Antechinus flavipes (yellow-footed antechinus): 127555944
Help
Entry
127555944 CDS
T08818
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127555944
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127555944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
127555944
NCBI-ProteinID:
XP_051844669
LinkDB
All DBs
Position
3:600730656..600873332
Genome browser
AA seq
2022 aa
AA seq
DB search
MRGPLGTEEEPPQLPEEEEEEMENDEDMSGLSPYSSKGLSNTPVFWLPPEEEDGGLEGLE
EFYPEEPVCVPKKKKSKKLKENKTSKVKRRKKEGSNDELSDNDEEMEEKSDSEGSDYSPN
KKKKKKLKEKKEKKSKRKKKDEEDDDNEDGGLKEPKSSGQLMEEWGLDDVDYLFSEEDYH
TLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAA
VETVTIAPPLTVSPPQPIQPMPIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKF
RFGGIANKRKKGSSSEEEDREESDFDSASINSSSMRSECSSALGKKGKRRRKKKRIEDGD
GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEMEKAPEGKWSCPHCEKEGIQWEP
KDEEEEDEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLC
PRCTCPPLKGKVQRILHWKWTEPPAPFITVLPPPDADPSIPLPKPLEGIPEREFFVKWAG
LSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPXDYGSGDEEGKSEKRKNKDPHYAK
MEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENL
KQGYWNHRELMLGEDSRPPKRLNKKGKKLKDDKLEKPPETPLVDPTVKFDKQPWYIDATG
GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAP
LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQI
KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT
PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVF
KNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPY
LFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLE
DFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVII
YDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL
GSKSGSMTKQELDDILKFGTEELFKDDVEGMMPQGQRINVPEPVAPAPDVQASKGGGTLA
AGVKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVA
QYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNY
NDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPL
LARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLF
MRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIP
ESKKSNEIVSSDPNTPVPASPAHIPPGPLGLPGILVSDKMEAQLGFLDEKEQMEPKPPKP
PELQLPRMPSDKGDGEDKQENLENKERSREERREEKEKRDPSPDRLLKEDVLPEKEKALE
KVELNMNHGRGDDRDFRPEDSKVEEKEMVETQQNGEKEEDEDGKKDDKNGKFKFMFNIAD
GGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILN
EPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARL
AEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVA
ARLQMSERSILSRLTNRAGDPTVQQGSFGSSQMYNNNFGPNFRAPGPGGIVNYSQMPLGP
YVTATPTGPPASHPDRKGADALKDGAALGRKGKLSDVICIED
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcacagaggaggagccgccgcagctgcccgaggaggaggaagag
gagatggagaacgacgaggacatgtcagggctttctccttactcctcgaagggcctgagt
aacacccctgtcttttggttgcctcccgaagaagaggatgggggccttgaaggcctggaa
gagttctatcctgaggaaccagtatgtgttcccaagaagaagaaatccaaaaaactcaag
gagaacaagacatctaaagtgaaacggagaaagaaagaggggagcaacgatgagctgtct
gataacgatgaggagatggaagagaaatctgacagtgaggggagtgattattctcctaat
aaaaagaagaagaaaaaactcaaagagaagaaagagaaaaagtccaagcggaaaaagaag
