Antechinus flavipes (yellow-footed antechinus): 127556680
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Entry
127556680 CDS
T08818
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127556680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127556680
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127556680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
127556680
NCBI-ProteinID:
XP_051845942
LinkDB
All DBs
Position
1:120953596..121194581
Genome browser
AA seq
2908 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHTLNQVSTDHIELKDNLGSDDPEGDIPVLLQSVLARNPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRYMAQPNSPVPSPYAP
QSPAGYMPYSHPPSYTPHPQMQQASVSSPIVPSGLRNMHDNKVSGQLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGIENSNVSESDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVTAKQPQTSVVQSQQQAPQQGTLYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVESQASVTQDSDTIKKPEESKQCNDGAVSIHQEDIGVLKQKPENHPETPR
KKSDSESVKTEMKQNENKLMESKPNENRLLETKLNENRPIAETKQNENRPAAETKQNESK
LVAETKQTESRPVPEVKQTESRSLIEAKHNESKPEAKPNENRPASVEVKQNESRSTEAKQ
TESRPVTEVKQPESKPTADAKQNESKAAEIKQNENRIETKQNESKIAESKQNENKTTDTK
SNENKQNNGKQETTKLRPETPKQKTEGRPETPKQKAEGRPETPKQKSDGRPETPKQKGDG
RPETPKQKGDGRPETPRHRHERRDSGKTSAEKKPETRHKQDAKSDSPRLKSERSETLKQR
PDGRSVSESLKRDHDNKQKSEDRTESERHRGDQSRIRRPDTLRSSNRNEHDPKHGVKSDG
SKTDKLERKHRHESGESRERLSSGEQKSRPDSPRVKESRGDTSKTRSDRSGFKSPNSKDD
RRTDGNKSKVDSNKAHPENKADFPSYLLGGRSGALKNFVIPKIKRDKDGNVTQETRKMEL
KGEQRDKIEKLGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDRSRSSLKASKNKPSKS
NKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSED
AFESSRKRHKKDKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGRYRNRSPSDSDM
EDYSPPPSLSEVARKMKKREKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDM
DFTAFGDDEEIPQELLLGKHQLSELGSESAKIKAMGIMDKLATDKTVKVLNILEKNIQDG
SKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERV
IQYTKFHLQNTLYPQYDPVYRVDPHGGGVLTSKAKRAKCSTHKQRVIVMLYNKVCDIVSS
LAELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEI
FTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEE
SNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKP
EWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIAR
ILKQVTGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTLETEKAMKSQK
DEDSSEGTHHAKEVETTGQIMHRAESRKKFLRSIIKTTPSQFSTLKMNSDTVDYEDACLI
VRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGV
HGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDIC
IEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDV
VAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLADSDNKG
VNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVP
LMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGA
LSKLKIQHQEDSNSTVLTTNKPALLRSLFTVGALCRHFDFDQEDFKGSSKVNIKDKVLEL
LMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILADKNSSVNLKIQVLKN
LQTYLQEEDTRMQQADKDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQVLEAFFHTQSS
VRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEIDKKYAGFIHMK
AVAGMKMSYQVQQAINTSPKDAVRGFRQDESSSALCSHLYSMIRGNRQHRRAFLIALLNL
FDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDK
RKEKKPSPNRESASGSDSEEEVSKPRKSRKRVDSDSDSDEEDDINAVMKCLPDNSSPLIE
FANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGIHFHPKQTLD
FLRSDMSNSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSASTNARNKAITSLLG
GGSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCP
KYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKI
ALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8727 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcggggattgctagtctcaca
gacctcttgaatcagttgcctcttccatctcctttacctgctacaactacaaagagcctt
ctgtttaatggacgaatagcagaagaggtaaactgtcttttggcctgtagggatgaaaat
ttggtttcacagcttgttcacactctcaaccaggtgtcaacagatcacatagagttgaaa
gataatcttggtagtgatgatccagaaggagacataccagtcttgctgcagtctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcagaacagatacgtacagagtgga
atgatgatgtcccagtataaactttctcaaaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccttccagccgatttgtgcccccacagaca
agctctgggaacagatatatggcacaaccaaacagcccagtgcctagtccatatgcccca
cagagccctgcaggatacatgccatactcacatcctccaagttacacaccacatccacag
atgcagcaagcatcagtatcaagtcccattgtcccaagtgggctgagaaacatgcatgat
aataaagtttctggtcagttgtctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgatggagat
tcttctacaatgaggaatgctgcatcatttcctttgaggtctccacagccagtgtgctcc
ccagctggaagtgatggaactcccaaaggatcaagaccaccgttaatcctacaatctcaa
cctccaccctattcatcacctagagatgttccacccgacatattattagattcaccagaa
agaaaacagaagaaacaaaagaaaatgaagttaggaaaagatgaaaaagatcagagtgaa
aaagctgcaatgtatgatatcattagttctccatctaaggactctactaaacttacatta
agactttctcgcgtaagatcttcagatatggaccagcaggaagatatgctttctggtata
gaaaatagcaatgtatcagagagtgatattccttttaatgtgcagtacccaggacaaact
tcaaaaacacccattacaccacaggatgtaaaccgcccgctaaatgctgctcagtgtttg
ccgcagcatgaacagacagcattccttcaggcacaacaagtgcctgttttacaacagaac
acttcagtgactgcaaaacaacctcagacttctgtggtacagtctcaacaacaagcacca
caacaaggaacgctatatgatgaagtagaattggatgcattggctgaaatcgagaggata
gaacgcgaatcagctattgaaagagaacgtttttcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctactggaggt
aatagaccagcttctcaggagacaggttctacaggcaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggacgagtagagtctcaggcatctgtaactcaggat
tcagacaccattaaaaagcctgaagaaagcaaacagtgtaatgatggggctgtttctatt
catcaagaagatattggggttcttaaacaaaaacctgaaaaccatcctgagacccctagg
aaaaagtctgattctgagagtgtaaagactgaaatgaagcaaaatgaaaacaaactgatg
gaatctaaaccaaatgaaaaccgattattggagacaaaattgaatgagaatagaccaata
gcagaaactaaacagaatgagaacagaccagcagcagaaactaaacagaatgaaagcaaa
ttggtggcagaaacaaagcagactgagagcagaccagtgccagaagttaagcagactgag
agcagatctctcatagaagccaagcataatgaaagtaaaccagaagctaaacccaatgag
aacagaccagcatcagtggaagtgaagcagaatgagagcaggtcaacagaagcaaagcag
actgaaagtagaccagtgacagaagttaaacagcctgagagcaaaccaacagcagacgct
aaacaaaatgagagtaaggctgcagaaattaaacagaatgaaaatagaatagaaactaaa
caaaatgagagcaaaatagcagaatcaaaacaaaacgagaacaaaaccacagacacaaaa
tcaaatgagaataaacaaaataatggcaaacaggaaacaaccaagctgagacctgaaact
cccaagcaaaaaaccgagggccgacctgaaactcccaagcaaaaagctgagggccgacct
gaaactcccaaacagaaaagtgatggtcgccctgaaacccccaagcaaaagggtgatggc
cgccctgaaacccccaagcagaagggtgatggccgccctgaaactccaagacatagacat
gagagaagagattctggaaagacatctgcagaaaagaaacctgaaacaagacataaacag
gatgctaaatctgattctcctcgattaaaatctgagagatcagaaaccttaaagcaaagg
