Antechinus flavipes (yellow-footed antechinus): 127556524
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Entry
127556524 CDS
T08818
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04020
Calcium signaling pathway
afz04024
cAMP signaling pathway
afz04080
Neuroactive ligand-receptor interaction
afz04082
Neuroactive ligand signaling
afz04713
Circadian entrainment
afz04720
Long-term potentiation
afz04724
Glutamatergic synapse
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05017
Spinocerebellar ataxia
afz05020
Prion disease
afz05022
Pathways of neurodegeneration - multiple diseases
afz05030
Cocaine addiction
afz05031
Amphetamine addiction
afz05033
Nicotine addiction
afz05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127556524
04024 cAMP signaling pathway
127556524
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127556524
04082 Neuroactive ligand signaling
127556524
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127556524
04720 Long-term potentiation
127556524
09159 Environmental adaptation
04713 Circadian entrainment
127556524
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127556524
05014 Amyotrophic lateral sclerosis
127556524
05017 Spinocerebellar ataxia
127556524
05020 Prion disease
127556524
05022 Pathways of neurodegeneration - multiple diseases
127556524
09165 Substance dependence
05030 Cocaine addiction
127556524
05031 Amphetamine addiction
127556524
05033 Nicotine addiction
127556524
05034 Alcoholism
127556524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127556524
Ion channels [BR:
afz04040
]
Ligand-gated channels
Glutamate (ionotropic)
127556524
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
MatE
SH3_YKFC_2nd
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
127556524
NCBI-ProteinID:
XP_051845683
LinkDB
All DBs
Position
3:623951718..623978274
Genome browser
AA seq
1313 aa
AA seq
DB search
MRGPPGPHGPPGPANMLLLLALACASPFPEVAPPLGGSSLGEPGTGRPLNVALVFSGPAY
AGEAARLGPAVAAAVRSPGLEVRPVALVLNGTDPRSLMLQLCDLLSGLRVHGVVFEDDSR
APAVAPILDFLSAQTALPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEEY
DWTSFVAVTTAAPGHRAFLAYIEALTDGSLVGWEHRGALTLDPGAGEEVLGARLRSLSAQ
IRLLFCAREEAEPLFRAAAAAGLTGPGYVWFMVGPQLAGGGGGGGPGEPPLLPGGAPLPA
GLFAVRSAGWRDDLAKRVAAGVAVVARGAQALLRDYGFLPELGQDCRAQNRSQRGESLHR
YFMNISWDNRDYSFNEDGFLVNPSLVVISLTKDRTWEVVGTWEQQALRLKYPLWSRYGRF
LQPVDDTQHLMVATLEERPFVIVEPADPLSGTCIRDSVPCRSQLNLTHSPPPDAPRPEKR
CCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTI
NEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVF
IFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVW
AFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLRFGTVPNGSTEKNI
RSNYEAMYNYMVRYNQPRVEEALIQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGK
VFATTGYGIALQKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKLDI
DNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHHLDFLLAFSRGMYSCCSADAA
PPAAKPLPPQPLPLPSPAYPPPRPALAPTAAGPFLPRERAAVDRWRRPKPTSGPGPVPVP
VTPEAAGPPRAPLPGAMADSFHRYYGPIEPQGLGEPRVPRPARPLSPPPPPQKPPPSYFA
IVREKEAPGPGEPAPAPYAGYPSPPAPPAAPLCHLAYEDESPPAPSRWPRSDPESQPLLR
GAGAGGSSAAPPPPPCRAPPPACPYLDLELSDSDDSESLGAGSGAGLEPWWVPDFYPYAD
RLGRYWSVDKLGGWRAGSWDYLPPRPGPAAWHCRHCASLELLPPPRHLSCSHDGLDGGWW
APHHPPPPPWAAGPHRRRPRCRCPRGHRAPSRRSGPAPHRRRHAGLWDLPPPAPTSRSLE
DLSTCPRVASVHGRHSRRCPHASHWGPAPRRHRGGDLGTRRGSAHFSSLESEV
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcccccccggcccccacggccctccaggcccagctaacatgctcttgctgctg
gccctggcctgcgccagccccttccctgaggtggcccccccgctgggcggcagcagcctc
ggggagccgggcaccgggcggcccctcaacgtggcgctggtgttctcggggccggcctac
gcgggggaggcggcccgcctgggccccgccgtggccgccgccgtccgcagtcctggcctg
gaggtgcgccccgtggccctggtcctcaacggcacggacccgcgcagcctcatgctccag
ctgtgcgacctgctctccggcctccgcgtgcacggcgtggtcttcgaggatgactcccgc
