Antechinus flavipes (yellow-footed antechinus): 127557196
Help
Entry
127557196 CDS
T08818
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127557196
Membrane trafficking [BR:
afz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127557196
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127557196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40
Beta-prop_IFT140_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Synaptobrevin
RAB3GAP2_N
Beta-prop_VPS8
Beta-prop_EML
KNTC1_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
127557196
NCBI-ProteinID:
XP_051846571
LinkDB
All DBs
Position
3:315886714..316317192
Genome browser
AA seq
1141 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSGSSSSGNSGSGTGGGSIQPGGTAGILREEIQETLTSDYFQ
ICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSASSDETLHLWNLRQKRPAILHSLKFNRERSTKTHPGPVVHLSDSPRDEGKLL
IGYENGTVVLWDLKSKRAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRP
FQTTIPHGKSQRDGRKPESCKPILKVEYKTCRNSEPFIIFSGGLAYDKACRRPSLTIMHG
KSITVLEMDHPIVEFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPM
DIHESPVTCTAYFADCPPDLILVLYSIGVKHKKQGYSNKEWPISGGTWNIGAQTYPEIII
TGHADGSIKFWDASAITLQMLYKLKTSKVFEKQKIGDGKQTSEIVEEDPYAVQMIYWCPE
SRIFCVAGVSAYVIVYKFSRHEITTEIVSLEVRLQYDVEDIITPEPETIPPFPDPSSQLP
SSKSLSGSTNTVASEGVTKDSIPCLSVKTRPVRMPPGYQAELVVQLVWVDGEPPQQITSL
TASSAYGIVAFGNCNGLAIVDFMQKTVLLSMGTIDLYRSSDPYQRQPRSPRKNKQFIADN
FCMRGLSNFYPDLTKRIRTSYQSMTELTDSPVPLELERCKSPTSDHVNGHCTSPTSQSCS
SGKRLSSADVSKVNRWGPGRPPFRKAQSAACMEVSLPVTTEESRENSYNRSRSSSISSID
KDSKEAITALYFMESFARKNDMTISPCLWVGTSLGMVLMISFNLPSTDEQRYTEPVLVSP
SGTLLTLKGAVLTFSCMDRLGGLMHPPYEVWRDPNSLDDNEKGKKRKLVMNSPPSSQEMG
DHQYAVVCSEKQAKVFSLPSQTCLYVHNITETSFILQAAVVVMCNSACLACFCANGHIMI
MSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNLQDML
GELFTPVETPEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASKSLAQHIPGSGGIEGV
KGAAGGVMGELTRARIALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQ
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttccgcaaagttttggatggtttaactgcctcatcccctggcagt
ggcagcagcagtagtggtaacagtggcagcgggactggaggtggctccatccagcctgga
gggactgcagggattctcagagaagagatacaggaaaccctaacttcggactacttccaa
atttgcaagacagtccggcatgggtttccttaccagcccacagctttagccttcgatcca
gtccagaaaattttggctattgggacaagaacaggtgctataagaatattgggcaggccc
ggtgttgattgttattgccaacatgaaagtggtgcagcagtactgcaacttcagttttta
ataaatgagggtgctttggtcagtgcaagttcagatgaaacacttcatttatggaacctt
aggcaaaaacggccagccattctacattctcttaaatttaaccgagaacgatccacaaag
acccacccaggtccagttgtacatttaagtgatagtccaagggatgaagggaaactctta
ataggttatgaaaatggaactgtggtgctctgggacttgaaatcaaaaagagcagaactg
agagtttattatgatgaggctattcattcaattgattggcatcatgagggcaaacagttc
atgtgcagccattcagatggcagcttgactctgtggaacctgaaaagtccaagccgtccc
ttccagaccacaattccacatggaaaaagtcagagagatggaagaaagcctgagtcttgt
