Antechinus flavipes (yellow-footed antechinus): 127555811
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Entry
127555811 CDS
T08818
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afz03037
]
127555811
Cilium and associated proteins [BR:
afz03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127555811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CENP-F_leu_zip
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
127555811
NCBI-ProteinID:
XP_051844382
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All DBs
Position
3:complement(589032290..589115522)
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AA seq
2070 aa
AA seq
DB search
MSSRDEGPPVAAPKLESVIQKLENSLLNSEEEKGLAVQDPAQDIGPARLPACIREIVTRN
FAEPENPEAAQTPEMASLLTLQEENRILQQELSRIEDLLAQSRAERDELAIKYNAISERL
EQSLRLESGEREPLGYGVLGQQTLELRRQLEEEQANYKRKLQAYQDGQQRQAQLVQKLQA
KVLQYKKKCGEVEQQLLEKTAELEQQKLAQEEEHSQDLENALIRLEEEQKRSASLVQVNA
MLREQLDQASAANQALTDDIRKVTHDWTRSRGELEQREAEWRREEESFNAYFSNEHSRLL
LLWRQVVGFRRLVSEMKTSTERDLAQLGIELARTSRSIHSASVGLSGSLRLAESSSEAAM
EKAALLRAQLEEQLRDKVRDMIQLQVKSDLEKAELNSRVNELTLLVEQLQSQNSEKDRAN
EALTQKVEALEAVRLQEQAAIEAEEVEALRNESEVLQQTLRDLAQAVLSDTDSGIQMGGM
ERTPEASDGSLRGLSSLRTPSPLRRSSPRPSGSPRPSLSPAFSDSTLALVHSALHKRQMQ
VQDMRGRYEASQDLLASLRKQLADGEAERRSLDKQVLQLRDAADGAVQAKEDALRDIQRL
RSAHDLLSSEKDGLVRSLAAMQMQVEMLQQEKEKLQLTQDELQRQKDQLEEEKEDITQDR
ERFHKEIERGHKQLEQLEVKKSGLMKELILAKETLSKATLAKEVMEAEKTEVTEALTKVE
ANRAELELSINKLKGEEASLRDSLSKLSALNEGLAQDKRELNQLVSQLEEERGILLGQKR
DAEQEKAAAQEQVAQLEQEKLVQEAERQNLERSLQAAELAREALEQQLPAFQKERGQLQD
QLAQLSRQLGAQQEELQRVHRDGERHSEGLERAFREMESLTKERASLLVQLTASERENRS
LTEEVAGLRSEKDTLETSLFEAHRQLSQMEARREQLEADVQGLLLAKETLTGQLVGLRRQ
METEVQKLVRDKELLAQQLVQVEQEAQATLRGEQAAHDEDVERLRQEKEAARRELEAERT
ELLHRLSQEREELLARLEAEKEELSEEITALQQDRDESLLLAENEKQQALSLKESEKTAL
SEKLLGTQQSLATMSMDLERQKRDALTRQEQDRSTVNALTSELRDLRAKFEEAINNHERE
VKALQEQARDLGRQRESCLREADELRTQLRLLEDSRDGLRRELLEAQRKVREGQEGREAQ
RQETLELRRSLGDSTKEREALRRSNEELRAAVKKAESERISLKLANEDKEQKLALLEEAR
AASGREAGELRAGLQEVERSRLEARRELQELRRQMKLLDSDNAKKTQELVELQGRVALSQ
QLEKEARREAFGLKQKVLKGEVALDGTKQELLSVQRRLLEVEQGFQTRERGLLGSLEESR
GSEKKLLDNARNLELKLERTQAEAGELGLRLSAAEGRMQGLEMELARVEGQRREAEFQLS
SLRSALRRTLGIGRVPSPAFRGYANSPKRIPSPARGSGESPPEGSSCSSSPERTRHSCAT
SPEPMASPPPPTMDLDAETVRAALRQFLKELQDAQRERDELRVRVSTLNRQLADSERARD
TANTHVEQLQKLVVECEEGRRGADGRLSGAQAALVLREESVRRSERERRAALDQVATLER
SLQAAENERRASQEKISKMKANEAKLESDKRRLKEILDASESRATKLELLRHSLEGELQR
SRLGMGDRESQAQALRDRTENLERQLADSELKAGALQLTVDRLNIALAKAEDSEAALKEK
VQGLTASLAESSRSVTSAQDKNLHLQKSLTACEHDRRVLQERLDVARQATAEAKKQSSSL
GEQVQTLRSERTELELQKADLEGQVQQLQELLDQRQESETTALQGLQKVKDEKQQLQECL
ASLQKSLAQLEGEKREAERSALRLEKDRAALKRTLDKLECPVGGLKPRADWAEGTELFVG
VTRASEDPSSLEMWISRQVEREKLRSHEDSIRLNHEKGLLDRSLTGAEQELTEAQKQIHQ
LEAQLMEMEQGQCLLETGGQTQLELQQELERLRGAQAQAERTMEARERVHRQRIRGLEEH
ISTLKERLQQELRRVPQGFSPSSSSAPSGN
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggatgaggggccaccggtggctgccccaaagttggagtcagtcatccag
aaactggaaaacagcctcctgaactcggaggaggaaaagggcctggcagtgcaggaccca
gcccaggacatagggcccgcccgcctgcctgcctgcatccgggagattgttactcggaac
tttgctgagccggagaacccagaggctgctcagaccccagagatggcgtccctgctgacc