gatgaagaagatgatgataatgaagatggaggtttaaaggagcccaagtcctcagggcag
ctcatggaggagtggggcctggacgacgtggattacctgttctcggaagaggattaccac
acgctgaccaactacaaggccttcagccagtttctcaggccactcattgccaagaagaac
cccaagatccccatgtcgaagatgatgacggtgctgggggccaagtggcgagagtttagc
gccaacaatcccttcaaggggagctcggcggcagcggcggcggcggcagtggccgctgcc
gtggagaccgtcaccatcgcgccaccgctgaccgtcagcccgcctcagcccatccagccc
atgcccatccggaaggccaagaccaaggagggtaaagggcctggtgtgaggaagaaaatc
aaaggctccaaggatggaaagaaaaaaggcaaagggaaaaaaatggccggcctcaagttt
cggtttggagggatcgctaacaagaggaaaaagggctcctcgagtgaggaagaggaccgg
gaggagtcagactttgacagcgccagtattaacagctcttccatgcgctcggagtgctct
tcagccttgggcaagaaggggaagaggagaaggaagaagaagagaatcgaagatggggat
ggctacgagacagaccaccaagactactgtgaggtctgccagcaagggggagagatcatt
ttgtgcgacacctgcccccgggcctatcacctggtgtgcctcgatccggagatggagaaa
gctccggagggcaaatggagctgcccccactgtgagaaggagggcatccagtgggaacca
aaggatgaggaggaggaggacgaggagggcggcgaggaggaagaggacgaccatatggag
ttctgccgcgtgtgcaaggatggcggagagcttctctgctgcgatacctgcccttcctcc
taccacctgcactgcctgaacccgccactgccggaaatcccaaatggtgaatggctctgc
ccgcgctgtacatgcccacccttgaaagggaaagttcagaggattctgcactggaaatgg
acagagccgcccgcccccttcatcactgtgctgcccccgcccgatgctgacccgagcatc
cctctgcccaagcctctggaaggcatccctgagcgggagttctttgtgaagtgggctgga
ttgtcctactggcattgttcctgggtgaaggagctgcagctggagctataccacacggtc
atgtatcggaactaccaaaggaagaacgacatggacgagccgccgcctntcgactatggc
tctggagatgaggagggcaagagtgagaagaggaagaacaaggatccccattacgccaag
atggaggagaggttctatcgctatgggatcaagcccgagtggatgatgatacatcggatt
ctgaatcacagctttgacaagaagggggacgtgcattacctgatcaaatggaaggacctg
ccctatgatcagtgtacctgggagatcgatgacattgacataccctactatgagaacctg
aagcagggctattggaaccacagggagctaatgttaggagaagattccaggccgcccaag
agactgaacaagaaggggaaaaaactgaaagatgacaaactggaaaagcctccagagact
cccttggtggatcccaccgtcaagttcgacaagcagccatggtacatcgacgccacagga
ggcaccctccacccttatcagctggagggactgaactggctgcggttctcctgggcccag
ggcacagacaccatcctggccgatgagatgggcctggggaagaccgtccagaccatcgtg
tacctgtattccctctacaaggagggtcactctaaggggccgtacttggtcagtgccccg
ctgtccaccatcatcaattgggagagggaatttgagatgtgggctcctgacttttacgtg
gtcacctacaccggggacaaggagagccgatcggtgatccgggagaatgagttttccttt
gaagacaatgccatccggagtgggaagaaggttttccgcatgaaaaaagaggcacagatc
aagttccacgtgttgctcacgtcctacgaactcattaccatcgaccaggccatcctgggg
tccattgagtgggcttgtctggtggtagatgaggctcacaggctgaaaaacaaccagtcc
aagttctttagggtgttgaatagctacaagatcgactacaagctgctgcttacagggaca
cccctacagaacaacctggaggagctgttccatcttctaaacttcctgactccagagcgg
ttcaacaatctggagggcttcctggaagagtttgctgacatctccaaggaagatcaaatc
aagaaactgcatgacctgctggggccccacatgctgcggcggctgaaggctgatgtgttt
aagaacatgccagccaagacggagctgatcgtgagggtggagctgagtcagatgcagaag
aaatattacaagttcattctaaccagaaattttgaagccttgaactccaaaggtggtggg
aatcaggtatcactacttaatatcatgatggacctgaagaaatgctgcaaccatccctat
cttttccctgtggctgccgtggaggcaccggtcttacccaatggctcctatgatggcagc
tccttggtcaagtcttctgggaagctcatgctcctacagaagatgctgaaaaagttacgt
gatgaagggcaccgggttctgatcttctcgcagatgaccaaaatgctggatctgctagag
