggtggtgggaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggacaag
aagcacaaaaaacacaaaaaacataagaaggagaaggcggcagctgccgccgctgctgcc
gtagcatccaccaccacatcagcccaggaagagcctgaagcagagacagagcccaaaaag
gagaccgagagcgaagctgaagacaacctggatgatctagagaaacaccttcgggaaaag
gcgctgaggtcgatgagaaaggcgcaagtgtccccacagtcctag
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