Antechinus flavipes (yellow-footed antechinus): 127557392
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Entry
127557392 CDS
T08818
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127557392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
afz04091
]
127557392
Lectins [BR:
afz04091
]
C-Type lectins
Lecticans
127557392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
127557392
NCBI-ProteinID:
XP_051846686
LinkDB
All DBs
Position
3:complement(548729225..548949227)
Genome browser
AA seq
3192 aa
AA seq
DB search
MHHGVSRASRTFGIVAVQPATARSVTSRAPWVQLLPWLLLLILSLARCVFAQLESSRSAL
VSLGFSGPSGTPAEEAIVLANRGLRVPFGRAVWLDPLHDLVLQVQPGDRCQVVVLDNDAL
AQLPGHLSPKRFPCDFGPGEVSYSHLGARSPSRDRVRLQLRYDTPSGSVVLPLVLEVEVL
FTQLEIVTRNLPLVVEELLGTSNPLDRRSLEFTYQPETEECRVGILSGLGALPRYGKLLH
YPQALRADRDGGGERELRNPLMMDCSAFLELGVRYLHTAPGRSPNRDWVPMVVELHPKGA
PIGSPSLKREHFQVLVRIRGGIENTPPKPSFVAMMMMEVDQFVLTALTPDMLAAEDSESD
PDLLVFNLTSPFQQGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPAEDSDQERLFELE
LEVVDPEGAASDPFAFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLSGPPGSGSSNLVIS
DEDDLDTVQLEVVAGLQHGHLALLGSPGGGIGARPPGKYFTVAELEAGQVVYQHDDNDGS
LSDNLVLRMVDGGGRHQVQFLFPITLVPVDDQPPVLNANTGLVLAEGDTVPIPPLALSAT
DIDSDDSMILFVLEPPYSATGQLLLRQTQPPRDGEEHSGGPWRQVVDSQKGILYERSVIE
WRQQDIVEGRLFYRHIGPHSPGLGPVIDQFIFRVQDDHDPPNQSGFQKFVLRIHPVDRLP
PEVGSGCPLRMVVQEYQLTPLRKKWLRYTDLDTDDRELRYTVIQPPTDTDENHAPAPLGT
LVLTDNPSVTVTHFTQAQINHHKIAYRPPDQELGVAARVAQFQYRVEDQSGNMVPGTFTF
YLQPVNNQPPEILNTGFTIQERGQHILSETELHATDVDTIATQISFTLTQAPKHGQMQLN
QRKLVVGEFFHLEDIVQGRVTYVHNGDEYPSDSCSIEVSDGLHVVPITLRANVRPIDNEV
PILSLPTGTLGSYLDVLENEAAEITAHVIKGTNEDTDDLMLTFLLENPPLYGEILVNGVP
AEQFSQREILEGSVVYAHTSGEIGPFPKEDSFNLTLSDMSQEWRIGSNIVRGVTVLVTIL
PIDNQAPEVTVGEQFMVVEGDKRVITTSHINAEDIDSPNDDILCTIVTQPASGYVENISP
APGSEKSRAGIAISAFTLKDLKQGHIYYVQSIHKGVEPVEDRFAFRCSDGINFSHRHFFP
IVIIPTNDEQPEMFMREFMVMEGMSLVIDTPILNAADGDIPADDLTFVITRFPSHGHIMN
QLINGTVLVESFTLDQIIESSSIIYEHDDSETQEDSFDIKLTDSKYSVEKRVIILVIPVD
DETPRMTINNGLEIEMGETKIINNKVLMATDLDSEDKSLVYIIRYGPGHGLLQRQRPDGA
VENITLGMNFTQDEVDRNLIQYVHLGQEGIRDLIKFDVTDGINPLIDRYFYVSIGSIDMV
FPDVISKGVSLKEGGRVTLTTDLLSTSDINSPDENLVFSITRAPVRGHLECTDHSGVPIT
SFTQLQLAGNKIYYIHTSDDEVKMDSFEFEVTDGHNSVFRTFRISISDVDNKKPVVTIQN
LVVSESENKLITPFELTVEDRDTPDHLLKFTVIQMPVHGHLMFNNTRPVMVFTKQDLNEN
LISYKHDGTESTEDSFSFTVTDGTHADFYVFPDTVFETRRPQMMKIQVIAVDNSSPQIVV
NKGASTLRILTTGHLGFMITNKILKVEDKDSLHISLKFIVTEAPQHGFLFNLGKGNHSIT
QFTQADIDDMKICYVLREGANATSDSFQFTVEDGGGNKLTNQHFHLNWAWISLEKEYYLV
NEDFKFLDIVLKRRGYLGETSFVSIGTQDGTAKKDRDFKGKAQKQVQFNPGQTTATWRVR
ILSDGEHEQSETFQVVLSEPVMAALEFPAVTTVEIIDPGDESTVFIPQSVYTIEEDVGEL
FIPIKRSGDVSQELMVICYTRQGTATGTVPTSVLSYSDYISRPEDHTSVVRFDKDEQEKM
CRIVIIDDSLHEEAETFHVLLSMPMGGRIGSEFPGAQVTILPDKDDEPTFYFGAVEYSVD
ESAGFVEVCIWRTGTDLSRLSSVMVRSRKSEPSSADAGTDYVGISRNLDFAPGVNMQTLR
VTILDDRGQPILEGIEKFELVLRMPMNAALGEPNKATIFINDSVSDLPKMQFKERVYSGN