ccagatggacgatctgtttctgagtcactaaagcgtgaccatgataataaacagaaatcg
gaggataggactgaatcagagagacatcgaggagatcaatccagaattcgaagaccagat
acattaagatcctctaacagaaatgaacacgatcccaaacatggcgttaaatctgacggt
tcaaaaacagataaactagaaagaaaacacagacatgaatctggggaatccagggaaaga
ctgtcttctggggaacagaaatcaagacctgatagtcctcgtgttaaagagagtagaggt
gatactagtaaaacaagatctgatagatctggttttaaatcgccaaatagtaaagatgat
cggaggacagatggtaataaaagtaaagtagatagtaataaagcacaccctgaaaataaa
gccgattttcccagttatttgttggggggcagatctggtgcattgaaaaattttgtcatt
ccaaaaatcaagagagataaagatggcaatgttactcaggagacaaggaaaatggaactt
aagggagaacagagagacaaaattgaaaaattgggactagtagaagatttaaataaagga
gctaaacctgtagttgtcctgcagaagctgtctttggatgatgttcagaaattaattaag
gatagagaggacagatcaagaagttctcttaaagctagcaagaataagccatccaaatca
aataaaggtagtatagatcagtcagtgttaaaagaattaccccctgagctcctggcagaa
attgaatctactatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcaca
gttaatgaaaagccaaaatatgctgaaatcagttcggatgaagacaatgacagtgaagat
gcttttgaatcttctcggaaacgacataagaaggacaaagatgatgataaagcttgggaa
tatgaagagcgtgacagacgaagctctggggatcataggagaagtggccattctcatgaa
ggcaggaggagttccggtggtggccgttatcgaaatcggagcccatcagattcagacatg
gaagattattctcctcctcccagccttagtgaggttgctagaaaaatgaagaaaagagaa
aagcaaaagaagcggaaagcttatgaaccaaaactaacacctgaagaaatgatggattct
tctacttttaaaagatttactgcttcgatagaaaatatcttagaaaatcttgaagacatg
gattttacagcatttggtgatgatgaagagattcctcaggaactgctattgggaaaacat
caacttagtgaattgggcagtgaatctgctaaaattaaagcaatgggaataatggataag
cttgctacagataagacagtaaaagttctaaacattttggagaagaatattcaggatggg
tccaaactttctacattgctaaatcataataatgacactgaagaagaagaacgtctgtgg
agagacctaattatggaaagagttacaaaatcagcagatgcttgtcttactgccatcaac
attatgacatcacctaacatgccaaaagctgtatatattgaggatgtaatagaaagagtt
atacaatacactaaatttcacttacaaaatactctttatcctcagtatgatcctgtttac
agagtggatcctcatggcggaggcgtattaacctcaaaggcaaaacgtgccaagtgttcc
actcacaagcagagagtaatcgtaatgctttataacaaagtttgtgatatcgttagcagc
ttggcagagcttttggagatacaactgctgactgatacaacaattcttcagatatcatca
atgggaataacaccattttttgtagaaaatgtcagtgaactccagttatgtgccatcaaa
ttagtcactgcagtattctcaaggtatgaaaaacataggcagttgattttggaagaaatt
ttcacttcacttgcaagattaccaaccagcaagaggagtctaaggaatttcagattgaat
agtagtgatatggacggcgagcctatgtatattcagatggtgactgctctggttttacaa
cttattcaatgtgtagtacatctaccatcagcagagaaagattctaattcagaagaggaa
tcaaacaaaaaagtggatcaggatgttgtcattactaattcttatgagacagctatgcga
acagcacagaatttcctctccatcttccttaaaaaatgtgggagtaagcaaggtgaagaa
gattacagaccactctttgaaaattttgttcaagatcttctttctacagtcaataagcca
gaatggccagctgctgagttattacttagtttgttagggagacttttggttcatcagttc
agcaataagtcaacagagatggctttaagagtggcatctcttgattatcttggaacagta
gctgcacgattgagaaaagatgctgtgacaagcaaaatggatcaaggatctattgcccga
attttaaaacaggttacaggaggagaagatgaaattcaacaattgcaaaaggcattgcta
gattacttggatgaaaacactgagactgatccttcattagtgttttctcgtaagttttac
atagctcaatggtttcgggacacaactttggagacagaaaaagcaatgaaatcacagaaa
gatgaggattcatcagaggggacacatcatgcaaaagaagtcgaaacaactggtcaaatt
atgcatcgagctgaaagtcggaaaaaatttcttcgaagcattattaaaaccacaccttct
cagttcagtacattaaaaatgaattctgatactgtggattatgaagatgcttgcttgatt
gtaagatacttggcctctatgaggccgtttgcccagagcttcgatatttatttgacacag
atactacgagtacttggtgaaaatgcaatagctgttcgaacaaaagccatgaagtgttta
tctgaggttgttgctgtagatcccagcattttagcaaggttggatatgcagcgaggtgtc
