Antechinus flavipes (yellow-footed antechinus): 127555897
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Entry
127555897 CDS
T08818
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127555897
Cell adhesion molecules [BR:
afz04515
]
Cadherins
Cadherin related
127555897
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
127555897
NCBI-ProteinID:
XP_051844566
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All DBs
Position
3:596233070..596330900
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AA seq
984 aa
AA seq
DB search
MLPEPPQPQPHRRRCSPPAASAWLVTAAALLGLCGGGWAARVNKHKPWIETTYHGIVTEN
DNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCE
LQKDYTFTIQAYDCGKGPDGANTKKSHKATVHIQVNDVNEYAPIFKEKSYKATVIEGKKY
DNILKVEAVDADCSPQFSQICSYEIVTPDVPFIVDKDGYIKNTEKLSYGKEPQYKLTVTA
YDCGKKRATEDVLVKISVKPTCKPGWQGWNKRIEYEPGTGSLALFPNIHLETCDEAVTSI
QATVELETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPPPSSALNWTVGLPTDNGHDS
DQVFEFNGTQAVKIPEGVVTVNLKEPFMISVWMRHGPGGREKETILCNSDKTDMNRHHYS
LYVHNCRLVFLFRQDPSEEKNYKPAEFHWKLNQVCDKEWHHYVLNVEFPSVTLYVDGVSY
DPFPVTEDYPLHPSKIETQLVVGACWQEYSGNENDNETETEAVTVSSAGGELHMAQFFRG
NLAGLMIRSGKLENKKVIDCLYTCKEGLDLQVTESKGMKIQANPSQSVLTLEGDDVEQFD
KAMQHISYLNSRQFPTPGIRRLQITSTVKCFNEEACMSIPLVDGYVMVLQPEEPKISLSG
INHFARAASEFESAEGVSLFPELRIISTITREVEQDTDGDEDPTVQESLVSEEIMHNLDT
CEITVLGEELNADQESLEVDVARLQQKGIETSSSNLGVIITGVDTMASYEEVLHLVRYRN
WHASTAVLDRKFKLVCSELNGRYVSNEFKVEVSVIHTANPVEHANHIAAQPQFVHPVHHS
FVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKE
NEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEG
EPEEDQQNVNRQQQLEWDDSTLSY
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggagccgccacagccgcagccgcaccgccgccgctgctccccgcccgccgcc
tccgcctggctcgtgacggccgccgcgctgcttgggctctgcggcgggggctgggcggcg
cgagttaacaagcacaaaccctggattgaaacgacatatcatggtatagtcacagaaaat
gacaacacagtcctcttggatccccctttgatcgccttggataaagatgcacctctgcgc
tttgcaggtgagatatgtggatttaaaattcacgggcaaaatgtcccctttgatgctgtg
gtagttgataaatccactggtgagggaataattcgctccaaagagaaactggactgtgaa
ctccagaaagactacaccttcaccatccaggcctatgattgtgggaagggaccagatgga
gccaatacgaaaaaatctcacaaagcaacagtccatattcaggtgaatgatgtaaatgaa
tatgcccctatatttaaagaaaaatcctacaaagctacagttattgaggggaagaaatat
gacaacattttaaaagtggaagcagtggacgcagactgttcccctcagttcagccagatc
tgcagctatgaaattgtgactccagatgtgcccttcattgttgacaaggatggttatata
aaaaacactgagaaactaagttatgggaaagagcctcagtataagctcacagttactgcg
tatgactgtgggaagaaaagagctacagaagatgtgttggtcaagattagtgtgaaaccc
acgtgcaagcctggctggcaaggatggaacaagaggattgagtatgagccaggtaccggg
tctttggctctcttccccaacatccatttggagacttgtgatgaagctgtcacctccatc
caggcaacagtggagctagagacgagccacatcggcaagggctgtgatcgggacacgtac
tcggagaagtccctgcaccggctctgcggtgcagcttccggtactgctgaacttcttcct
cctccaagcagcgccttgaactggactgtgggcctccccaccgataatggccatgacagc
gatcaggtctttgaatttaatggcactcaagccgtgaagattccagagggggttgtgaca
gtaaatctgaaagagccttttatgatttctgtgtggatgaggcatggcccagggggcagg
gagaaggaaaccattctttgcaattcagataagacagatatgaatcggcatcattattcc
ctctatgtacataattgccgactggtttttctcttccgtcaagacccttcagaggagaag
aattataaacctgctgaattccactggaaattgaaccaggtgtgcgacaaggaatggcat
cattatgttctcaatgtggaattccccagcgttactctgtatgtcgatggtgtttcctat
gatccctttccagtgactgaagattaccctcttcacccttccaagatagaaactcagctg
gtggtcggagcatgttggcaagagtattcaggaaatgaaaatgacaatgagactgaaact
gaggcagtgactgtgagctctgcaggtggcgagctacacatggctcagttttttcgaggt
aatctggctggcttaatgattcgctctgggaaactggaaaacaagaaggtgatagattgt
ctgtatacctgcaaggaagggctcgatttgcaagtgactgagagcaaaggcatgaagatt
caagcaaaccccagccagtcggtgctgactttggaaggagatgacgtagaacagtttgat
aaggccatgcagcacatttcctacctgaattctcgacagttccccacaccgggaatccgc
aggctccagatcaccagcactgtcaaatgcttcaacgaagaagcttgtatgtcaatccct
ctggtggatggctacgtgatggtcttacagccagaggagcccaaaataagcttgagtggt
attaaccattttgctcgggcagcttcagaatttgaaagtgcagagggagtctccctgttc
ccggagcttcgaatcatcagcaccatcacccgggaagtagaacaggacaccgatggtgat
gaggatcccacagtccaagagtccttggtgtcggaggaaatcatgcacaatctggacacg
tgtgagatcacggtgctgggcgaggagctcaacgcagaccaggaaagtctggaggtggac
gtggctcgtctgcagcagaagggcattgagacgagtagctccaacctgggcgtcatcatc
acaggtgtggacaccatggccagctatgaggaggtgctgcaccttgtgcgctaccgcaac
tggcacgcctccaccgcggtgctggacaggaagttcaagctggtgtgctcggagctgaac
ggacgctacgtcagcaacgaatttaaggtggaggtgagcgtcatccacacggccaaccca
gtggaacacgcgaaccacattgcggcccagcctcagtttgtccatcccgtgcatcattcc
ttcgtcgatctgtctggccacaatctggctaatccccaccccttttcagttgtccccagt
acggcaactgtggtgattgtggtgtgcgtcagcttcctggttttcatgatcatcctggga
gtgttccggatccgggccgcgcaccagcgaaccatgagggaccaggacacgggcaaagag
aacgagatggattgggatgactctgccctgaccattacagtgaacccgatggagacctac
gaggaccaacacagcagtgaagaggaggaggaggaggaggaagaggaggagagtgaggac
ggtgaggaagaagacgacatcactagtgcagagtcggaaagcagcgaggaagaggaaggg
gagcctgaggaagaccagcagaatgtgaatcgacagcagcagctcgagtgggacgactcc
accctcagctattga
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