Antechinus flavipes (yellow-footed antechinus): 127555878
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Entry
127555878 CDS
T08818
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127555878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555878
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127555878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
127555878
NCBI-ProteinID:
XP_051844525
LinkDB
All DBs
Position
3:594736637..594781429
Genome browser
AA seq
909 aa
AA seq
DB search
MRSHAVLSREDLWGWRGKKMAAPSIGGTRPVPEAAATATAAAAEPSGMTVLPGFKDADSF
VKFALGSVLAATKASNGLPQAGDEYDFYRSFPGFRAFCETQGERLLQCMSKVMQYQGCRS
HIKDRSKVTELEDKFDLLVDSNDVILERVGILLDEASGVNKNQQPILPAGMQVPKTIVSS
WNRKAGEYNRKRQSETFRLLHAKNIIRPQLKFREKVDNSNTPFVPKIFIKPNAQKPLAQA
LTKERRERQERPEDLDVPPALADFLYQQRTQQIEQDMFAHPYQYELDHFTPPDAVLQKPQ
IQMYRSVEETPCHFVSTLDELVELNEKLLSCKDFGVDLEHHSYRSFLGLTCLMQISTRTE
DFIIDTLELRCDLYILNESFTDPAIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARIL
NLGRHSLDHLLKLYCNVETNKQYQLADWRIRPLPEEMFNYARHDTHYLLYIYDKMRSDLW
ERANGQPAQLQVVWQRSKDICLKKFIKPIFTEDSYLELYRKQKKHLNTQQLTAFQLLYSW
RDRTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQA
REMPLLKSEVASGVKKSKSQPAPERIENALFGPHDYSRAPPDDYLNVVAAGPGPLQKSPT
LFSDKNENETLSDPGCFVATAVITLFNEPSAEEESGRKLTAAQQRAQRIMESFENPFRMY
LPAEENRAYISQSAKYDPMSKIYEISNRWKLASQGQIKKEAQETSRKKAEQTAAREQAKA
EYKATAQQVISVREQASLENATKKRERMGSEPGSLEPKHETKRLKVSQQPQEQEPPKEFT
PYDYSKSDFKAFAANNKPKQSSQFDPNLQDPPGKKCAAVGKPKLPAGNRSKSFVSGKSDR
GFRYSWPKR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcacgcggtcctctcgcgagaagacctctgggggtggaggggcaagaagatg
gctgctcccagcattggaggaactagacctgtgcctgaggcagcggccacggcgaccgcg
gcggcggctgagcctagcgggatgacggtgctgccggggttcaaggacgcggacagcttc
gtaaagtttgctcttggttctgtgctggctgctacaaaagcttctaatggactgccacag
gctggagatgaatatgatttttaccgaagctttcctggcttccgagcattttgtgaaaca
caaggagagaggttgcttcaatgtatgagtaaagtcatgcagtaccaaggctgtcgtagc
cacattaaggatcggagtaaagtgactgaattggaggacaagtttgatttgctggttgat
tccaatgatgtcattcttgaaagagtgggtattctcttggatgaagcatcaggagtaaac
aagaatcagcagcctatcctgcctgcaggaatgcaggtccctaaaacaattgtgtccagc
tggaaccgtaaggcaggagagtataacaggaaaagacagtctgaaactttccgactactt
catgccaagaacatcattagacctcagctaaagtttcgagaaaaagtcgataattccaat
acaccatttgtccccaaaatcttcatcaagcccaatgcacagaaacctctagctcaggca
ctcaccaaagagagacgtgagcgacaggaacgccctgaagacttggatgtgccacctgcc
ttagcagattttctctatcagcagagaactcagcagattgagcaggatatgtttgctcat
ccctatcagtatgaactggatcatttcactccaccagatgctgtcctgcagaagccacag
attcagatgtacagatctgtagaagaaacaccctgccattttgtctctaccctcgatgaa
cttgtggaacttaatgaaaaactcctgagttgtaaagactttggtgttgatttggagcac
cattcttacaggagtttcctgggtttgacgtgcctaatgcagatttctacccgaacagag
gacttcattattgataccctggaacttcgatgtgacctgtatattctcaatgaaagtttc
acagatccagccatcgttaaggtcttccatggtgctgatatggacattgaatggctgcag
aaagactttgggctgtatgtggtgaacatgtttgatactcaccaagcagctcgcatcctt
aaccttggcaggcactcactggatcacttactgaaactctattgcaatgtggaaacaaac
aagcagtatcagttggctgactggaggatacgacctttaccagaggaaatgtttaactac
gcccgccatgatactcattacctcctctacatttatgataagatgcgttcagacctgtgg
gaacgagcaaatgggcagccagctcagctacaggtggtgtggcagcggagcaaggacatt
tgcctcaagaaattcatcaaaccaattttcactgaagattcataccttgagctgtataga
aagcagaagaagcaccttaatacccagcagctcacagcctttcagttgctctattcttgg
agagacagaacagcccggagggaagatgaaagttatggctatgtcctgcccaaccacatg
atgctgaagatagccgaggaactccccaaggaacctcagggtatcattgcttgctgcaac
cctgtacctcctcttgtgcgacagcaaatcaatgaaatgcaccttctaatccagcaggcc
cgagagatgcctctgctcaagtctgaagttgcatctggagtgaagaagagcaaatcccag
cctgctcctgagagaatagaaaatgctttatttggacctcatgactattcccgtgctcct
ccagatgattatctaaatgttgtagcggcaggacctgggccacttcaaaaaagcccaacc
ctcttctctgacaaaaatgaaaatgagaccttatcagaccctggctgctttgttgctact
gcagttatcacattattcaatgagcctagtgctgaggaagagagtggaaggaagctaacc
gcagcccagcagagggcgcagagaatcatggagtcctttgaaaatccattcaggatgtat
ctgcccgcagaagagaatcgagcctacatctcacagtcagccaagtatgatccaatgtca
aagatctatgaaatcagcaatcgttggaagctggcaagccagggacagatcaaaaaagaa
gcccaagaaacatcaagaaagaaagcggagcagacagctgcccgagagcaggcaaaggca
gagtacaaagccaccgcccagcaggtcatctcggtccgggagcaggcttcgctagaaaat
gctaccaagaagcgggagaggatgggaagtgagccaggaagcctggaacccaagcacgag
acaaagaggctcaaagtttcccagcagcctcaagagcaagagccacccaaagagtttacc
ccgtacgactacagcaagtcagacttcaaagcctttgctgcaaacaacaaacccaaacag
tcatctcagtttgatccaaatttgcaggacccacctggcaagaaatgtgctgcagttggc
aagcccaagctgccagcaggaaacagaagcaaatctttcgtatctggaaaatcagataga
ggcttcaggtacagctggccaaagagatag
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