KEGG   Antechinus flavipes (yellow-footed antechinus): 127556406
Entry
127556406         CDS       T08818                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127556406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afz03400]
    127556406
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     127556406
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 127556406
NCBI-ProteinID: XP_051845503
LinkDB
Position
3:complement(619300915..619308488)
AA seq 638 aa
MPEIRLRHVVSCSSQDATHCAENLLKADTYRKWRSAKAGEKQISVILQLEKEEQIHSIDI
GNEGSAFVEVLAGSSAGGAGEHDYEVLLVTSSFMSPSESRSGTNSNRVRLFAADKLVRAT
AEKRWDRVKIVCSQPYSKDSAYGLSFIRLHSPPEKEAPEASPGPKVTKLGAFRVKEDEGT
GSSLRPGSLFFSRAGKAPPAPPREQPGPSYAAATLQASEGVTPQTPPSSSPQPPSASKAP
GKVSPLGRAGNWGATRSPDVPHPPLPFQPQESPKGKRKLDLSQDEPGNRAQARPAQPKLP
APKKPKGPAAGPAQGPPQAEKKGPKAGVGPAELGRILEGVVVVLSGFQNPFRSELRDKAL
ELGAKYRPDWTSDSTHLICAFANTPKYSAVLSRGGRIVRKEWVLDCHCMRRRLPCRRYLM
AGPDSSSDEETPPPPATKHPKANHQAPPAGPKSGSRTPSPEEAGPAHREPQRAPDPEEES
AGAQDHGTEDSGDTEDELRRVVKPRDQQQPPDPGENGEDPYAGSTDENTEDESPESPDQP
IPELPDFFQGKHFFFYGEFPGEERRQLVRYVTAFNGEIEDYMNDQVQFVITAQEWDPSFE
EALLDNPSLAFVRPRWIYSCNEQQRLLPYQLYGVVPQA
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgcctgagatccgcctccgccacgtagtgtcgtgcagcagccaggatgcgacgcactgc
gcagaaaacctcctgaaggccgacacctaccggaaatggcgctccgccaaggctggggag
aagcagatctccgtcatcctgcagctggagaaggaggagcagatccacagcatagacatc
ggcaatgagggctctgccttcgtggaggtgctggcgggcagctccgcggggggcgccggg
gagcacgactacgaggtcctcctggtgacctcgtccttcatgtccccgtccgagagccgg
agcgggacgaactccaaccgggtccgcctgtttgccgccgacaagctggtccgggccacc
gctgaaaagcgctgggaccgcgtcaagatcgtgtgcagccagccctacagcaaggactcc
gcctacggcctgagctttataaggctgcacagccccccggagaaggaggcgcccgaggcc
agccccggccccaaggtgaccaagctgggagccttccgagtgaaggaggacgagggcacc
ggcagctccctgagacccggctccctcttcttcagccgggccggcaaggctcccccagcc
ccccccagagagcagccgggccccagctacgcagccgccaccctgcaggcctccgagggc
gtgaccccccagactcctccctcgtcgtccccccagcccccctccgcaagcaaagccccc
ggcaaggtgagtcccctcggccgggcggggaactggggggcgaccagatccccggatgtg
ccccatccgcccctccccttccagccccaagagtctcccaagggaaagaggaaattggac
ttaagccaggatgaaccaggaaacagagcccaggcccgtccggcccagcccaagctacca
gcccccaagaagcccaaagggcctgccgcgggcccggcccaggggcctccccaagctgaa
aagaaggggccgaaggccggggtcgggcccgcggagctggggaggatcctcgagggcgtc
gtggtggtcctgagcggcttccagaaccccttccgctcggagcttcgggacaaggccctg
gagctcggcgccaagtaccggccagactggacctcggacagcacccacctcatctgtgcc
tttgccaacacgcccaagtacagcgcggtcctgagccggggcgggcgcatcgtgcgcaag
gagtgggtgctggactgccactgcatgcggcggagactgccctgtcggcgctacctcatg
gcaggcccggactccagcagcgacgaggagacgccgccccctcccgccaccaagcacccc
aaggctaaccaccaggctcccccagcggggcccaagtcaggctccaggacgccgtccccc
gaggaggccggcccggcccacagagagccccagcgcgccccagacccagaggaggagtcg
gcaggtgctcaggaccacgggaccgaagactctggggacacggaggacgagctgaggagg
gtggtcaagccgagggaccagcagcagcccccagacccaggagagaacggagaagacccc
tatgctggctccacggacgagaacacggaggatgagagccccgagtccccggaccagccc
atccccgagctgccagattttttccagggcaaacacttctttttctatggagagtttcct
ggtgaggagcgacggcagcttgtccgctacgttactgcgttcaacggggagatagaagat
tacatgaatgatcaggtccagtttgtgatcacggcccaagagtgggaccccagctttgag
gaggccctgctggacaacccgtcgttggccttcgtgcgtccccggtggatttacagctgc
aacgagcagcagaggttgctgccctatcagctctatggggtggtcccccaggcctga

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