Antechinus flavipes (yellow-footed antechinus): 127556834
Help
Entry
127556834 CDS
T08818
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03030
DNA replication
afz03410
Base excision repair
afz03420
Nucleotide excision repair
afz03430
Mismatch repair
afz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127556834
03410 Base excision repair
127556834
03420 Nucleotide excision repair
127556834
03430 Mismatch repair
127556834
03440 Homologous recombination
127556834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afz03032
]
127556834
03400 DNA repair and recombination proteins [BR:
afz03400
]
127556834
Enzymes [BR:
afz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127556834
DNA replication proteins [BR:
afz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
127556834
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
127556834
MMR (mismatch excision repair)
DNA polymerase delta complex
127556834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
127556834
NCBI-ProteinID:
XP_051846249
LinkDB
All DBs
Position
3:632860228..632874962
Genome browser
AA seq
1131 aa
AA seq
DB search
MESKRRPAPSAGLPGAKRPRGGGGSWAEEDEAPASQFEEELALMEEMEAERRLQEQEEEE
LHVPPEGAAMGQLPPSVRDARWLRPAPPALDPQTQALVFQQLEIDHYVGSPLLPPPPGAP
EAAPILRAFGVTQAGVSVCCHIRGFAPYFYVPAPSGFGPEHLGDLQRELNAAVSREQRGG
KELKGPAVLGVELCTRESMYGYLGRGPSPFLRVTLALPRLVAPARRLLENGIRLPGLGSP
SFPPYEANVDFEIRFMVDADIVGCNWIELPAGKYQLRTEGKATLCQLEADVTWSDVVSHP
PEGPWQQIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSVGLRWGEPEPFLRLALTLRP
CAPILGARVLSFEREEELLEAWASFVRTMDPDVITGYNIQNFDLPYLISRAQTLKVSSFP
FLGRISGLRSQIRDSSFQSKQTGRRDSKVVSMTGRVQMDMLQVLLREHKLRSYTLNAVSF
HFLGEQKEDVQHSIITDLQNGNDQSRRRLAVYCLKDALLPLRLLERLMVLVNAVEMARVT
GVPLGYLLTRGQQVKVVSQLLRQAVREGLVMPVVKTEGGEDFTGATVIEPLKGYYDVPIA
TLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTPDEFIKTPTGNEFVKASVRKGLLPQI
LENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCVEISQS
VTGFGRQMIKKTKQLVESKYTVENGYSADAKVVYGDTDSVMCRFGVPSVAEAMALGREAA
DWVSGHFIAPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDSHDKMDCKGLEAVRRDNCPL
VANLVTSSLRRLLIDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA
HVELAERMRKRDPGSAPGLGDRVPYVIISAAKGVAAYMKSEPAHRHPVLLGAAAGKAPAE
DLRAHPGRGPGRGRAATRRAHPLQDGADGQGRGAPGLRHAQEQLHRLPGRPQPPRSRVQV
LPSPGVGAVPEGGSAPERAGGALLAPVDAVPALPGQPARGRALHQPRLPHLLHAQEGAEG
PGRPRAAAGPLRAPRPGLLVTGPLSIKPSRRPPVCFFGGEGGPAAHPRAQE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaagcggcggccggcccccagcgccgggctgcccggggccaagcgcccgcgt
gggggcggcgggtcctgggccgaggaggacgaggcgcccgcgtcccagtttgaggaggag
ctggccctgatggaggagatggaggctgagcggaggctgcaggagcaggaggaggaggag
ctccacgtgccccccgaaggggctgccatggggcagctgcctccgtccgtccgcgacgcc
cgctggctccggcccgccccgccagccctggacccccagacgcaggccctggtctttcag
cagctcgagatcgaccactacgtgggctccccgctgctgccgccgccccccggggccccc
gaagcggctcccatcctccgggccttcggggtcacacaggccggagtctccgtctgctgc
cacatccgcggcttcgccccctatttctacgtgcccgcgccctctggcttcggccccgag
cacctgggggacctgcagcgggagctgaacgccgccgtgagccgggagcagcgcgggggc