catggaagattaatggataattccactagtgtccgtgaggcagcagtagaattattaggt
cggtttgtcctctgtcgacctcagcttgctgaacagtattatgacatgctgattgaaaga
atattggatactggtatcagtgtcaggaaaagagtaataaagattctgagggatatatgt
attgagcaaccaacatttcccaaaatcacagagatgtgtgtgaaaatgatccgcagagta
aatgatgaagagggcattaagaaactagtaaatgaaacattccagaaactctggtttact
ccaactcctcatcatgacaaagaagcaatgaccaggaagattttaaatatcaccgatgtg
gttgcagcttgtagagatactggatatgactggtttgaacaacttcttcaaaatcttttg
aagtcagaagaagatgcttcttataaacctgtgaaaaaagcttgtactcagcttgttgat
aacttagttgagcatatccttaaatatgaggaatctctagctgattctgacaataaggga
gtgaattctggtcgattggtagcttgcataaccactttgttcttattcagcaaaatcaga
ccccagctaatggtcaaacatgccatgaccatgcaaccataccttaccactaaatgtagc
acacaaaatgatttcatggtcatttgcaatgttgcaaaaatcttagaattagtagtgcca
ttgatggaacatccaagtgaaacttttcttgctaccattgaggaagatctaatgaaactt
atcatcaaatatggcatgacagtagtgcaacattgtgtgagctgtcttggggctgttgta
aataaagtcacacaaaattataaatttgtgtgggcatgtttcaatagatactatggtgca
ctttcaaaattaaaaattcagcatcaagaagactcaaacagcaccgtacttacaacaaat
aaaccagcactgcttagatccctttttactgttggagcactgtgtcgccattttgatttt
gatcaagaagattttaaaggcagcagtaaggttaacataaaggataaagtacttgaactc
ctgatgtattttacaaaacattcagatgaagaagtacaaaccaaagccattattggtcta
ggatttgcatttattcagcatccaagtttaatgtttgagcaagaggtaaagaatctatat
aacagcattctagctgataagaacagctcagtaaatttaaaaatccaagtgttaaaaaat
ctccaaacctacctgcaagaagaagatacacgtatgcaacaggcagataaagactggaag
aaagtagcaaaacaggaagatctaaaagaaatgggtgatgtgtcctcagggatgagtagt
tccatcatgcagctttacctcaaacaagttcttgaggctttctttcacacccaatcaagt
gtgcgtcactttgccctaaatgtgatcgcattaaccctcaaccagggtctcattcatcca
gttcagtgtgtgccatatttaattgccatgggcaccgatcctgagcctgctatgcggaat
aaagctgaccaacagcttgtggaaatagacaaaaaatatgctggattcattcatatgaaa
gctgtggctggtatgaagatgtcttaccaagttcaacaagcaatcaacacatccccaaaa
gatgcagttaggggtttcagacaagatgaatcctctagtgctttgtgttcacatctttac
tccatgatccgaggaaatcgccaacacagacgagcctttctaattgctttactcaatctc
tttgatgacacagcaaaaacagaagtgaatatgctcttgtatatagcagacaatctagcc
tgtttcccttaccagacacaggaagaaccattgtttataatgcatcatatagatattaca
ctctcagtttctggcagtaacctcctgcagtcatttaaggagtctatggtgaaagacaag
aggaaagagaaaaaaccttcgccaaaccgggaaagtgcatctggaagtgatagtgaagaa
gaagtttccaaacctcgaaagtcacgtaaacgagttgattctgattcagattcagatgaa
gaagatgacataaatgctgtgatgaaatgtttaccagacaattcaagtcctttaattgag
tttgcaaatgtttcccagggtattttattacttctgatgttaaaacaacatttgaagaac
ctttgtggattctctgatagtaaaattcagaagtattctccatctgaatctgcaaaagta
tatgataaagcgataaatcggaaaacaggcatccattttcatcctaaacaaaccttagac
ttcctgcggagtgatatgtctaattccaaaattacagaagatgtgaagaggagtatagtt
aaacaatatctagatttcaagctcctcatggaacatttggatcctgatgaagaagaagaa
gaaggggaggtgtcagctagcacaaatgcccggaacaaagcaattacctcactgcttgga
ggaggcagccctaaaaataatgcagctgagacagaagatgatgaaagtgatggggaggat
agaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagactctacagag
ttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatttgctgtcca
aagtacaaagatcgaccacaaattgcaagagtagtacagaaaaccagcaatggcttcagt
gttcagtggatggcaggttcctacagtggctcctggactgaggctaaacgccgtgatggt
cgcaaactggtgccttgggtagacactattaaagagtcagacattatttacaaaaaaatt
gctctaacgagtgctaataagctgactaataaagttgttcagactttacgatcgctgtat
gccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
