Antechinus flavipes (yellow-footed antechinus): 127555893
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Entry
127555893 CDS
T08818
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
afz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127555893
04120 Ubiquitin mediated proteolysis
127555893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127555893
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127555893
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
U-box type E3
127555893
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127555893
NCBI-ProteinID:
XP_051844560
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All DBs
Position
3:complement(595814376..595948688)
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AA seq
1354 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPVAAPAPGPSHNLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRTLSDKELSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLSAGSNPGTSPMFCNVGSFSASSMSSLYDTSPTPNTPFSSYVPVTSSSCTSPSNAA
APISVPSISLSPHIPGESPSGSQASSPRYRPYTVAPPWGFSTSPTLRSSSLSALSSSPSP
PALSTSPSRQRPTAMGPPLFPASPGPTSRRPSALRIPSSTYDHPFSFLFLALSDMSGDSS
DEENEDDDGDDEDEDEGGGDDDFTCVQFGSSLGASGGASASDSCSDHFTIEMCKETDMLN
YLIECFDRVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGSLTQPRSMQQQSLL
VPYMLCRNLPFGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMAL
GELCEIKFGKTHPICSLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSLSVFAEDDVKVV
EKYFSGPAITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAIVNAN
MKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETIDPTYIFHPRCRIVLPSDETRVK
ATMEEVTSWMTELYGDQSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNR
TVEDLKNNENQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYG
SVIQLLLRILDPAYPHITLPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCT
QDIAMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVP
SLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYIN
MLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLA
LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP
KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVILKMRKAGIKSTIAIEKFKLLA
EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTD
PFNRQMLTESMLEPVPELKEQIQTWMREKQNTDH
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgctcggctggccggtgga
cagacttctcagccctctaccccactcacctctccacagagagaaaacccacccggtcct
cctgtagcagcaccagccccaggcccttcccataatcttggtctaaatgtccacaacatg
accccagctacctccccaataggtgcatcaggagtcgcgcatcgaagccagagcagtgaa
ggagtcagttcgctcagcagttcaccttctaatagccttgaaacacagtcgcagtctctc
tcacggtcccagagcatggatatcgacagtgtctcctgtgagaaaagcatgtcccaggtg
gatgtagattcaggaattgaaaacatggaggttgatgaaaatgatcgcagagaaaaaagg
actctctctgataaggaactttcatcaggttctgaggtctcagaagaacaggccttacag
ctggtctgtaagatctttcgtgtctcttggaaagaccgggacagagatgtcatttttttg
acttcactttctgcgcaatttaagcagaacccaaaagaagtgttctctgattttaaggat
ttgattggccagattttaatggaagtgctaatgatgtccactcaaactagagacgagaat
ccttttgccagtctgacggcgacttcccagccgattgcaactgcagctcgatcaccggac
agaaacctgatgcttagtgcaggatctaatccaggaacgagtcccatgttttgcaatgtg
ggttccttcagtgccagctcaatgtccagcctctatgacactagtccaactcccaatacc
cctttctcaagctatgtgccagtgacgagctcctcttgtacctcaccttccaatgcagcc
gctccgatatctgtgccttccatttcgctcagtcctcatattccaggagaaagcccttca
