Antechinus flavipes (yellow-footed antechinus): 127557697
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Entry
127557697 CDS
T08818
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127557697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127557697
03019 Messenger RNA biogenesis [BR:
afz03019
]
127557697
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127557697
RNA polymerase I system
127557697
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
127557697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
Spt5-NGN
KOW
Spt5_N
KOWx_SPT5
KOW1_SPT5
SH3_KIN17_C
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
127557697
NCBI-ProteinID:
XP_051846962
LinkDB
All DBs
Position
3:complement(635793888..635796260)
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AA seq
790 aa
AA seq
DB search
MEKNEDREKEENGKEQKENEEEEEEEEEDEEEEERPRKKPRHHGFILDEAEEDDDEEEEE
EAEWEVGAEDIVDREGLPGPDSHEANPQEDCSGARRLQNAWRDQREEELAQYFMQKYATP
ASREAGRGAPRQPPDHIAQQRLLPGIRDPKLWMVKCKVGQEKSTALTLLRKFAASCFSDS
PLQIQSVVAPEYLKGYVYVEAHKLCHVLNAIQGVASLRRGCRDPKPVPIGEMTDVLKVLR
RQAPSLQPGSWVRVRAGLYKGDLAQVTRSEPGNAAVFLKMIPRIHYSRGTPTPGFPKRKR
LPRPPQKLLDTQKIRSLGGKLSRDGDFLLFRGDHYSTEGFLFKTFPLLALVTEGVSPTLS
ELQHFKKRPEALQGLELDDEGAVERRFGTGDKVRVCAGDLINLRGRVVGVQGPNITVMPE
HELLREPLQLPAGELRKHFEVGEHVRVLAGRYRGTTGFILKVEPNFVLLLSDLGREELKV
LRGDLRLCPDTAALEDVWGRHRWGEMVQLSPSTVGVVVGLDADVLRVLDMQDQVVTVPRQ
AITARKDNRLAMALDSQQNNVQVRESVRVVEGPRSGLEATVLYLFRGITFLRSRTLTEHG
GLFACKCKYLLVASPAQSSQGPGLSAGGLTLGPSPYPTSPRQPGPAGRGRGTFESTSARG
PGPGSRGWWGRGSRGPGSWGHSDHHPHKGLLGQSVRICQGSYKGYIGLVKDVREGVARVE
LHSTCQTIFVHLQRLTPVGASSQELWPSDLDTPTSSSSQTPTYGCNSDSYSPIQAGGAWD
PSVGNTPSCP
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatgaagacagggagaaagaggagaacggaaaggagcagaaggaaaacgag
gaggaagaagaggaggaggaggaagatgaggaagaggaagagcggcccaggaagaagccc
agacaccacggcttcattttagatgaggctgaagaggacgatgacgaagaagaggaggag
gaagccgagtgggaggtcggcgcagaggacatagtggacagagaggggctccccggcccg
gacagccatgaagccaacccccaggaggactgctccggggcgcggcgcctccagaacgcc
tggagggatcagcgggaggaggagttggcccagtattttatgcagaaatacgccaccccc
gcgtcccgggaggccgggcgcggagccccgcggcagcctccggaccacatcgcccagcag
aggctgctccccggaatccgggaccccaagctgtggatggtcaagtgcaaggtagggcag
gaaaagtccacggccctgacactcctgcgcaagttcgcggcctcctgcttcagtgacagc
cccctgcagatccagtccgttgtggctcccgagtacctcaagggctatgtctatgtggag
gcccacaagctctgccacgtactgaatgccatccagggcgtggccagcctgcgccggggc
tgccgggacccgaagccggtgcccattggggagatgacagacgtgctgaaggtgctgcgg
cgccaggcccccagcctgcagcctgggagctgggtgcgcgtcagggcgggcctctacaag
ggcgacctcgctcaggtgacccgctccgagcccggcaacgccgcggtcttcctcaagatg
atccctcgcatccactacagccgcgggaccccgacaccaggcttccccaagaggaagcgg
ctccccaggccgccccagaagctcttggacacacagaagatccgatccctgggaggaaag
ctgtccagggacggagacttcctcctcttccggggggaccactacagcaccgagggcttc
ctcttcaagactttccccttgttggccctggtcaccgagggcgtcagccccacgctctct
gagctgcagcacttcaagaaacgccccgaagccctgcaagggcttgagctggacgacgag
ggggctgtcgagcgccgctttggaaccggcgacaaggtgagagtgtgcgcgggcgacctc
atcaacctgcggggccgggtggtgggcgtgcaaggccccaacatcaccgtgatgcccgag
cacgagctgctccgggagccgctgcagctgccggcgggggagctgcgtaagcacttcgag
gtgggggagcacgtccgggtgctggcgggccgctaccggggcaccaccggcttcatcctc
aaagtcgagcccaactttgtcctgctcctgtccgacctcggccgggaggagctcaaggtg
ctccgcggggacctgcgcctgtgcccagacacagcggcccttgaggacgtgtggggccgg
caccgctggggagagatggtgcagctgagccccagcactgtgggcgtagtcgtgggcctg
gacgctgatgtcctgcgggtcctggacatgcaggatcaggtggtcacggtgccccgtcaa
gccatcactgccaggaaggacaaccggctggccatggccctggacagtcagcagaacaat
gtccaagtccgggaatcggtcagggtggtggagggcccgcgctcggggctcgaggctaca
gtcctctatctcttccggggaatcaccttcctccgctccaggacgctcacggagcacggg
ggcctgttcgcctgcaagtgcaaatatctcttggtggccagcccggcccagtccagccag
ggtcccggtctctctgcagggggcctgactctgggcccgagcccttaccccaccagtccc
agacagcctggcccagcagggcgggggcgcgggacgtttgagagtaccagtgccaggggg
ccaggcccgggctcacgtggctggtggggtcgcggctccaggggcccgggctcctggggc
cacagcgaccaccacccacacaagggcctcctgggccaatcagtgcgcatctgccagggg
tcctacaaggggtacatcgggctggtaaaggatgtgagagaaggcgtggcccgtgtggag
ctgcattccacctgtcagaccattttcgtccacctgcagagactcacccccgtgggcgcc
tcgagtcaggaactctggccttcagacttggatactcccaccagctctagctcccaaaca
cccacctacggctgcaactcagacagttatagtccaatccaagcgggtggagcttgggac
cccagtgtaggcaacaccccctcctgcccatag
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