ctccaggaagaaaaccgcattctgcagcaggagctatcgcgcatcgaggacctattggcc
cagagccgggcagagcgggatgagctggccataaaatacaatgctatcagcgagcggctg
gagcagagccttcggctggagtccggggagcgggagcccttggggtacggggtgctgggc
cagcagaccttggagctgcgacgccagcttgaggaagaacaggccaactacaagcgcaaa
ctccaagcctaccaggacgggcagcagcgccaggcccagctggtgcagaagctacaggcc
aaggttctccaatacaagaagaaatgtggagaagtggagcagcagcttctggaaaaaact
gccgagctggagcagcagaagttagcgcaggaggaagaacacagtcaggacctggagaat
gctctcatccggctggaagaggagcagaagaggagtgccagcctggtgcaggtgaacgcc
atgcttcgagaacagctcgaccaggccagcgcagccaaccaagccctgaccgatgacatc
cgcaaagtgacccacgactggacccggagtcggggggagctggagcagcgagaggccgag
tggcggcgggaggaggagtctttcaatgcctacttcagcaatgaacacagccgtctgctc
cttctctggaggcaggtagtgggcttcaggaggctggtcagtgagatgaagacttccacg
gagagggacttggcccagctgggcatcgagctggcccggacctcgcggagcatccactcg
gccagcgtgggcctgagcgggagcctgcggctggcggagagcagcagcgaggccgccatg
gagaaggcagccctgctccgggcccagctggaggagcagctgcgcgacaaggtgcgcgac
atgatccagctccaagtgaagagcgacctggagaaagccgagctcaactccagagtgaac
gagctgaccctgttggtggagcagcttcagagccaaaactcggagaaggaccgcgccaac
gaggccctgacgcagaaggtggaagcgctggaagctgtgcggctccaggagcaggcggcc
atcgaggctgaggaggtggaggccctgaggaatgagtccgaagtgctacagcaaaccctg
cgggacctggcccaggccgtcctgtccgacacggacagcggcatccagatgggcggcatg
gagcgcacccccgaggcctccgacggcagcctgcgcgggctctccagcctgcgcaccccc
tccccgctccggcgctcctcgccgcgccccagcggctccccccgccccagcctgtccccg
gccttctccgactccaccctcgccttggtccactcggccctgcacaagcgacagatgcaa
gtgcaggacatgcgtgggcgctacgaggccagccaggaccttctggcctccctgcggaag
cagctggccgacggcgaagccgagcgccggagcctggacaagcaggtgctgcagctccgg
gacgcggccgacggggccgtccaggccaaagaggacgcccttcgagacatccagaggctg
cgcagtgcccacgacctgctgagcagcgagaaggacggcctggtgcgcagtctggcggcc
atgcagatgcaggtggagatgctgcagcaagagaaggaaaagctgcagctgacccaggat
gaactgcagagacagaaggaccagctggaggaggagaaggaggacatcacgcaggataga
gagagattccacaaggaaatagagcggggtcataaacagctggagcaactggaggtgaag
aagtcaggactgatgaaggagctgatcttggctaaggagaccctaagcaaggccactttg
gcaaaggaagtgatggaggccgagaagaccgaggtgacggaggcgctgaccaaggtggaa
gccaacagagctgagctggagctatccataaacaaactgaagggagaggaagcatctctg
agggattctttgtccaaacttagtgccctcaacgagggtttggctcaggacaaacgggaa
ctgaaccaattggtctctcagcttgaagaagaacggggaatcctgcttgggcagaagcga
gacgcagagcaggagaaggcggctgcccaggagcaagtggcccagctggaacaggagaag
ctggtacaggaggcggagaggcagaacctggaacgctccctgcaggccgctgaactggcc
cgggaggccctggagcagcagctgcctgcctttcagaaggagcgtggccagctccaagat
cagctggcacagttgtcgaggcagttgggagctcagcaggaggaacttcagagagttcac
cgagatggggaacggcactcggaggggctggagcgggctttccgggagatggagtcactg
accaaggagcgggccagcctgctggtgcagctgaccgcctccgaacgggagaaccgctcc
ctgactgaggaggtggctggcctccgctcagagaaggacaccctcgagaccagcctgttt
gaggcccaccgacagctcagccagatggaggcacgcagggagcagctggaggcggatgtg
caggggctgctgctggctaaggagactctgactgggcaactcgtgggtcttcgacggcag
atggagacagaggtgcagaaactcgtgcgggacaaggagctgctagcccagcagctggtc
caggtggagcaggaggcccaggccacccttcgaggagaacaggcagcccatgacgaggat
gtagagcggctgcgtcaggagaaggaggcggcccgccgagagctggaagcggaacgcacg
gagcttctgcaccggctgagccaggagcgggaggagctcttggcccggctggaagcggag
aaggaggagctgagcgaggagatcacggcgctgcagcaggaccgggatgagagcctcctg
ctggccgaaaatgagaagcagcaggccctgtctctgaaggagtccgagaagacagcgctg
tccgagaagctcttgggcacccagcagagcctggccaccatgtccatggacttggagcgg