aaggagctgaaggggcccgccgtgctgggcgtggagctctgcacccgcgagagcatgtac
ggctacctgggccgcggcccctcgccctttctgcgcgtgaccctggcgctgccgcgcctc
gtggcccccgcccggcgcctgctggagaatggcatccgcctgcccggcctcggctccccc
agcttcccgccctacgaagccaacgtggactttgagatccggttcatggtggacgccgac
atcgttggatgcaattggatcgagctcccggcggggaagtaccagctgcggaccgagggg
aaggccacgctgtgccagctggaggcggacgtgacgtggtcggacgtggtcagccacccc
cccgaggggccctggcagcagatcgcccccctcagggtgctgagcttcgacatcgaatgt
gccgggaggaaaggcatcttcccggagccggagcgggaccccgtgatccagatctgttcc
gtgggcctccgctggggggagccagagcccttcctgcgcctcgccctgaccctgcgcccc
tgcgcccccattctgggggcccgcgtcctcagcttcgagcgcgaagaagagcttctcgag
gcctgggcctccttcgtccgcaccatggaccccgacgtcataacgggctataacatccag
aacttcgacctgccctacctcatctccagggcgcagaccctcaaggtctcgtccttcccc
ttcctgggccggatctccggcctccgctcccagatccgcgactcttccttccagtccaag
cagacgggccggcgagacagcaaagtggtcagcatgacggggcgggtgcagatggacatg
ctgcaggtcttgctgcgggagcacaagctccgctcctacaccctcaacgcggtcagcttc
cacttcctgggggagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaac
gggaacgaccagtcccgccgccgcctggccgtgtactgcctgaaggacgccctcctgccc
ctccggctcctcgagcgcctcatggtcctggtcaacgccgtggagatggccagagtcacg
ggcgtccccctgggctacctgctgacccggggccagcaggtcaaggtcgtgtcccagctc
ctccgccaggcggttcgggagggcctcgtgatgcccgtggtgaagacggagggcggggag
gacttcacgggagccacggtgatcgagcctctgaaagggtactacgacgtccccatcgcc
accctggacttctcctccctgtacccctccatcatgatggcccacaacctgtgctacacg
acgctgctgaggccgggcaccgcgcagaagctgggcctgacccccgacgagttcataaag
accccgacggggaacgagttcgtgaaggcctccgtgaggaaagggctcctgccgcagatc
ttggagaacctgctcagtgcccgcaagagggccaaggccgagctggccaaggagacggac
cccctgcggcggcaggtcctggacgggcggcagctggccctgaaggtcagcgccaactcc
gtctacggcttcaccggggcccaggtcgggaagctgccctgcgtggagatctcccagagt
gtcactggcttcgggcgacagatgatcaagaagaccaagcagctggtggagtccaagtac
acggtggagaacgggtacagcgccgacgccaaggtggtgtacggagacacggactcggtg
atgtgccgtttcggggtcccctcggtggcggaggcgatggcgctgggccgggaggccgcc
gactgggtgtccggccacttcatcgcgcccatccggttagagtttgagaaggtctacttc
ccgtacctcctcatcagcaagaagcgctacgcgggcctcctgttctcctcgcgcccggac
tcccacgacaagatggactgcaaggggctggaggccgtgcgccgggacaactgcccgctc
gtggccaacctggtcacctcctccctgcggcgcctgctcatcgaccgggacccctcgggc
gccgtggcccacgcccaggacgtcatctcggacctgctctgcaaccggatcgacatctcg
cagctggtgatcaccaaggagctgacccgggccgcggccgactacgcggggaagcaggcg
cacgtggagctggccgagaggatgaggaaacgagaccccggcagcgcccccggcctgggg
gaccgagtgccctacgtcatcatcagtgcggccaagggcgtggcggcctacatgaagtca
gagcctgcccatcgacacccagtattacttggagcagcagctggcaaagcccctgctgag
gatcttcgagcccatcctgggcgagggccgggccgaggccgtgctgctacgcggcgagca
cacccgctgcaagacggtgctgacggccaaggtcggggggctcctggccttcgccacgcg
caggagcagctgcatcggctgccgggccgtcctcagccaccacggagccgtgtgcaagtt
ctgccttccccgggagtcggagctgtaccagaaggaggtagcgcacctgagcgcgctgga
ggagcgcttctcgcgcctgtggacgcagtgccagcgctgccagggcagcctgcacgagga
cgtgctctgcaccagccgagactgccccatcttctacatgcgcaagaaggtgcagaagga
cctggacgaccaagagcagctgctggcccgcttcgggccccccggcccggcctcctggtg
acgggcccactgtcaataaagccttctcgcagaccccctgtgtgcttctttgggggggag
ggaggccccgctgcccacccacgggcgcaggagtga
DBGET
integrated database retrieval system