ENDGQIVAMIYRSGDIQHRSSVRCYTRQGSAQVMMDFEERPNTDSSIITFLPGETEKPCI
LVLMDDVIYEEEEELRLVLGTPQSESPFGASVGEQNETSIKIRDDADKTIIKLGETKFSV
HEPKGPSQSVIVKIPVLRQGDTSKVSIVRVHTKDGSAVSGEDYHPVSEEIEFKEGETQHI
VEIEVLFDGVREMREAFTVHLKPDENMVAETQVTKAIVYIEEMNSMADVTFPSVPQVVSL
LIYDDIFQIKDSPGPVPGYPVACVTACNPKYSDYEKTGSICASESINDTLTRYRWLVSAP
TGPDGVTSPMKEVDFDTFFTSSKMITLDSIYFQAGSRVQCAARAVNIDGNEGLELMSPIV
TVNREEGLCQPRVPGVVGAEPFSAKLRYTGSEDADYTNLIKLTVTMPHIDGMLPVISTRE
LSNFELTLSPDGTRVGNHKCSNLLDYTEVKTHHGFLTDATRNSEVIGETYPYQYSASIRG
SGTLRFYRNLNLEACLWEFVSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSY
VFHSPVGVGGWQHFDLKSELRLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRISEEGR
LVVNFKTEARFHGLFVLSHPASSTSSVIISADHPGLTFSLRLIRSEPAYNQPVQQWSFVS
DFSVRDYSGTYTVKLIPCTTSPHQEYSLPVICNPREPITFDLDIRFQQVSDPVAAEFSLN
TQMFLLSKKSLWLSDGSMGFGQESDVAFTEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLC
TGADGYVPKYSPSNAEYGCLADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAADDPE
AVLLVKQPGSDGFKVDSTPLFQVSLGREWYIHTIYTVRSKDNTNRGIGKRSVEYQYHSLS
NSGVLRTSTENRKKREARNAPPLAKEIGAENNRGTNIQHIALDRSNKKQIPQREVPLDGI
LPRELNNSNPEVNLITIITGVATGLLTICLIAITVLLLKRKQSSKKKDVPAGSGSSEPMM
PQHRYTSDSSEV
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacggcgtgagcagagcttcaagaactttcgggatcgttgcagtgcagcccgcg
actgcacgctctgtcacctcccgggcaccctgggtgcagctgctgccctggctcttactc
ctaattctgtcactagcgaggtgtgtcttcgctcaacttgaaagttccaggtctgcgcta
gtgtctcttgggttctctgggccatctggtaccccagcagaagaggccatagtgttggcc
aatcgtggactccgggtgccttttggccgcgctgtctggctagaccctctgcatgatctg
gtgctgcaggtacagcctggggatcgctgccaggtggtggtgctggacaacgacgcactg
gctcagctgccgggtcacctcagtcccaagcggtttccctgtgactttggacctggagag
gtgagctactctcatctgggcgcccgcagcccttcaagagaccgagtcagattgcagctg
cgctatgatactcctagtgggtcagtggtgctgcccctggtgctggaagtggaggtactc
tttacccagttggagatagtgaccaggaacttgcccctggtcgtagaggagcttttgggt
actagcaacccgttagatcgccgtagcctggaattcacttaccagccagagacagaggaa
tgcagggtaggcatcctttctgggctgggggctcttcctcgctatgggaaactgcttcat
tatccacaggctctaagagcagacagggacgggggaggggaaagggaactgaggaaccct
ctgatgatggactgcagtgcttttctggaactgggagtgcgatacttgcatacagccccg
ggtcgctccccaaatcgagactgggtgcccatggtcgtggagttgcaccccaaaggtgcc
ccaataggaagcccatctttgaaacgggagcactttcaggtgctggtgaggatccgggga
ggcatagagaacactccacctaagcccagtttcgttgctatgatgatgatggaagtggac
caatttgtgctgactgccctgacaccggacatgttagcagctgaggattctgaatcagac
cctgatttgctagtcttcaatctcacttccccatttcagcagggtcaaggctacttggtg
agcacagatgaccgcagcttacctctgtcttcctttacccaaagagacctgcggctcctc
aaaattgcctaccagcctccagcagaggactctgaccaggagcgtctttttgaactagag
cttgaagtagtagatccagaaggtgcagcctcagatccctttgccttcatggtggttgtg
aaacccatgaacactcttgctcctgtggtcactagaaatactggtcttatcctttatgag
ggccaatcccgccccctcagtggccccccagggagtggatcctccaatctggtcatcagt
gatgaggatgacttggatactgtgcagctggaggtggtggctggccttcagcatgggcat