cagaagcgagacgccctgacccgccaggaacaggaccggagcactgtgaatgccctgacc
tcagagctgcgggacctccgggccaagtttgaggaggccatcaacaaccacgagcgggaa
gtgaaggcgctgcaggagcaggcccgggacctgggccgacagcgggagtcctgcctccga
gaggctgatgagttgagaacccagctccggttattggaggattcccgggacgggcttcgg
agggagctgctggaggcccaacggaaggtccgggagggccaggaagggcgggaagcccag
cgccaagagacccttgagctgcgccgcagcctgggggacagcaccaaagagcgagaggcc
ctgagacgctccaacgaggagctgagagccgccgtcaagaaggcagagagtgagcgcatc
agtttgaagctcgccaacgaggacaaggagcagaaactggcgctgctggaagaggctcgg
gcggcctcgggcagggaggccggagagctgagggcagggctgcaggaggtcgagcgctca
aggcttgaagcccggcgggagctacaggagctcaggcgccagatgaagctgctggacagt
gataacgccaagaagacccaggagctggtggagctgcagggccgggtagctctgagccag
cagctggagaaggaggcccggagggaggcctttggtctcaagcagaaagttctaaaagga
gaggtcgccttggatgggaccaagcaagagctcctttctgttcagaggagacttttggag
gtggagcagggattccagacccgggagcgagggctcctgggctccctggaggagtctcgg
ggctcagagaagaagcttttggataatgctcggaatctggagctgaagctagagaggaca
caggctgaagctggggagctgggactccgactgagcgctgctgagggccggatgcagggc
ctcgagatggagctggcccgagtggaagggcagcggcgggaggctgaattccagctgagc
agcctgcgctcagccctgcgtcgcaccctgggcataggaagggtacccagtcctgctttc
cgaggctacgctaattccccgaagaggatcccttctcctgcaagaggaagcggggaatcc
cctccggagggctccagctgctccagttcccctgaacgcacccgccactcctgcgccacg
tccccagagcccatggcttcgcccccgcctcccaccatggacctggatgctgagacagtg
cgggctgccctccggcagttcctgaaggagcttcaggatgcccagcgggaacgggatgag
ctacgagttcgagtgagcactctgaaccgacagctggccgactcggaaagagcgagagac
acggccaacacccacgtggagcagctgcagaagctggtggtagagtgtgaggaagggcgt
cgtggggccgatgggcggctgagtggggcccaggcagcgctggtccttcgggaggagagc
gtccggcggagcgagcgagagcgtcgggctgcgcttgaccaggtggccaccctggagagg
agcctgcaggcggctgagaacgagcgacgggccagccaggagaagatcagtaagatgaaa
gccaatgaagccaagctggagagtgacaaacggaggctaaaagagatcctggatgcctca
gagagccgagccaccaaactggagctgcttcgacactcactggagggtgaactgcagcgg
agccggctgggcatgggggaccgggagtcccaggcccaggctctccgagatcggacagag
aacttagagagacagctggcagacagtgagctgaaggccggggccctgcagctgactgtg
gataggctgaacatcgccctggcaaaggcggaggatagcgaggcggctctgaaggagaag
gtgcagggcctgacggcgtctctggcagagagcagccgctctgtgacctcagcccaggat
aaaaacctgcatctccagaagtccctgacagcctgcgaacatgaccgcagggtcctccag
gagcgtttagatgtggcccgccaggccacggcggaggccaagaagcagagcagctccctg
ggggagcaggtccagaccttgcgcagcgagcgcactgagttggagctccaaaaggccgac
ctcgagggtcaggtgcagcagctacaagagctgctggaccagcggcaggagagtgagacc
actgctctgcagggcctgcagaaggtgaaggatgagaagcagcagcttcaggagtgcctg
gccagcctgcagaagtccctggcccagctggagggggagaagcgggaggccgagcgttcg
gccctgcggctcgagaaggatcgggctgccctcaagaggactctggacaagttggagtgt
ccagttggaggactgaagcccagggcagactgggccgagggtacagagctcttcgtaggg
gtgaccagagcttctgaggacccttccagcttggagatgtggatttcccggcaggtggag
cgcgagaagctgcgcagccatgaagattccatccggttgaatcacgagaagggcctcctg
gaccgctcactcactggggccgagcaggagctcacagaggcccagaagcagatccaccag
ctggaggcccagctgatggagatggagcagggccagtgcctgctggagacagggggacag
acccagctggagctgcagcaggagttagagcggctgcgaggggcccaggcccaggccgag
aggaccatggaggcgcgggagcgcgttcaccgccagcgtattcgtgggctcgaggagcac
atctccaccctgaaggaacggctgcagcaggaacttcgcagagtccctcagggcttctct
ccatcttcatcctccgccccctctggaaactga
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integrated database retrieval system
