Antechinus flavipes (yellow-footed antechinus): 127556497
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Entry
127556497 CDS
T08818
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127556497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127556497
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127556497
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127556497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
127556497
NCBI-ProteinID:
XP_051845648
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All DBs
Position
3:complement(623791450..623799100)
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AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPTHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNHHPQSPAVPSSYPAGPAPAPPALGNGPGSNGAPVAPPKANPAPGHNAST
PTPYAQAVAPPAPSAGSAQPRPPSVQPGGSGGKQNGATSEWGVGETRDVSGKRGRRAFPR
DAPSSPAGYSSVVADNSSELSLSGSSSGGSSQALGPPPGPHNPPPTATKEASGAAPAGAG
GVGAGAGSGAGGPSLLVPLPVNPPSSPTPSFSEPKAAGALLNGPPQFSTAPEIKAPEPLS
SLKSMAERAAISSGIEDPVPALHLAERDMLLGSSSAPPASAQPPLQLSEVNIPLSLGVCP
LGPVALTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPLYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagcgaaaactgcaaggcgagattgaccgctgcctcaagaaggtgtccgag
ggagtggagcagtttgaggacatttggcagaagctccacaacgcggccaacgccaaccag
aaggagaagtacgaggccgacctgaagaaggagattaagaagctacagcggctgagggac
cagatcaagacatgggtagcttccaacgaaatcaaagacaaacggcagctcatcgacaac
cgcaagctcatcgagacgcaaatggagcggttcaaggttgtggaacgggaaacgaagacc
aaagcgtacagcaaggaggggctcggcctggcccagaaggtggacccggcccagaaggag
aaggaggaggtcggccagtggctcacgaataccatcgacaccctcaacatgcaggtggac
cagtttgagagcgaagtggagtcgctgtcggtgcagacccgcaagaagaagggggataag
gataagcaggatcggatcgagggcttgaaacggcacatcgagaaacaccgctaccacgtg
cgcatgttggaaaccatcctgcgcatgctggacaacgactccatcctggtggactcgatt
cggaagatcaaggacgatgtggaatattacgtggactcctcgcaggaccccgactttgag
gagaacgagttcctctacgacgaccttgatctcgaggacattccgcaggcgctggtcgcc
acctcccccccgacccacagccacatggaggatgagatctttaatcagtccagcagcacg
cccacctccaccacctccagctcccccatcccgcccagcccagccaactgcactacggaa
aactctgaagacgacaaaaagagaggacggtcgaccgacagcgaagtgagccagtctccg
gccaagaacggttccaagcctgtccacagcaaccaccacccacagtcccctgctgtgccg
tccagctacccggccggccccgcccctgcgccccccgcactgggcaacgggcctggcagc
aatggggctcccgtggcgcctcccaaagccaaccccgccccgggccacaacgccagcacc
cccaccccatacgcccaggccgtggcccctcccgcgccgagcgccggctccgcccagccc
aggccacccagtgtccagcccggcgggagtggcggcaaacagaacggggccaccagtgag
tggggggtcggggagacgcgggacgtgtccgggaagcggggtcggagagctttccctcgt
gacgctccctcctcgcctgcaggctacagctccgtggtggccgataactcttcagagctg
agcctgagtggcagcagcagcgggggaagcagccaagccctggggccccccccgggtccc
cacaacccgccccccaccgccacgaaggaggcatctggggcagcgccggcaggggcaggg
ggcgtgggcgcgggtgcagggagtggtgctggaggacccagcctcctggtgcccctgccc
gtgaacccccccagctccccaacacccagcttcagtgagcccaaggcagctggggccctg
ctcaacggccccccccagttcagcacagccccggagatcaaggctcctgagcccctgagt
tccctgaagtccatggcagagcgggcggccatcagctccggcatcgaggaccccgtccct
gccctgcacctggccgagcgtgacatgctcctgggcagcagttcggcccctccggcctca
gcccagccgcccctgcagctgtccgaggtcaacatccccctgtcactgggcgtctgcccc
ctggggcccgtggccctcaccaaggagcagctctatcagcaggccatggaggaggctgcc
tggcaccacatgccccatccttccgactccgagcgcatcaggcagtacctgcctcggaac
ccgtgcccgaccccgctgtaccaccatcagatgccacctccccactcggacacagtagaa
ttctatcagcgcctctccacggagaccctgtttttcatcttctactatctggagggcacc
aaggctcagtacctagctgccaaggccctcaagaagcaatcatggcgatttcacaccaaa
tacatgatgtggtttcagcggcacgaggagcccaagaccatcacagacgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaggggttcacc
ttcgagtaccgctacctggaggaccgggacctgcagtga
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