ttggctctcttgggttcccctggtggaggtattggtgctaggccaccaggaaagtatttc
acagtagctgagctggaagctgggcaggtagtctaccagcatgatgataatgatggctcc
cttagtgataacctggttcttcgaatggtagatggaggaggtcggcatcaggtacaattc
ctctttcccattaccctggtgcctgtggatgaccagccacctgttctcaatgctaatact
ggactggtgctggctgaaggtgatactgttccaattccaccactggctttgagtgccact
gatattgactcagatgactctatgatactttttgtgctggaacccccatactcagcaaca
ggacaattgctactccgccagacccaaccccctagggatggagaggagcattctggaggc
ccctggaggcaagtggtagactctcagaagggtatattgtatgagaggtcagtgatagag
tggaggcagcaagacattgttgaggggagactgttctatcggcacattggtccccacagc
cctggactgggtcctgtcatagaccagttcatcttcagagtccaggatgaccatgatccc
cccaaccaatcaggattccaaaagtttgtgctgcgtattcatcccgtggatcgcttacct
ccagaggtgggcagtggctgtccactgaggatggtggtacaagaataccagcttacccca
ctaagaaagaagtggctgcgctatactgacctggacacagatgaccgagaactgcgctac
actgtgatacagcctcccacagacacagatgaaaatcatgctccagccccattgggcaca
ttggttttgactgataacccttcagttacagtgactcatttcactcaagcccagatcaat
caccacaaaattgcttatagaccaccagaccaggaactgggggtggctgctcgggtagcc
cagttccagtaccgggtagaggaccagtctgggaatatggttccagggacctttactttt
tatctgcagccagtgaataatcaaccccctgagatcctcaatacaggtttcaccatccag
gagaggggccagcacatcctgagtgaaactgagttacatgccactgatgtggacactatt
gctacccagatctccttcactctcactcaggctcccaagcatggtcaaatgcaattaaac
caaaggaagctagtagtgggtgaattctttcacttggaggacattgttcagggcagggtc
acttatgtccacaatggggatgaatatccaagtgatagttgctcaatagaagttagtgat
ggcctccatgtggtacccattaccctcagagcaaatgtacgtccaatagataatgaggta
cccattttgtccttgcctactggtaccctaggttcctatctagatgtgttagaaaatgaa
gctgctgaaatcacagctcatgtaatcaagggtaccaatgaggatactgatgatttgatg
ctaacttttctcctagaaaatcccccactatatggtgaaatcctagtcaatggagtccca
gctgaacagttttcacaaagagagatcctagagggatctgttgtatatgcccacactagt
ggtgaaataggtccatttcccaaagaggattctttcaacctgacattgtcagatatgtct
caggagtggcgtattggtagcaacattgtgcggggagttactgtgttggtgaccattcta
cccattgataatcaagccccagaggtcactgtgggtgagcaatttatggtggtagagggt
gataaaagggtaattaccacttcccatataaatgccgaagatattgattcccctaatgat
gatattttatgtactatagttactcaacctgcttcaggatatgttgaaaatatttcccca
gctccaggctcagagaaatcaagagcaggcatagccatcagtgcattcactctgaaagac
cttaaacagggacatatatattatgtccagagtatacacaagggtgtggaaccagtggaa
gatagatttgcattccgttgttctgatgggattaatttttctcatagacactttttcccc
attgtgatcattccaaccaatgatgaacagccagaaatgtttatgcgagaatttatggtg
atggaaggtatgagtctggttattgatactcccattctcaatgctgctgatggagatatt
cctgcagatgatttgacttttgttattacccgttttccctcccatggtcacatcatgaat
cagttgataaatggtacagttttggtggaaagctttaccttggatcagatcattgagagt
tctagcattatttatgagcatgatgattctgagacccaagaggacagttttgatataaaa
ctaactgatagcaagtattcagtagagaagagggtaatcatattggttattcctgttgat
gatgagactcccagaatgactatcaataatggactagaaattgaaatgggagaaaccaaa
attatcaacaacaaggtattgatggcaactgatttagactctgaagataaaagtttggtt
tatattattcgttatggaccagggcatggcctgttacaaagacaaaggcctgatggtgca
gttgagaacatcacgctgggcatgaattttactcaggatgaagtagacagaaatttaatt
