Antechinus flavipes (yellow-footed antechinus): 127555902
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Entry
127555902 CDS
T08818
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05014
Amyotrophic lateral sclerosis
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127555902
05017 Spinocerebellar ataxia
127555902
05022 Pathways of neurodegeneration - multiple diseases
127555902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127555902
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127555902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
127555902
NCBI-ProteinID:
XP_051844581
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All DBs
Position
1:complement(117117742..117142149)
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AA seq
1049 aa
AA seq
DB search
MLKPQPSQPSQPQQTPIQQPAPARRPPGGTSPPNGSLGGTPASASVPGPPTAASPGLGPP
AGGSGIRRGGEGVLPPQPPTHQHQERPGGAATGSTRGQSTGKGPPPSPVFEGVYNNSRML
HFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMV
FKPSDVMMVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDGNSDDYDLE
SDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIE
SSPQYRLRIAMENDDGRTEEEKHSSVQRQGSGRDSPSLVSREGKYIPLPQRMREGGPRGG
VRCSSSRGGRPGIGSLPPRGGPHHPDSSGPTPGPEPRGINGGPSRMSPKAQRPLRGAKTM
SSPSSRPPGETSAPPPTVGRMYPPRSPKSAAPAPASASCPEPPVGSAVPTSTTSIPPVSS
AMEPGAGPISPTSPKVTAPNDGKELPQKEPGRTLEPPELARIAGKAPGLQNEQKRYQLEE
LKKFGAQFKLQSSSSPEANLDPFSPRGPKEGGVEAKGKEKEVEGLLAPEPLVSSGSSKTE
SPPDKEEKLSLPSTGGTEGPEQSQTPRQNQMGSPPGGISKGDDKEEGPVTDQVKKSTLNP
NAKEFNPSKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGMYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPIMQAAAAAGPPLVAA
TPYSSYISYNPQQFPGQPTMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQ
YPPAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQP
PHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFTNM
AHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGGVPQSGVPALSASTPSP
YTYIGHHQAALLGFDSKGTSCLTQDKLIT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgcagccgtctcagccatctcagccccagcagacacccatccagcaaccg
gcaccagcacgccggcctcccgggggaaccagcccccccaacggaagcctcgggggtacc
ccagcctccgcctcggtcccggggccgcccactgccgcttccccgggcctagggcctcct
gccggaggcagtgggatccgccggggaggtgagggggttttgccgcctcagccgccgaca
catcaacatcaggaacggcccgggggcgctgctactggcagtaccaggggacagagcaca
ggaaaggggcccccaccatcacctgtatttgaaggtgtctacaataattctaggatgctg
cacttccttactgctgttgtgggttccacttgtgatgtaaaagtgaaaaatggtaccaca
tatgaaggtattttcaagactctgagttcaaagtttgaactagcagtggatgcagttcat
aggaaggcttctgagccagcaggtggtccccgtcgagaggacatcgtggataccatggtg
tttaagccaagtgatgtgatgatggttcacttcagaaatgttgacttcaattatgccact
aaggataagttcacagattctgccattgccatgaactcaaaggtgaatggtgaacacaaa
gaaaaggtgctacagcgctgggaagggggtgatggcaacagtgatgactacgatcttgaa
tctgatatgtctaatggatgggaccctaatgaaatgttcaagttcaatgaagaaaattat
ggagtaaagacaacttatgacagtagcctctcttcttatacggttcccttggagaaagac
aactcagaagagtttcgtcaacgggagctccgtgcagcccaactggcccgagaaatagag
tccagtcctcagtatcgtttacgtattgctatggagaatgatgatggacgaacagaggag
gagaagcatagctctgtgcagcgacagggctcaggtcgtgatagtcccagtttagtgtcc
agggaagggaaatatatccctctgccccagaggatgagggagggaggtccccgaggagga
gttcgatgcagcagctcccggggaggtcgacctggcattggttccttgcctcctcggggt
ggcccccaccaccctgatagtagtggtcctactcctggtcctgagccccgtggcatcaat
ggaggtccttcccgcatgtccccgaaagcccaaaggccccttagaggtgcaaagaccatg
tcttcccctagcagccggccccctggagaaacttctgccccacctcctacagttggtcgg
atgtacccacctcgttcccccaaatcagctgctcctgccccagcctcagcttcctgtcct
gagccacctgtaggctctgcggttcccacctctacaacctccattcctccggtttcgtca
gctatggaacctggagctggccccatttctcccacctccccaaaagttacagctcctaat
gatggaaaagaactaccccaaaaggaacctgggagaactctggagccaccagaactagct
cgaatagctggaaaagcccctgggcttcagaatgaacaaaaacgttatcagttggaagaa
ctgaagaagtttggagctcaatttaagctccaatccagcagttctcctgaagccaaccta
gatcctttctccccccgaggccccaaggagggtggggtggaagccaaaggaaaggaaaag
gaggtggagggccttctggctccagagcccctggtgtcttctggctcctctaaaacagaa
tctccacctgataaggaggaaaagctgtccctcccctcaactggagggactgagggacca
gaacaatctcaaacacctcgacagaaccaaatgggcagtcctcctgggggcatcagcaaa
ggggatgacaaagaagagggacctgtcactgatcaagtgaagaagtcgacgctgaatccc
aatgccaaggagttcaatccttcaaagcctttgttgtctgtgaacaagtcaaccagcacc
ccaacttctccaggtccccggactcattcaactccttcaatccctgtgctgacagcaggc
cagagtgggatgtatagcccccaatacatctcctatatacctcagatccacatggggcca
gccgtgcaggctcctcagatgtacccataccctgtatctaactctgtacctggtcagcag
ggcaaataccggggagctaaaggttccttgccccctcaacgctcagaccagcaccagcca
gcctcagcaccccctattatgcaggcagcagcagctgcagggccccctttggtggcagcc
acaccatattcttcctacatctcctataatccccagcagttcccaggccagccgactatg
atgcagcccatggcgcattatccctcacagcctgtctttgccccaatgcttcagagtaac
ccaaggatgctgacatcaggcagccacccccaggccatcgtctcatcttctactcctcag
taccctccagcagagcagcccactccccaagccctttatgccaccgttcaccagtcctat
ccacaccatgccacgcagctccatgcccaccagccgcagccagccaccacccctactggg
agccagccgcaatcccagcatgcggcccccagccctgtccagcatcaggcagggcagcca
ccacacttgggtagtgggcagccacaacagaacttgtaccatccaggtgccttaacaggc
acaccaccatctctgccaccgggaccctctgctcagtcccctcagagcagcttccctcag
ccagctgccgtctatgccatccatgcccaccagcagctaccccacggctttaccaatatg
gcccatgtcacccaggcccatgtccagactggaattacagcagccccaccccctcatcct
ggggctccccacccaccccaggtgatgctgctgcacccaccccagagccatgggggtcca
cctcaggggggtgtgccccagagtggtgtgcctgctctttctgcttctacaccttcaccc
tacacctacatcggacaccaccaagcagccctgcttggttttgactccaagggaacatca
tgcctcactcaggataagctgatcacctga
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integrated database retrieval system