aaaccaattcttaaagttgagtacaagacctgtaggaacagtgaaccatttataatcttt
tctggtggactggcctatgacaaagcttgtagaagaccaagtttgaccatcatgcatgga
aaatcaatcacagttctcgaaatggatcaccctattgttgagtttctaactctctgtgaa
acaccctatccaaatgaatttcaagaaccttatgctgtagtagtgcttctggagaaagat
ctaattgtagttgacctgacacaaagcaattttccgatctttgaaaatccttatcccatg
gacattcatgaatcaccagttacctgcacagcgtattttgctgactgtcctccggatttg
attctagtactctattcaataggagttaagcataaaaagcaaggatacagcaataaggag
tggccaatcagtggagggacctggaacattggggcacagacatatccagaaattattatt
acaggtcatgcagatggatcaataaagttttgggatgcttctgcaataactctacagatg
ctatacaagttaaaaacatcaaaagtttttgaaaaacagaagataggagatggaaaacaa
acatctgaaattgtagaggaggatccttatgctgtccaaatgatttattggtgtccagag
agcagaatattctgtgtagcaggagtctctgcatatgtcattgtttacaaattcagcagg
catgaaattactactgaaatagtgtcattagaggtacgacttcaatatgatgttgaagat
atcattactcctgaaccagaaacaattcctccgtttccagatccctcttcccagcttcct
tcttcgaagagtctttcagggagtaccaacactgtagctagtgaaggagtgacaaaggac
agtatcccttgcctcagtgttaagacacgacctgttcggatgcctccaggttatcaagca
gaacttgttgttcaattggtgtgggtagatggtgaacctccacaacagatcactagtctc
actgcaagctctgcttatggcattgttgcatttgggaactgcaatggattggctattgtg
gattttatgcagaaaacagtgttgctgagcatgggaaccattgacctatacagatcaagt
gatccataccaaagacagccaagatctcctcgaaagaacaaacagttcattgcagacaac
ttttgcatgcgtggcctgtctaacttttatcctgatttaacgaaacggatccgtacttcc
tatcagagtatgactgagctcactgatagtcctgttcctttggagcttgagcgctgcaag
tctcccacttcagatcatgtaaatggacactgcaccagccctacttctcagagttgcagt
tctggaaaacgtctttctagtgctgatgtttcaaaagtaaatcgctggggtcctggacga
ccaccattccgaaaggcacagtcggctgcttgcatggaagtttctctaccagtcacaaca
gaagaaagccgagaaaactcctataatcgttctagaagttctagtatctccagcattgac
aaagactctaaggaagcaattacagctttatacttcatggaatcctttgcacggaaaaat
gacatgacaatctccccatgtctatgggttggaactagtctgggtatggtgttaatgatc
tcctttaacctgccttcaacagatgaacaaagatatacagagccagtcctggtatctcca
agtggtacattactgacactaaaaggagctgttctaacattttcctgtatggaccgtctg
gggggattaatgcatccaccatatgaagtttggcgggacccaaacagtctggatgataat
gaaaaaggaaaaaaaaggaaacttgtaatgaattccccaccatcttcccaggaaatggga
gatcatcaatacgcagttgtctgctcagaaaaacaagccaaagtcttctcattgccttcc
cagacttgcctttatgttcataacatcacggagacatccttcatattgcaagcagctgtg
gtagtcatgtgtaacagtgcctgtctggcctgcttttgtgccaatggccacatcatgata
atgagcctacctagtctccgcccaatgttggatgttaattatctgcctctaacagatatg
aggatagcacggacattttgttttaccaatgaaggccaagcactatatctcgtctctccc
actgaaatacagcggttgacctacagtcaagaaatgtgcgacaatctacaggacatgcta
ggagaattatttactccagtagaaacacctgaagctcagaacagaggcttcctcaaggga
ctgtttggtggaagtggacaaacatttgacagagaagagttatttggggaggcttcggct
ggaaaggcgtccaagagcctcgcccagcatatccccgggtcgggggggatcgaaggagtc
aaaggagccgccggaggggtgatgggagagctgacgcgcgcgcggatcgccctggacgag
cggggacagcggctgggcgagctcgaggagaagactgccggcatgatgaccagcgcggag
gccttctccaaacacgcgcacgagttgatgctgaaatataaggataagaaatggtaccag
ttttaa
DBGET
integrated database retrieval system