caatatgtgcatttggggcaggaaggtatccgagacctgattaaatttgatgtgactgat
ggaataaatcctctcattgaccgatatttttatgtttccattggtagcattgacatggtt
ttcccagatgtaataagcaagggagtatccttgaaagaaggtggcagggtgacactcaca
acagacttactgagcaccagtgacatcaacagtccagatgaaaatttagtttttagcatc
accagggcccctgtgaggggtcacttggagtgtacagatcactcaggagtgcctatcacc
tctttcacccagcttcagcttgcagggaacaaaatttactacattcacacatctgatgat
gaggtgaaaatggatagctttgagtttgaagttactgatggacataactctgtctttcgt
actttccggatctctattagtgatgtagacaacaagaagccagtagtcactattcaaaat
ctggtggtgagtgaaagtgaaaataagctaatcactccttttgaactcactgtagaagac
agagatactcctgatcatctcctgaaattcactgtcattcaaatgcctgttcatggtcat
cttatgttcaataataccagacctgttatggtcttcaccaaacaggacctgaatgaaaat
ttgatcagctataaacatgatgggacagaatcaactgaagatagcttttcattcactgtg
actgatggcacacatgctgatttctatgtttttcctgacactgtatttgaaacaagaaga
cctcaaatgatgaaaatccaggtcattgctgtagacaacagctcacctcaaatagtggtg
aacaaaggtgcctccacccttcgcatcttgacaactggacatttaggtttcatgattaca
aacaaaatactgaaagtggaagacaaggacagtttgcacatttccctcaagttcattgtg
acagaagccccacaacacggctttctcttcaacctggggaaaggcaatcacagcatcact
cagtttacacaagctgatattgatgacatgaaaatatgctatgtcttaagagaaggggct
aatgccacaagtgatagtttccagtttacagttgaagatggtggaggaaacaaattgaca
aaccaacattttcacctgaattgggcatggatctccttggaaaaagaatactacctggtc
aatgaagacttcaaatttttggatattgtcctcaaacgaagaggttatttgggagaaact
tcttttgtcagtattggcacacaagatggtacagcaaaaaaagacagagacttcaaagga
aaggcacagaaacaagtacaatttaacccaggtcaaaccacagccacatggcgagtgcga
attctgagtgatggtgaacatgaacagtcggaaaccttccaggtggtgctatcggagcct
gtcatggctgctttagaattccctgctgtgacaacagtggagattattgacccaggagat
gaatcaactgtctttattcctcagtctgtctacaccattgaagaagatgttggtgaattg
ttcattcccatcaaaagaagtggagatgtgagccaagaattaatggtgatctgctacact
cgacaaggaactgcaacagggactgtccctacatctgtgctctcctattctgattacata
tccaggcctgaggatcataccagtgttgtccgatttgacaaagatgaacaggagaaaatg
tgccgaattgttattattgacgactctttgcatgaagaggctgaaacatttcacgttctg
ctgagcatgcccatgggtggaagaattggttcagagttcccaggggctcaggttacgatt
ctccctgacaaagatgatgagccaactttctactttggtgctgttgagtactctgttgat
gagagtgctggatttgttgaagtatgcatctggagaactggtactgatctctcaaggctt
tctagtgtcatggtgagatctcggaaaagtgagccctcatctgcagatgctggaactgac
tatgtggggatcagtcgtaatttagattttgcacctggagttaacatgcaaactctccga
gtcactattctggatgatcgaggacaaccaatattagaaggaattgagaaatttgaatta
gtattacgtatgcctatgaatgctgcccttggagaacccaacaaagccacaatttttatt
aatgattcagtctctgatttgcctaagatgcaatttaaagaacgtgtatacagtgggaat
gaaaatgatggccagattgttgccatgatatataggagtggggatatccaacataggtcg
tcagtgagatgctacactcgacaaggatctgcgcaagtaatgatggactttgaagaacgt
ccaaacacagacagttccattatcacattccttcctggtgagactgaaaagccctgtatt
cttgtattgatggatgatgtgatctatgaagaagaagaagaattacgtctagttcttggt
actccacaaagtgaatccccttttggagcttcagttggtgaacaaaatgaaacttcgata
aagatccgagatgatgctgataagacaattattaagcttggagaaaccaaatttagtgtc
catgaaccaaagggaccaagtcaatcagtcattgtgaaaattcctgtgcttcgccaagga