gacttcctggaatatgaaggctacaagtacgagcggattgacggagggatcacgggaggt
cttcggcaagaagccatcgacagattcaatgctcctggagcccagcagttctgtttcctg
ctctccacccgggctgggggtttgggcatcaacctggccactgctgacactgtgatcatc
tacgactcagactggaatccccacaacgacatacaggccttcagcagagcccaccgcatt
gggcagaacaagaaagtcatgatctaccgcttcgtcacgcgggcctccgtggaggagcgg
atcactcaggtagccaaacgcaagatgatgctgacgcatctggtggtacggccgggcctg
ggctccaaatccggatccatgaccaagcaggagctggacgacatcctgaaatttgggacg
gaggagctctttaaagatgatgtggaaggcatgatgcctcagggtcagcggatcaacgtg
cccgagcccgtggcgcctgcccccgatgtccaagcctccaaaggtggtggcaccttggca
gctggggtgaaaaaaaagcatggcagcaccccaccaggtgacaacaaagatgtggaggac
agcagtgtgattcattacgatgatgctgccatctccaagctgctggatcggaaccaggac
gccacggatgatacggaactgcagaacatgaatgagtatctgagctccttcaaggtggcc
caatacgtggtccgggaagaagatggagtggaggaggtggagagggagatcattaagcag
gaggagaacgtggaccccgactactgggagaagctccttcggcaccactacgagcagcag
caagaggacctggcccgaaacctgggcaagggcaagagaatccggaaacaggtcaattat
aatgatgcatcccaggaggaccaagaatggcaggatgagctttcggacaaccagtcggag
tactccatcggctctgaggatgaggatgaggattttgaagagaggccagaaggtcagagt
gggaggagacaatctcggagacagttaaaaagtgaccgagacaaacccttaccccctctg
ctggcaagagtcggaggcaacattgaggtcctagggttcaatgcccggcagcggaaggcc
ttcttgaatgccatcatgcgctggggcatgcccccccaggatgccttcaactctcactgg
ctagtccgggacctccgagggaaaagcgagaaggagttcagggcctacgtgtccctcttc
atgagacacttatgtgagccaggggccgacggggcagagacctttgcggatggcgtccct
cgggaagggctctctcgacaacatgtgctcactcggattggagtcatgtcattagttagg
aagaaggtccaggagtttgaacacgttaatgggaaatacagcacgcctgacctgattcct
gagagcaagaaatccaatgagatcgtctcctcagatcccaacacccctgtcccagccagc
ccagcccatattcctcctggccctttggggctcccaggtattcttgtttcagacaaaatg
gaagctcagctgggcttcctggatgaaaaagagcaaatggaaccgaaaccccccaaacct
cctgaactccagcttccgaggatgccctctgacaaaggggatggagaggataagcaggag
aatctggagaacaaagagcggtcccgagaggagaggagggaggagaaggagaagcgggac
ccctccccggatcggctgctcaaagaagatgttctccccgaaaaggaaaaagctctggag
aaggtggagctaaatatgaaccacggccgaggggacgacagagatttccggccagaggac
tccaaggtagaagagaaagagatggtggaaactcagcagaatggtgaaaaagaggaagac
gaggacgggaagaaggacgacaagaatgggaaattcaaattcatgtttaacatcgccgac
gggggtttcacagagctgcacacgctgtggcagaatgaggagcgggcggccgtctcctcg
gggaagatctacgacatttggcatcggcgccacgactactggctcctggcggggatcgtg
acgcacggctatgcccgctggcaagacatccagaatgaccctcgctacgtgatcctgaat
gagcccttcaagtcggagatccacaagggcaactacctggagatgaaaaacaagttcctg
gcccggaggttcaagctgctggagcaggctctggtaatcgaggagcagcttaggagggcc
gcgtacctcaacatgactcaagaccccaaccacccagccatggctttgaacgcccgcctg
gcggaagtggagtgcctcgctgagagccaccagcacctgtccaaggagtccctcgctggg
aacaagccggccaacgctgtcctccataaggtactgaaccagctggaggaacttttgagt
gacatgaaggctgatgtaacccgcctgccctccatgttgtcccggatccctcccgtggct
gcccgtctacagatgtctgaacgcagtatcctgagccgcctgacaaaccgagccggagat
cccaccgtccagcagggttctttcggctcctcccagatgtacaacaacaactttgggcca
aacttccgggctcctggaccaggagggattgtcaactacagccagatgcccctcggcccc
tatgtgactgccacgcccaccgggccacccgccagccacccagacagaaaaggagccgac
gccctgaaagatggtgctgctttgggacgcaaggggaaactcagtgacgtcatctgcatt
gaagattaa
DBGET
integrated database retrieval system