gccccggccgtggcccccatcctcgacttcctctccgcccagaccgccctgcccatcgtg
gcggttcacggcggcgcggctctggtcctcacgcccaaggagaagggctccaccttcctc
cagctgggctcctccacggagcagcagctgcaggtgatcttcgaggtgctggaggagtac
gactggacgtccttcgtggcggtgaccacggcggcccccgggcaccgggccttcctggcc
tacatcgaggcgctgaccgacgggagcctggtgggctgggagcaccggggggccctgacc
ctggaccccggggccggcgaggaggtgctgggggcccgcctgcgcagcctcagcgcccag
atccgcctgctcttctgcgcccgcgaggaggcggagccgctgttccgggccgcggcggcc
gccgggctcacgggccccggctacgtgtggttcatggtggggccccagctggcgggaggg
ggcggggggggcgggcccggggagccgccgctgctgccggggggcgccccgctccccgcg
ggcctcttcgccgtccggtcagcgggctggcgggacgacctggcgaagagggtggcggcg
ggcgtggcggtggtggcccggggcgcccaggccctgctgcgggactacggcttcctcccc
gagctgggccaggactgcagggcccagaaccgcagccagcggggagagagcctgcaccgg
tatttcatgaacatctcctgggacaatcgggactactccttcaatgaggacggcttcctg
gtgaacccctcgctggtggtcatctccctgaccaaggaccgcacctgggaggtggtgggg
acctgggagcagcaggctctccggctgaagtaccccctgtggtcccgctacggccgcttc
ctgcagcccgtggacgacacccagcacctcatggtggccacgctggaggagcggcccttc
gtcatcgtggagccggccgacccgctcagcggcacctgcatccgggactcggtgccctgc
cggagccagctcaacctcacccacagccccccgccggacgccccccggccagaaaagcgc
tgctgcaaaggcttctgcatcgacatcctcaagcgactggcccagaccatcggcttcagc
tacgacctctacctcgtcaccaacggcaaacacgggaagaagatcgatggcgtctggaac
ggcatgattggggaggttttctaccagcgggcggacatggccatcggctccctcaccatc
aacgaggagagatcggagatcgtcgacttctccgtgccctttgtggagacgggcatcagc
gtcatggtggccaggagcaatggcacggtgtcaccctccgccttcttggagccctacagt
ccagccgtttgggtcatgatgtttgtcatgtgtctgaccgtggtggcggtcaccgtcttc
atctttgagtacctcagtcctgtcggctacaaccgcagcctggccaccggcaagcgtcct
ggcggctcaaccttcaccataggaaagtccatctggctcctctgggcgctggtcttcaac
aactcggtgcccgtggagaacccccggggcaccaccagcaagatcatggtgctggtctgg
gccttctttgccgtcatcttcctggccagctacacggccaacctggcggccttcatgatc
caggaggagtacgtggacaccgtgtccggactgagcgaccgcaagttccagcggccccag
gagcagtacccgcccctgcgctttgggaccgtgcccaacggctccacagagaagaacatt
cgcagcaactacgaggccatgtacaactacatggtgcgctacaaccagccccgcgtggag
gaggccctgatccagctgaaggccgggaagctggacgccttcatctatgacgccgccgtc
ctgaactacatggcccggaaggacgagggctgcaagctggtgaccatcggctcgggcaag
gtcttcgccaccacgggctacggcatcgccctgcagaagggctcccgctggaagcggccc
atcgacctggccctgctgcagttcctgggggacgatgagatcgagatgctggagcgcctg
tggctgtccgggatctgccacaacgacaagatcgaggtcatgagcagcaagctggacatc
gacaacatggcgggggtcttctacatgctgctggtggccatgggcctgtccctgctggtc
ttcgcctgggagcacctggtctactggaggctgcgccactgcctggggcccacccaccac
ctggacttcctgctggccttctccaggggcatgtacagctgctgcagcgccgacgccgcc
cccccggccgccaagcccctgccgccccagcccctgcccctgcccagcccggcctacccg
cccccccggccggccctggcccccacggccgccggccccttcctcccccgcgagcgggcc
gcggtggaccgctggcgccggcccaagccgacctcggggcccgggcccgtccccgtcccg
gtcacccccgaggccgcgggccccccccgcgcccccctgcccggggccatggccgacagc
ttccaccgctactacggccccatcgagcctcagggcctgggggagccccgggtgccgcgg
ccggcccggcccctgtccccgccccccccgccccagaagccgcccccctcctacttcgcc
atcgtgagagagaaggaggcgccggggcccggcgagccggcccccgccccttacgccggg
tacccgtccccgcccgccccccccgccgccccgctctgtcacctggcttacgaggacgag
agccccccggccccgagccgctggccccgctcggacccggagagccagcccctgcttcgg
ggggccggcgcgggggggagctccgcggcccccccgcccccgccctgccgggcgcccccc
ccggcctgcccctacctggacctcgaattatccgactcggatgactcggagagcttgggg
gcgggctccggggccggcctggaaccctggtgggtgcccgacttctacccgtacgccgac
cgcttgggccgctactggtcggtcgacaagctggggggctggcgggcaggcagctgggac
tacctgcccccccggcccggccccgcggcctggcactgccgccactgcgccagcctggag
ctgctcccgcccccgcgccacctcagctgctcccacgacgggctggacggcggctggtgg
gccccgcaccaccccccgccccccccgtgggccgccgggccccaccggaggcgcccccgc
tgccgctgcccccgcggccaccgcgccccgagccggcgctccggcccggccccccaccgg
cggcgccacgcggggctctgggacctgccgccgcccgcccccacctcccgctccctggag
gacctgagcacctgcccccgcgtggcctccgtgcacggccgccactctcgccgctgcccc
cacgccagccactggggccccgcgccccgcagacaccgcgggggggacctgggcacccgc
cgcggctccgcccacttctccagcctcgagtccgaggtatga
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