gacacttcaaaggtttccattgtgagagtacatacaaaagatggctctgctgtctcagga
gaagactatcaccccgtgtcagaagaaattgaatttaaggagggtgaaacccagcatatt
gttgagattgaagtactctttgatggagtcagagagatgagagaagccttcactgttcac
ctgaagcctgatgaaaacatggtagctgagacacaggtgaccaaagccattgtgtacata
gaagaaatgaacagcatggcagatgttactttcccttctgtgcctcaagttgtgtccctt
ttgatatatgatgacattttccaaattaaagacagccctggcccagtgcctggctatcct
gtggcttgtgttacagcttgcaaccccaaatattctgattatgagaagacaggctccata
tgcgcaagtgagagtatcaatgacactttgactagataccgatggcttgttagtgcaccc
acaggccctgatggtgtgaccagccccatgaaagaagtggattttgacaccttttttaca
tcctctaagatgatcactttggattccatttactttcaagctggttccagagtacagtgt
gcagctagagctgtgaacattgatggaaatgaaggactggaactaatgagcccaatcgtc
actgtgaacagagaggaaggtctttgtcagcctcgggtgccaggtgtggtcggtgcagaa
ccattctcagccaaattgcgttatacgggctctgaagatgcagattacacaaatctcatc
aagcttactgtcacaatgccccacattgatggtatgctccccgtgatctccactagagag
ctgtccaactttgagctgactctcagccctgatggcacaagagttgggaaccacaagtgc
tccaacctcctggattacactgaagtaaagactcatcatggcttcttgactgatgctacc
agaaactcagaagtgattggagagacatatccttaccaatacagtgcatccatcaggggt
tctggaaccttgagattctaccgcaaccttaatctggaagcctgcttatgggaatttgtc
agctactatgatatgtctgagctccttacagactgtggaggcaccattgggacagatggg
caggttctgaatctagtgcagtcctatgtcacactgcgagttccgctctatgtttcctat
gttttccattcccctgttggtgtgggaggatggcaacattttgacctgaagtctgagctt
cgactaacttttgtgtatgatactgccatcttgtggaatgatggaattggcagtccacca
gaagcagagctccaaggttccctttatccaaccagcatgcgcatcagtgaggaaggacgt
ttggtggtaaacttcaagacagaagctcgatttcatggtttatttgtgttgtcccatcct
gcatcttccacaagctctgtgatcatctcagctgatcatcctggcctgactttttctctc
cgccttataaggagtgaaccagcatataaccaaccagtccagcaatggagctttgtttct
gacttttcggtcagggactattcaggaacttatactgtgaaacttataccatgtacaacc
tctccacatcaggaatacagcttaccagtgatttgtaaccctagagagccaatcacattt
gacctggacatccgatttcagcaggtcagtgaccctgtggcagcagagtttagcctgaac
acacaaatgtttctcctatccaagaagagtctctggctatctgatggatcaatgggattt
gggcaggagagtgatgttgcttttacagaaggtgacatcatttatggtcgagtaatggtg
gatcctgtgcagaacctgggtgattctttctactgtagcattgagaaagtgtttctatgt
actggagctgatggatatgtacctaaatatagtccaagtaatgctgaatatggatgctta
gcagactctccctctctcctgtatagatttaaaattgtggacaaagctcaacctgagacc
caagccactagttttggaaatgtcctgttcaatgccaaacttgctgcagatgatcctgaa
gcagttctcttggttaagcagcctggatctgatggatttaaagttgactccacgccacta
tttcaagtgtcccttggcagggaatggtacatacatacaatctatacagtcagatcaaaa
gacaatactaaccgaggtattggaaaaaggagtgtggaataccagtaccactctctatca
aattctggggtcctgagaacatccacagagaacagaaagaaaagagaggccagaaatgct
ccaccacttgccaaggaaattggggctgaaaataaccgagggacaaacatccagcacata
gccctggaccgttccaacaagaagcagatcccccaaagagaagttcctttggatggaatt
cttcccagggagttgaacaatagcaaccctgaagtaaacctcatcacaattatcacaggt
gtggccactggcctgcttaccatttgtctaattgcaattactgtactgctgctaaagagg
aaacagagctccaaaaagaaggatgtcccagcaggatcagggagcagtgaaccaatgatg
ccccagcacaggtacactagcgacagctcagaggtttga
DBGET
integrated database retrieval system