ggaagccaggcttcgtctccgaggtatcgcccttacactgtggcccctccctggggcttt
tcgacttctcccaccctgcggtcctcgagtctctccgctttgtctagctcaccaagcccg
cctgccctgtcgaccagtccttccagacaaagacccacagccatgggcccacctttgttt
cctgcttctccaggtcccacgagcaggcgtccctctgccctaaggattccttctagtaca
tacgaccatcctttctccttcctcttcctcgcactttctgatatgtctggggacagtagt
gatgaagaaaatgaagatgatgatggtgatgatgaggatgaggatgaaggtggtggtgat
gatgattttacttgtgtccagtttgggtccagtttgggagcctctggtggggcgagcgct
tctgattcctgcagtgaccatttcaccattgaaatgtgcaaggagacagatatgctgaac
tacctcatcgaatgttttgacagagttggaatagaggaaagaaaagcaccaaagatgtgc
agccaaccggcggtcagccaattactgagcaacatccgctcccagtgcatatcccatgct
gcgttagtgttacaaggctcattaacgcaaccaaggtccatgcagcagcagtctctcttg
gtaccctatatgctgtgtaggaacctcccatttggtttcatccaagagctggtgagaaca
acccaccaggatgaagaagtgttcaaacagatctttatccctattttacaaggtttggct
cttgctgccaaagagtgctcccttgatagtgactactttaaatatccccttatggcatta
ggtgaactctgtgaaattaagtttgggaaaacccatcctatttgtagtttggtcgcctct
ttgcctttgtggctgccgaagtccttaagcccaggttccgggcgggagttgcaaagactc
tcttatttgggggccttcttcagtctctctgtctttgctgaggatgatgtaaaagtggtt
gaaaagtatttctcagggcctgccattaccctagagaatacccgagtggtcagccagtca
ctacagcattatttggagtcagccagacaagaattgttcaagatcctacatagtattttg
ctcaatggtgaaactcgtgaggcagctctcagttacatggcagctattgtcaatgccaac
atgaaaaaagcgcagatgcagacagatgatcggttggtgtctacagatgggtttatgctt
aatttcctttgggtgctgcagcagttaagcacaaagattaagctagaaacgatagatccc
acttatatattccatccacggtgtcgtattgttcttccaagtgatgagacacgagtgaaa
gcaacaatggaggaggttactagttggatgactgaactttatggagatcagtctccattt
tctgagccgaaattccctacagaatgcttctttcttacgctacacgcccaccacctctct
attttgccaagctgtcgtcgttatatacgcagactccgggccatcagggagcttaacaga
actgtggaagatcttaaaaataatgaaaatcaatggaaagattcccctctggcaactaga
catcgggaaatgctgaaacgttgcaaaactcaactcaagaaattggtgcgatgcaaagcc
tgtgctgacgcaggtttgctggatgaaaacttcctgcgaagatgtctgaatttctatggc
agcgtaatccagctactgctgcgcatccttgaccccgcctatcctcatatcacactgcct
ttaaatccagatgtccctaaggtgtttgcagcattgcctgagttttacgtggaagatgtt
gctgaatttttattttttattgtacaatactcacctcaggtgctgtatgagccctgtact
caggatatcgccatgttccttgttgtgatgctctgcaaccagaactacattcggaatcca
tacctggtggccaaattggtggaagttatgttcatgaccaacccttctgtccagccacgg
actcagaagttttttgaaatgatagagaatcatcctctttccaccaagctgttagtcccc
tcactgatgaagttttatacagatgttgagcatactggagccaccagcgagttctatgac
aaattcacaatccgctatcatatcagcaccatttttaaaagtctttggcaaaatatagcc
catcatggcacctttatggaagagttcaattctgggaagcagtttgttcggtacataaac
atgctgataaatgacacaacctttttgttggatgagagtctggagtccttgaagcggatc
catgaagtgcaagaagaaatgaagaacaaggaacagtgggacctgttgccccgggaccag
cagcaggctcgtcagtctcaacttgctcaggacgagcgtgtgtctcgctcttaccttgca
ctagcaacagaaacagtggatatgtttcatattctcaccaagcaagtccagaagcctttc
ctcagacctgaacttggaccacgcttggctgctatgctgaattttaatcttcagcaatta
tgtggccccaagtgccgtgacctgaaagtggaaaaccctgagaaatatgggtttgaacca
aagaagctcttggaccaattgacagatatttacttgcagctagactgtgcccgttttgct
aaggctattgctgatgaccagagatcatatagcaaggaactatttgaagaggtgattttg
aagatgcgcaaagcaggaataaagtccacaatagcgatagagaagtttaagctgctggca
gaaaaggtggaggaaatagtagccaagaatgcccgggccgaaattgattacagtgatgct
ccagatgaattcagagaccctttaatggacaccctaatgactgaccctgtgagattgccc
tctggcaccatcatggaccgttcgatcattcttcggcacctgctgaattcacccactgat
cccttcaatcgacagatgctgacagagagcatgctggagccagtgccagaattgaaagaa
caaatacaaacctggatgagagaaaaacagaacactgatcattag
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